Genes,
Journal Year:
2023,
Volume and Issue:
14(9), P. 1795 - 1795
Published: Sept. 13, 2023
We
propose
a
computational
framework
for
selecting
biologically
plausible
genes
identified
by
clustering
of
multi-omics
data
that
reveal
patients'
similarity,
thus
giving
researchers
more
comprehensive
view
on
any
given
disease.
employ
spectral
similarity
network
created
fusion
three
networks,
based
mRNA
expression
immune
genes,
miRNA
and
DNA
methylation
data,
using
SNF_v2.1
software.
For
each
cluster,
we
rank
features,
ensuring
the
best
separation
between
clusters,
select
top-ranked
features
preserve
clustering.
To
find
targeted
miRNAs
found
in
use
chromosome-conformation
capture
miRNet2.0
software,
respectively.
identify
informative
these
combined
sets
target
are
analyzed
terms
their
enrichment
somatic/germline
mutations,
GO
biological
processes/pathways
known
considered
to
be
important
relation
disease,
as
recorded
Molecular
Signature
Database
from
GSEA.
The
protein-protein
interaction
(PPI)
networks
were
hubs
PPI
networks.
used
Cancer
Genome
Atlas
patients
with
acute
myeloid
leukemia
demonstrate
our
approach,
discuss
findings
context
results
literature.
International Journal of Molecular Sciences,
Journal Year:
2024,
Volume and Issue:
25(16), P. 8621 - 8621
Published: Aug. 7, 2024
Inflammation
is
activated
by
diverse
triggers
that
induce
the
expression
of
cytokines
and
adhesion
molecules,
which
permit
a
succession
molecules
cells
to
deliver
stimuli
functions
help
immune
system
clear
primary
cause
tissue
damage,
whether
this
an
infection,
tumor,
or
trauma.
During
inflammation,
short-term
changes
in
secretion
strong
mediators
inflammation
occur,
while
long-term
occur
specific
groups
cells.
Long-term
include
cellular
transdifferentiation
for
some
types
need
regenerate
damaged
tissue,
as
well
death
can
be
detrimental
integrity
if
they
remain
active
beyond
boundaries
essential
function.
The
transcriptional
regulator
NFκB
enables
fundamental
gene
during
development.
recurrence
malignant
disease,
cell
stress-induced
alterations
enable
growth
cancer
clones
are
substantially
resistant
therapeutic
intervention
system.
A
number
those
due
significant
defects
feedback
signal
cascades
control
activity
NFκB.
Specifically,
stress
contributes
it
overrides
modules
otherwise
protect
host
tissue.
involved
both
suppression
promotion
cancer,
key
distinctive
feature
determines
its
net
effect
remains
unclear.
This
paper
aims
provide
answer
at
least
one
aspect
question,
namely
mechanism
divergent
response
critical
inflammatory
general.
Journal of Cellular and Molecular Medicine,
Journal Year:
2024,
Volume and Issue:
28(19)
Published: Oct. 1, 2024
Acute
myeloid
leukaemia
(AML)
remains
a
major
unmet
medical,
despite
recent
progress
in
targeted
molecular
therapies.
One
aspect
of
leukaemic
cell
resistance
to
chemotherapy
is
the
development
clones
with
increased
capacity
respond
cellular
stress
and
production
reactive
oxygen
species
(ROS),
thanks
particular
high
aldehyde
dehydrogenases
(ALDH)
1A1/2
activity.
At
diagnosis,
ROS
level
ALDH1A1/2
activity
AML
patients
BM
are
correlated
different
ELN
2022
prognostic
groups
overall
survival
(OS).
A
significant
lower
was
observed
favourable
ELN2022
subgroup
compared
intermediate
adverse
group
(p
<
0.01).
In
same
way,
levels
were
significantly
0.0001)
0.0002).
Proteomes,
Journal Year:
2025,
Volume and Issue:
13(1), P. 11 - 11
Published: Feb. 17, 2025
Acute
myeloid
leukemia
(AML)
is
an
aggressive
bone
marrow
malignancy
that
can
be
cured
only
by
intensive
chemotherapy
possibly
combined
with
allogeneic
stem
cell
transplantation.
We
compared
the
pretreatment
proteomic
profiles
of
AML
cells
derived
from
50
patients
at
time
first
diagnosis
normal
CD34+
cells.
A
comparison
based
on
all
and
populations
identified
121
differentially
abundant
proteins
showed
least
2-fold
differences,
these
included
several
markers
neutrophil
differentiation
(e.g.,
TLR2,
integrins
ITGM
ITGX,
downstream
mediators
including
RHO
GTPase,
S100A8,
S100A9,
S100A22).
However,
expression
varied
between
patients,
a
subset
28
was
characterized
increased
long-term
AML-free
survival,
signs
differentiation,
favorable
genetic
abnormalities.
These
two
main
patient
subsets
(28
versus
22
fewer
differentiation)
also
differed
regard
to
phosphorylation
16
proteins.
Furthermore,
we
classified
our
their
involved
in
regulation
iron
metabolism/ferroptosis
showing
differential
when
comparing
Among
less
prognosis,
could
then
identify
genetically
heterogeneous
adverse
prognosis
(i.e.,
death
primary
resistance/relapse)
protein
profile
similarities
conclude
differ
cells;
especially,
differences
reflecting
are
associated
risk
relapse
after
conventional
therapy.
