Comparative miRNome and transcriptome analyses reveal the expression of novel miRNAs in the panicle of rice implicated in sustained agronomic performance under terminal drought stress DOI
Simardeep Kaur, Karishma Seem, Naveen Duhan

et al.

Planta, Journal Year: 2024, Volume and Issue: 259(6)

Published: April 19, 2024

Language: Английский

Mechanisms of Plant Epigenetic Regulation in Response to Plant Stress: Recent Discoveries and Implications DOI Creative Commons
Mukhtar Iderawumi Abdulraheem,

Yani Xiong,

Abiodun Yusuff Moshood

et al.

Plants, Journal Year: 2024, Volume and Issue: 13(2), P. 163 - 163

Published: Jan. 7, 2024

Plant stress is a significant challenge that affects the development, growth, and productivity of plants causes an adverse environmental condition disrupts normal physiological processes hampers plant survival. Epigenetic regulation crucial mechanism for to respond adapt stress. Several studies have investigated role DNA methylation (DM), non-coding RNAs, histone modifications in responses. However, there are various limitations or challenges translating research findings into practical applications. Hence, this review delves recent recovery, implications, applications epigenetic response To better understand under stress, we reviewed published last 5-10 years made contributions, analyzed novel techniques technologies advanced field, such as next-generation sequencing genome-wide profiling modifications. We emphasized breakthrough uncovered specific genes pathways potential implications understanding agriculture, crop improvement, sustainability. Finally, concluded holds immense significance its mechanisms tolerance can revolutionize breeding genetic engineering strategies, leading evolution stress-tolerant crops ensuring sustainable food production face climate change other challenges. Future field will continue unveil intricacies improvement.

Language: Английский

Citations

42

Epigenome editing for targeted DNA (de)methylation: a new perspective in modulating gene expression DOI
Karishma Seem, Simardeep Kaur, Suresh Kumar

et al.

Critical Reviews in Biochemistry and Molecular Biology, Journal Year: 2024, Volume and Issue: 59(1-2), P. 69 - 98

Published: March 3, 2024

Traditionally, it has been believed that inheritance is driven as phenotypic variations resulting from changes in DNA sequence. However, this paradigm challenged and redefined the contemporary era of epigenetics. The methylation, histone modification, non-coding RNA biogenesis, chromatin remodeling play crucial roles genomic functions regulation gene expression. More importantly, some these are inherited to next generations a part epigenetic memory significant sum total all bases, proteins, ncRNA biogenesis constitutes epigenome. Continuous progress deciphering regulations existence heritable epigenetic/epiallelic associated with trait interest enables deploy epigenome editing tools modulate methylation marks can be utilized for manipulation Initially, genome/epigenome technologies relied on zinc-finger protein or transcriptional activator-like effector protein. discovery clustered regulatory interspaced short palindromic repeats CRISPR)/deadCRISPR-associated 9 (dCas9) enabled more specific/efficient targeted (de)methylation. One major concerns off-target effects, wherein may unintentionally modify gene/regulatory element which cause unintended change/harmful effects. Moreover, germline cell raises several ethical/safety issues. This review focuses recent developments tools/techniques, technological limitations, future perspectives emerging technology therapeutics human diseases well plant improvement achieve sustainable developmental goals.

Language: Английский

Citations

15

The role of priming and memory in rice environmental stress adaptation: Current knowledge and perspectives DOI Creative Commons
Showkat Ahmad Ganie,

Nancy McMulkin,

Alessandra Devoto

et al.

Plant Cell & Environment, Journal Year: 2024, Volume and Issue: 47(5), P. 1895 - 1915

Published: Feb. 15, 2024

Abstract Plant responses to abiotic stresses are dynamic, following the unpredictable changes of physical environmental parameters such as temperature, water and nutrients. Physiological phenotypical stress intercalated by periods recovery. An earlier can be remembered ‘stress memory’ mount a response within generation or transgenerationally. The priming’ phenomenon allows plants respond quickly more robustly stressors increase survival, therefore has significant implications for agriculture. Although evidence memory in various plant species is accumulating, understanding mechanisms implicated, especially crops agricultural interest, its infancy. Rice major food crop which susceptible causing constraints on cultivation yield globally. Advancing network will thus have impact rice sustainable production global security face climate change. Therefore, this review highlights effects priming tolerance focuses specific aspects memory, perpetuation regulation at epigenetic, transcriptional, metabolic well physiological levels. open questions future directions exciting research field also laid out.

Language: Английский

Citations

13

Drought Stress Tolerance in Rice: Physiological and Biochemical Insights DOI Creative Commons

Aysha Siddika Jarin,

Md. Moshiul Islam,

Al Rahat

et al.

