Identifying KLF14 as a potential regulatory factor in liver regeneration trough transcriptomic and metabolomic
Chang Liu,
No information about this author
Dalong Zhu,
No information about this author
Junlong Xue
No information about this author
et al.
Scientific Reports,
Journal Year:
2025,
Volume and Issue:
15(1)
Published: March 3, 2025
Liver
regeneration
is
a
complex
process
crucial
for
recovery
after
partial
hepatectomy
(PH)
or
ex-vivo
liver
resection
and
autotransplantation
(ELRA).
This
study
aimed
to
explore
the
molecular
mechanisms
involved
in
by
analyzing
peripheral
blood
samples
from
three
patients
with
alveolar
echinococcosis
undergoing
PH
ELRA.
Peripheral
were
collected
ELRA
at
time
points:
pre-operation,
postoperative
day
1,
5,
as
well
healthy
controls.
Transcriptomic
analysis
was
performed
identify
differentially
expressed
genes
(DEGs)
using
RNA
sequencing,
while
metabolomic
conducted
untargeted
liquid
chromatography-mass
spectrometry
(LC-MS).
Key
findings
validated
through
real-time
quantitative
polymerase
chain
reaction
(RT-qPCR)
Western
blot
analysis.
revealed
3574
DEGs
on
post-operative
1
compared
pre-operation
group,
3269
5
1.
In
1619
identified
896
found
Among
these,
36
common
shared
between
both
groups,
primarily
enriched
metabolic
pathways.
Integration
of
genes,
co-expression
network
Mfuzz
clustering
KLF14
gene
correlated
processes,
its
association
PI3K-AKT
pathway.
Metabolomic
highlighted
metabolites
associated
lipid,
amino
acid,
energy
metabolism.
provides
new
insights
into
regulation
regeneration,
identifying
processes.
These
offer
potential
therapeutic
targets
enhancing
repair.
Language: Английский
Integrative Analysis of Arachidonic Acid Metabolism in the Pathogenesis and Immune Dysregulation of Psoriasis
Mengyi Hou,
No information about this author
Yanting Sun
No information about this author
Clinical Cosmetic and Investigational Dermatology,
Journal Year:
2025,
Volume and Issue:
Volume 18, P. 601 - 615
Published: March 1, 2025
Psoriasis
is
a
chronic
inflammatory
skin
disorder
with
complex
molecular
mechanisms.
While
previous
studies
have
demonstrated
altered
levels
of
arachidonic
acid
and
its
metabolites
in
psoriatic
lesions,
the
specific
roles
metabolism
(AAM)
genes
pathogenesis
immune
dysregulation
psoriasis
remain
poorly
understood.
This
study
aimed
to
investigate
role
AAM
using
an
integrative
bioinformatics
approach.
Gene
expression
data
from
patients
healthy
controls
were
obtained
Expression
Omnibus
database
analyzed.
Differentially
expressed
identified,
functional
enrichment
analyses
performed.
Weighted
gene
co-expression
network
analysis
(WGCNA)
machine
learning
techniques
employed
identify
associated
genes.
Single-sample
set
(ssGSEA)
cell
composition
conducted
explore
implications.
Transcription
factor
prediction
was
performed
potential
regulators
key
Differential
revealed
469
dysregulated
psoriasis,
highlighting
involvement
epidermis
development,
response,
inflammation.
WGCNA
approaches
identified
ABCC1,
PLA2G3,
CYP2J2,
GPX2
as
ssGSEA
showed
elevated
inflammation
response
correlating
pathways.
Immune
increased
infiltration
cells
skin.
shared
transcription
factors
for
genes,
suggesting
coordinated
regulation
their
psoriasis.
dysregulation,
providing
novel
insights
into
basis
The
findings
highlight
therapeutic
targets
biomarkers,
which
could
lead
improved
diagnosis
treatment
strategies
this
disorder.
Language: Английский
Comprehensive Analysis of Nigella sativa (L.) Pharmacology: A Multi-Method Approach with ICP, HPLC-DAD, in Vitro, in Vivo, and in Silico Techniques
Otmane Zouirech,
No information about this author
Assia Houiat,
No information about this author
Rafik El-Mernissi
No information about this author
et al.
Journal of Molecular Structure,
Journal Year:
2025,
Volume and Issue:
unknown, P. 142182 - 142182
Published: March 1, 2025
Language: Английский
Differential Gene and Protein Expressions Responsible for Vasomotor Signaling Provide Mechanistic Bases for the Opposite Flow-Induced Responses of Pre- and Post-Circle of Willis Arteries
Life,
Journal Year:
2025,
Volume and Issue:
15(6), P. 856 - 856
Published: May 26, 2025
Increases
in
flow
elicit
dilations
the
basilar
artery
(BA)
supplied
by
posterior
cerebral
circulation
(PCC),
and
ensuring
efficient
blood
supply
to
circle
of
Willis
which
pressure
can
distribute
equalize,
thus
provide
appropriate
for
daughter
branches
reach
certain
brain
areas.
In
contrast,
increases
constrictions
middle
(MCA),
anterior
(ACC)
regulating
distal
circulation.
Mediators
flow-dependent
responses
include
arachidonic
acid
(AA)
metabolites
nitric
oxide
(NO).
We
hypothesized
that
mediators
are
differentially
expressed
arteries
PCC
(CAPCC)
ACC
(CAACC).
The
expressions
key
enzymes
AA
pathway—cyclooxygenases
(COX1/COX2),
cytochrome
P450
hydroxylases
(Cyp450),
thromboxane
synthase
(TXAS),
A2
(TP)
receptor,
prostacyclin
(PGIS),
(IP)
receptor
(IP);
neuronal
(nNOS),
endothelial
(eNOS)—in
BA
MCA
from
rats
(n
=
20)
were
determined
western
blotting.
Transcriptome
analysis
CAPCC
CAACC
25)
was
assessed
RNA
sequencing.
compared
MCA,
COX1/2
Cyp450
protein
lower,
PGIS
higher,
TXAS
nNOS/eNOS
similar,
TP
receptors
IP
higher.
Gene
vasodilator
canonical
pathways
higher
CAPCC;
vasoconstriction
CAACC.
vasomotor
signaling
circulation,
corresponding
their
function.
Language: Английский