The Three-Dimensional Structure of the Genome of the Dark Septate Endophyte Exophiala tremulae and Its Symbiosis Effect on Alpine Meadow Plant Growth DOI Creative Commons
Chu Wu, Junjie Fan, Die Hu

et al.

Journal of Fungi, Journal Year: 2025, Volume and Issue: 11(4), P. 246 - 246

Published: March 24, 2025

The establishment of artificial grassland is a good pathway for resolving serious social and economic problems in the Qinghai–Tibet Plateau. Some beneficial indigenous microbes may be used to improve productivity grassland. genome dark septate fungus, Exophiala tremulae CICC2537, was sequenced assembled at chromosome level using PacBio sequencing platform, with assistance Hi-C technique scaffolding, its 3D structures were investigated. size E. 51.903848 Mb, it contains eight chromosomes. A total 12,277 protein-coding genes predicted, 11,932 (97.19%) annotated. As distribution exon intron number gene GC CDS GC, showed similar patterns other investigated members genus Exophiala. analysis carbohydrate-active enzymes that possesses greatest auxiliary activities lowest carbohydrate-binding modules among fungi. candidate effector proteins 3337, out which cytoplasmic apoplastic made up 3100 163, respectively. whole contained 40 compartment 76 Bs, there no significant difference content Bs. predicted contain 155 topologically associating domains (TADs), their average length 250,000 bp, but differences numbers per bin localized within boundaries interiors TADs. Comparative diverged from mesophila about 34.1 (30.0–39.1) Myr ago, calicioides 85.6 (76.1–90.6) ago. Compared all fungi, contraction expansion families 13 89, respectively, 14 670, Our work provides basis use fungus alpine further research into symbiosis mechanisms, growth plant species

Language: Английский

New and Interesting Pine-Associated Hyphomycetes from China DOI Creative Commons
Wenhui Tian, Yan Jin,

Yue-Chi Liao

et al.

Journal of Fungi, Journal Year: 2024, Volume and Issue: 10(8), P. 546 - 546

Published: Aug. 3, 2024

Pine trees play a crucial role in the forests of Sichuan Province, boasting rich species diversity and lengthy evolutionary history. However, research investigation on fungi associated with pine are insufficient. This study investigated hyphomycetes China. During survey, we collected five specimens from branches bark Pinus. Five barcodes were selected for sequenced, including ITS, SSU, LSU, TEF1, RPB2. Morphological examination multi-locus phylogenetic analyses revealed three new species, viz. Catenulostroma pini sp. nov. within Teratosphaeriaceae, Kirschsteiniothelia longisporum Kirschsteiniotheliaceae, Sporidesmiella sichuanensis Junewangiaceae, two known Paradictyoarthrinium diffractum P. hydei Paradictyoarthriniaceae, which host records Pinus species. pini, distinguished other genus by its unique morphology, has conidial morphologies: small terminal helicoconidia, scolecoconidia many septa, phragmoconidia conidia. longer spores when compared to genus. According analysis, formed an independent clade sister S. aquatica juncicola, differences size.

Language: Английский

Citations

4
Two new species of ectoparasitic microfungi within the Hesperomyces virescens complex from Algeria, Italy, and Malaysia DOI Creative Commons
Warre Van Caenegem, Aicha Merzoug, Piotr Ceryngier

et al.

Mycological Progress, Journal Year: 2025, Volume and Issue: 24(1)

Published: Jan. 14, 2025

Language: Английский

Citations

0
Four novel Fusarium species from Brazil DOI
Ana Carla da Silva Santos, Sheila Karine Belo Pedroso, Renan do Nascimento Barbosa

et al.

Mycological Progress, Journal Year: 2025, Volume and Issue: 24(1)

Published: Jan. 15, 2025

Language: Английский

Citations

0
Catalogue of fungi in China 6: Rhytismataceae on twigs of Rhododendron DOI Creative Commons
Mei-Jun Guo, Lan Zhuo, Shi-Juan Wang

et al.

Mycology&#58 An International Journal on Fungal Biology, Journal Year: 2025, Volume and Issue: unknown, P. 1 - 53

Published: Feb. 19, 2025

Citations

0
The Three-Dimensional Structure of the Genome of the Dark Septate Endophyte Exophiala tremulae and Its Symbiosis Effect on Alpine Meadow Plant Growth DOI Creative Commons
Chu Wu, Junjie Fan, Die Hu

et al.

Journal of Fungi, Journal Year: 2025, Volume and Issue: 11(4), P. 246 - 246

Published: March 24, 2025

The establishment of artificial grassland is a good pathway for resolving serious social and economic problems in the Qinghai–Tibet Plateau. Some beneficial indigenous microbes may be used to improve productivity grassland. genome dark septate fungus, Exophiala tremulae CICC2537, was sequenced assembled at chromosome level using PacBio sequencing platform, with assistance Hi-C technique scaffolding, its 3D structures were investigated. size E. 51.903848 Mb, it contains eight chromosomes. A total 12,277 protein-coding genes predicted, 11,932 (97.19%) annotated. As distribution exon intron number gene GC CDS GC, showed similar patterns other investigated members genus Exophiala. analysis carbohydrate-active enzymes that possesses greatest auxiliary activities lowest carbohydrate-binding modules among fungi. candidate effector proteins 3337, out which cytoplasmic apoplastic made up 3100 163, respectively. whole contained 40 compartment 76 Bs, there no significant difference content Bs. predicted contain 155 topologically associating domains (TADs), their average length 250,000 bp, but differences numbers per bin localized within boundaries interiors TADs. Comparative diverged from mesophila about 34.1 (30.0–39.1) Myr ago, calicioides 85.6 (76.1–90.6) ago. Compared all fungi, contraction expansion families 13 89, respectively, 14 670, Our work provides basis use fungus alpine further research into symbiosis mechanisms, growth plant species

Language: Английский

Citations

0