Clinical Applications of Circulating Tumor DNA Profiling in GI Cancers DOI
Francesca Battaglin, Heinz‐Josef Lenz

JCO Oncology Practice, Journal Year: 2024, Volume and Issue: 20(11), P. 1481 - 1490

Published: Nov. 1, 2024

Over the next few years, analysis of circulating tumor DNA (ctDNA) through liquid biopsy is expected to enter clinical practice and revolutionize approach biomarker testing treatment selection in GI cancers. In fact, growing evidence support use ctDNA as a noninvasive, effective, highly specific tool for molecular profiling Analysis blood has been investigated multiple settings including early detection, minimal residual disease evaluation, diagnosis evaluation prognostic/predictive biomarkers targeted selection, longitudinal monitoring response, identification resistance mechanisms. Here, we review applications, advantages, limitations precision oncology

Language: Английский

Phenotyping Tumor Heterogeneity through Proteogenomics: Study Models and Challenges DOI Open Access
Diletta Piana, Federica Iavarone, Elisa De Paolis

et al.

International Journal of Molecular Sciences, Journal Year: 2024, Volume and Issue: 25(16), P. 8830 - 8830

Published: Aug. 14, 2024

Tumor heterogeneity refers to the diversity observed among tumor cells: both between different tumors (inter-tumor heterogeneity) and within a single (intra-tumor heterogeneity). These cells can display distinct morphological phenotypic characteristics, including variations in cellular morphology, metastatic potential variability treatment responses patients. Therefore, comprehensive understanding of such is necessary for deciphering tumor-specific mechanisms that may be diagnostically therapeutically valuable. Innovative multidisciplinary approaches are needed understand this complex feature. In context, proteogenomics has been emerging as significant resource integrating omics fields genomics proteomics. By combining data obtained from Next-Generation Sequencing (NGS) technologies mass spectrometry (MS) analyses, aims provide view heterogeneity. This approach reveals molecular alterations features related subtypes, potentially identifying therapeutic biomarkers. Many achievements have made; however, despite continuous advances proteogenomics-based methodologies, several challenges remain: particular limitations sensitivity specificity lack optimal study models. review highlights impact on characterizing phenotypes, focusing critical current its use clinical preclinical models characterization.

Language: Английский

Citations

3

Liquid Biopsy versus CT: Comparison of Tumor Burden Quantification in 1065 Patients with Metastases DOI
Lama Dawi, Younes Belkouchi, Littisha Lawrance

et al.

Radiology, Journal Year: 2024, Volume and Issue: 313(2)

Published: Nov. 1, 2024

Tumor fraction at liquid biopsy was weakly correlated with the total tumor volume contrast-enhanced CT and did not accurately reflect burden CT.

Language: Английский

Citations

3

Routine molecular applications and recent advances in breast cancer diagnostics DOI Creative Commons
Gabriella Pankotai-Bodó, Orsolya Oláh‐Németh,

Farkas Sükösd

et al.

Journal of Biotechnology, Journal Year: 2023, Volume and Issue: 380, P. 20 - 28

Published: Dec. 19, 2023

Cancer stands as one of the most common and lethal diseases, imposing a substantial burden on global mortality rates. Breast cancer is distinct from other forms in which it primary cause death for women. Early detection breast can significantly lower risk mortality, improving prognosis those who are affected. The rate has been steadily rising, according to epidemiological data, especially since COVID-19 pandemic. This emphasizes necessity sensitive precise technologies that be utilized early diagnosis. In this process, biomarkers play pivotal role by facilitating diagnosis cancer. Currently, wide variety have identified, accuracy These applied liquid biopsies well solid tissues. context cancer, particularly valuable determining predisposed disease, predicting at time diagnosis, selecting best course therapy. review comprehensively explores recently developed gene-based biofluids used conventional cutting-edge techniques employed

Language: Английский

Citations

8

Decoding the Dynamics of Circulating Tumor DNA in Liquid Biopsies DOI Open Access
Khadija Shahab Turabi, Kelsey Klute, Prakash Radhakrishnan

et al.

Cancers, Journal Year: 2024, Volume and Issue: 16(13), P. 2432 - 2432

Published: July 1, 2024

Circulating tumor DNA (ctDNA), a fragment of found in the bloodstream, has emerged as revolutionary tool cancer management. This review delves into biology ctDNA, examining release mechanisms, including necrosis, apoptosis, and active secretion, all which offer information about state nature tumor. Comprehensive profiling been enabled by methods such whole genome sequencing methylation analysis. The low abundance ctDNA fraction makes alternative techniques, digital PCR targeted next-generation exome sequencing, more valuable accurate for mutation detection. There are numerous clinical applications analysis, non-invasive liquid biopsies minimal residual disease monitoring to detect recurrence, personalized medicine therapy identification, early detection, real-time evaluation therapeutic response. Integrating analysis routine practice creates promising avenues successful care, from diagnosis treatment follow-up.

Language: Английский

Citations

2

Clinical Applications of Circulating Tumor DNA Profiling in GI Cancers DOI
Francesca Battaglin, Heinz‐Josef Lenz

JCO Oncology Practice, Journal Year: 2024, Volume and Issue: 20(11), P. 1481 - 1490

Published: Nov. 1, 2024

Over the next few years, analysis of circulating tumor DNA (ctDNA) through liquid biopsy is expected to enter clinical practice and revolutionize approach biomarker testing treatment selection in GI cancers. In fact, growing evidence support use ctDNA as a noninvasive, effective, highly specific tool for molecular profiling Analysis blood has been investigated multiple settings including early detection, minimal residual disease evaluation, diagnosis evaluation prognostic/predictive biomarkers targeted selection, longitudinal monitoring response, identification resistance mechanisms. Here, we review applications, advantages, limitations precision oncology

Language: Английский

Citations

2