Genome-Wide Identification of GATA Transcription Factors in Acorus and Expression Patterns Under Abiotic Stress DOI Creative Commons
Liang Ma, Cheng‐Yuan Zhou,

C. S. Gong

et al.

Horticulturae, Journal Year: 2025, Volume and Issue: 11(4), P. 410 - 410

Published: April 11, 2025

The GATA transcription factors are a class of DNA-binding proteins that control the expression target genes by binding to promoter regions DNA, thereby affecting growth and development plants. In recent years, have been discovered functionally characterized in many plant species. However, there is limited annotation information for genus Acorus. This study identified 38 20 Acorus calamus A. gramineus, respectively. Based on phylogenetic tree, they were classified into four subfamilies (I, II, III, IV). At same time, an analysis domain motifs revealed domains relatively conserved across all subfamilies. A multiple sequence alignment showed almost highly at LCNACG site. An cis-elements, collinearity, protein–protein interaction networks provided insights response mechanisms under biotic stress. Additionally, we found significant changes gramineus drought salt These results provide useful future functional analyses contribute better understanding stress molecular breeding directions

Language: Английский

Genome-Wide Identification of GATA Transcription Factors in Acorus and Expression Patterns Under Abiotic Stress DOI Creative Commons
Liang Ma, Cheng‐Yuan Zhou,

C. S. Gong

et al.

Horticulturae, Journal Year: 2025, Volume and Issue: 11(4), P. 410 - 410

Published: April 11, 2025

The GATA transcription factors are a class of DNA-binding proteins that control the expression target genes by binding to promoter regions DNA, thereby affecting growth and development plants. In recent years, have been discovered functionally characterized in many plant species. However, there is limited annotation information for genus Acorus. This study identified 38 20 Acorus calamus A. gramineus, respectively. Based on phylogenetic tree, they were classified into four subfamilies (I, II, III, IV). At same time, an analysis domain motifs revealed domains relatively conserved across all subfamilies. A multiple sequence alignment showed almost highly at LCNACG site. An cis-elements, collinearity, protein–protein interaction networks provided insights response mechanisms under biotic stress. Additionally, we found significant changes gramineus drought salt These results provide useful future functional analyses contribute better understanding stress molecular breeding directions

Language: Английский

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