Oncology Letters,
Journal Year:
2025,
Volume and Issue:
29(5), P. 1 - 17
Published: March 4, 2025
The
expression
of
cytosolic
aldehyde
dehydrogenases
(ALDHs),
which
mediate
the
last
step
in
pathway
synthesis
all‑trans
retinoic
acid,
is
dysregulated
various
types
human
cancer,
and
has
been
associated
with
development
cancer
stem
cells
(CSCs)
solid
tumors
hematological
malignancies.
CSCs
are
considered
a
minor
fraction
capacity
to
initiate
neoplastic
tumors.
ALDH1A1
serves
crucial
role
emergence
CSC
phenotype,
induces
malignant
behavior
promotes
treatment
resistance.
Notably,
ALDH1A1‑induced
therapy
resistance
not
exclusive
just
one
group
drugs,
but
affects
diverse
drugs
that
use
different
mechanisms
kill
cells.
This
diversity
drug
resistance‑inducing
effects
stemness‑supporting
functions
ALDH1A1.
inhibition
activity
using
chemicals
or
depletion
via
genetic
approaches,
such
as
small
interfering
RNA,
can
overcome
pathways
In
context
breast
it
critical
only
expected
manifest
stem‑like
features,
include
increased
From
angle
disease
prognosis,
extent
association
remains
be
determined
through
application
cutting‑edge
methods
detect
tracked
biomarkers
within
Genes,
Journal Year:
2023,
Volume and Issue:
14(9), P. 1807 - 1807
Published: Sept. 16, 2023
It
has
been
previously
shown
that
the
aldehyde
dehydrogenase
(ALDH)
family
member
ALDH1A1
a
significant
association
with
acute
myeloid
leukemia
(AML)
patient
risk
group
classification
and
AML
cells
lacking
expression
can
be
readily
killed
via
chemotherapy.
In
past,
however,
redundancy
between
activities
of
subgroup
members
ALDH
hampered
search
for
conclusive
evidence
to
address
role
specific
genes.
Here,
we
describe
bioinformatics
evaluation
all
nineteen
genes
as
prospective
actionable
targets
development
methods
aimed
improve
treatment.
We
implicate
in
recurrent
AML,
show
from
family,
ALDH2
have
strongest
classification.
Furthermore,
discover
sum
values
RNA
genes,
ALDH2,
stronger
survival
than
either
one
gene
alone
does.
conclusion,
identify
treatment
high-risk
patients.
Substances
inhibit
both
enzymatic
constitute
potentially
effective
pharmaceutics.
It
has
been
previously
shown
that
aldehyde
dehydrogenase
(ALDH)
family
member
ALDH1A1
a
significant
association
with
acute
myeloid
leukemia
(AML)
patient
risk
group
classification,
and
AML
cells
lacking
expression
can
be
readily
killed
by
chemotherapy.
In
the
past,
however,
redundancy
between
activities
of
subgroup
members
ALDH
hampered
conclusive
evidence
for
addressing
role
specific
genes.
We
here
describe
bioinformatics
evaluation
all
nineteen
genes
as
prospective
actionable
targets
development
methods
aimed
to
improve
treatment.
implicate
in
recurrent
AML,
we
show
from
family,
ALDH2
have
strongest
classification.
Furthermore,
discover
sum
values
RNA
stronger
classification
survival
than
either
one
gene
alone.
conclusion,
identify
treatment
high
patients.
Substances
inhibit
both
enzymatic
constitute
potentially
effective
pharmaceutics.
Cancers,
Journal Year:
2023,
Volume and Issue:
16(1), P. 148 - 148
Published: Dec. 28, 2023
8-oxoguanine
glycosylase
1
(OGG1),
which
was
initially
identified
as
the
enzyme
that
catalyzes
first
step
in
DNA
base
excision
repair
pathway,
is
now
also
recognized
a
modulator
of
gene
expression.
What
important
for
cancer
OGG1
acts
NFκB-driven
Specifically,
oxidant
stress
cell
transiently
halts
enzymatic
activity
substrate-bound
OGG1.
The
stalled
facilitates
binding
transactivators,
such
NFκB
to
their
cognate
sites,
enabling
expression
cytokines
and
chemokines,
with
ensuing
recruitment
inflammatory
cells.
Recently,
we
highlighted
chief
aspects
involvement
regulation
expression,
hold
significance
lung
development.
However,
has
been
implicated
molecular
underpinning
acute
myeloid
leukemia.
This
review
analyzes
discusses
how
these
cells
adapt
through
redox-modulated
intricate
connections,
via
interaction
NFκB,
provides
malignant
alternative
pathways
transform
microenvironment,
adjustment,
promoting
proliferation,
metastasis,
evading
killing
by
therapeutic
agents.
8-oxoguanine
glycosylase
1
(OGG1),
which
was
initially
identified
as
the
enzyme
that
catalyzes
first
step
in
DNA
base
excision
repair
pathway,
is
now
known
also
a
modulator
of
gene
expression.
What
important
for
cancer,
OGG1
acts
NFκB-driven
Specifically,
oxidant
stress
cell
transiently
halts
enzymatic
activity
substrate-bound
OGG1.
The
stalled
facilitates
binding
transactivators,
including
NFκB,
to
their
cognate
sites
enable
expression
cytokines
and
chemokines,
with
ensuing
recruitment
inflammatory
cells.
Recently,
we
highlighted
chief
aspects
involvement
regulation
expression,
have
significance
lung
cancer
development.
However,
has
been
implicated
molecular
underpinning
acute
myeloid
leukemia.
In
general,
capacity
cells
adapt
oxidative
depends
on
systems
such
interface
bestows
mechanism
transformation
its
microenvironment
adaptation
survival
malignant
clones.