International Journal of Plant Biology, Journal Year: 2024, Volume and Issue: 15(3), P. 692 - 718

Published: July 21, 2024

Rice (Oryza sativa L.), an important food crop, necessitates more water to complete its life cycle than other crops. Therefore, there is a serious risk rice output due water-related stress. Drought stress results in morphological changes, including the inhibition of seed germination, reduced seeding growth, leaf area index, flag area, increased rolling, as well decrement yield traits, such plant height, biomass, number tillers, and 1000-grain yield. Stress also causes formation reactive oxygen species (ROS) O2−, H2O2, OH−, which promote oxidative plants cause damage. The process degradation owing produces cell damage reduction nutrient intake, photosynthetic rate, RWC, WUE, stomatal closure, may be responsible for transpiration rate dry matter under decreasing soil moisture. Plants have ability produce antioxidant that can either enzymatic (SOD, POD, CAT, GPX, APX) or non-enzymatic (AsA, GSH) nature overcome During drought, several biochemical osmoprotectants, like proline, polyamines, sugars, accumulated, enhance drought tolerance rice. To meet demands ever-growing population with diminishing resources, it necessary crop varieties are highly adapted environments, involve adopting some mitigation strategies. This study aims assess varying morphological, physiological, responses various methods alleviating

Language: Английский

Citations

7

Epigenetic Modifications of Hormonal Signaling Pathways in Plant Drought Response and Tolerance for Sustainable Food Security DOI Open Access
Cengiz Kaya, Ferhat Uğurlar, Ioannis‐Dimosthenis S. Adamakis

et al.

International Journal of Molecular Sciences, Journal Year: 2024, Volume and Issue: 25(15), P. 8229 - 8229

Published: July 28, 2024

Drought significantly challenges global food security, necessitating a comprehensive understanding of plant molecular responses for effective mitigation strategies. Epigenetic modifications, such as DNA methylation and histone are key in regulating genes hormones essential drought response. While microRNAs (miRNAs) primarily regulate gene expression post-transcriptionally, they can also interact with epigenetic pathways potential effectors that influence chromatin remodeling. Although the role miRNAs memory is still being explored, their contribution to response requires examining these indirect effects on modifications. A aspect this exploration drought-adapted plants, offering insights into transgenerational inheritance adaptive traits. Understanding mechanisms govern maintenance erasure imprints provides nuanced how plants balance stability flexibility epigenomes. major focus dynamic interaction between hormonal pathways—such those abscisic acid (ABA), ethylene, jasmonates, salicylic (SA)—and mechanisms. This interplay crucial fine-tuning during stress, leading physiological morphological adaptations enhance resilience. review highlights transformative advanced technologies, bisulfite sequencing CRISPR-Cas9, providing water deficit conditions. These technologies pave way developing drought-tolerant crops, which vital sustainable agriculture.

Language: Английский

Citations

5

The Current Relationship Between Ultraviolet-B Radiation Stress and Drought Stress in Rice: An Avenue for Developing Multiple Resistant Crops DOI
Gideon Sadikiel Mmbando

Deleted Journal, Journal Year: 2025, Volume and Issue: 77(1)

Published: Jan. 3, 2025

Ultraviolet‑B (UV-B) radiation and drought are two environmental stresses that significantly reduce rice quality, yield, growth. Nevertheless, there currently few studies on the association between stress UV‑B stress. This review examined complex interactions stress, with an emphasis cumulative impact these have crop. The looks at how responds to a physiological, biochemical, molecular level, emphasizing shared signaling pathways defense mechanisms. According much literature, simultaneous exposure can synergistic effects intensify damage or cause particular adaptive reactions. Through integration of biotechnological methods advanced breeding techniques, offers strategies for developing cultivars resilient both radiation.

Language: Английский

Citations

0

Deciphering the Role of Epigenetics in Plant Pathogen Resistance: Strategies for Sustainable Sugarcane Management DOI Creative Commons

Faisal Mehdi,

Yuan-li Wu,

Shuzhen Zhang

et al.

Plant Stress, Journal Year: 2025, Volume and Issue: unknown, P. 100754 - 100754

Published: Jan. 1, 2025

Language: Английский

Citations

0

Epigenetics Regulation of Abiotic Stress in Crop Plants DOI

Hemant Dasila,

Damini Maithani,

Pragati Srivastava

et al.

Published: Jan. 1, 2025

Language: Английский

Citations

0

Adaptability of rice to different planting methods: A proof of cumulative transcriptional memory DOI
Karishma Seem,

Ayantika Ghosh,

R. K. Varshney

et al.

Plant Gene, Journal Year: 2025, Volume and Issue: unknown, P. 100515 - 100515

Published: April 1, 2025

Language: Английский

Citations

0

Epigenetic Modifications in Genome Help Remembering the Stress Tolerance Strategy Adopted by the Plant DOI Creative Commons
Suresh Kumar,

Trilochan Mohapatra

Frontiers in Bioscience-Landmark, Journal Year: 2024, Volume and Issue: 29(3)

Published: March 22, 2024

Genetic information in eukaryotic organisms is stored, replicated, transcribed, and inherited through the nucleus of a cell. Epigenetic modifications genetic material, including DNA methylation, histone modification, changes non-coding RNA (ncRNA) biogenesis, chromatin architecture play important roles determining genomic landscape regulating gene expression. Genome (structural features chromatin, affected by epigenetic modifications) major driver functions/activities. Segregation euchromatin (transcriptionally active) from heterochromatin repressed chromosome) positioning genes specific nuclear space cells emphasise non-randomness organization information. Not only does base sequence carry but covalent bases, three-dimensional genome, loops are vital for switching on/off its expression during growth/environmental stress. The dynamics depend on activities writers erasers under changing environmental conditions. discovery RNAs (one players de novo methylation DNA), increased protein (guide demethylase), monitoring (that helps keep balance between demethylation methylation) have been some new developments era epigenomics. To respond to stimuli, plants modulating different mechanisms biochemical, molecular, genetic, alterations. Studies might provide better insights into stress memory molecular bases adaptability enable (epi)genome editing crops climate resilience sustainable agriculture present multifaceted change.

Language: Английский

Citations

3