The Thin Line between Pathogenicity and Endophytism: The Case of Lasiodiplodia theobromae DOI Creative Commons
Maria Michela Salvatore, Anna Andolfi, Rosario Nicoletti

и другие.

Agriculture, Год журнала: 2020, Номер 10(10), С. 488 - 488

Опубликована: Окт. 21, 2020

Many fungi reported for endophytic occurrence are better known as plant pathogens on different crops, raising questions about their actual relationships with the hosts and other plants in biocoenosis factors underlying lifestyle shift. This paper offers an overview of Lasiodiplodia theobromae (Dothideomycetes, Botryosphaeriaceae), a species to be able colonize many both endophyte pathogen. Prevalently spread tropical subtropical areas, there concerns that it may propagate temperate region following global warming increasing trade materials. The state art concerning biochemical properties strains this is also examined reference range biotechnological applications.

Язык: Английский

Balance between community assembly processes mediates species coexistence in agricultural soil microbiomes across eastern China DOI Open Access
Shuo Jiao, Yunfeng Yang,

Yiqin Xu

и другие.

The ISME Journal, Год журнала: 2019, Номер 14(1), С. 202 - 216

Опубликована: Окт. 14, 2019

Язык: Английский

Процитировано

798

Current insights into fungal species diversity and perspective on naming the environmental DNA sequences of fungi DOI Creative Commons
Bing Wu, Muzammil Hussain, Weiwei Zhang

и другие.

Mycology&#58 An International Journal on Fungal Biology, Год журнала: 2019, Номер 10(3), С. 127 - 140

Опубликована: Май 7, 2019

The global bio-diversity of fungi has been extensively investigated and their species number estimated. Notably, the development molecular phylogeny revealed an unexpected fungal diversity utilisation culture-independent approaches including high-throughput amplicon sequencing dramatically increased operational taxonomic units. A novel taxa new divisions, classes, orders families have established in last decade. Many cryptic were identified by phylogeny. Based on recently generated data from culture-dependent -independent survey same samples, earth estimated to be 12 (11.7–13.2) million compared 2.2–3.8 a variety estimation techniques. Moreover, it speculated that current use techniques would reveal even higher than our estimation. Recently, formal classification environmental sequences permission DNA sequence as names' type proposed but strongly objected mycologist community. Surveys unusual niches indicated many previously regarded "unculturable fungi" could cultured certain substrates under specific conditions. sequencing, shotgun metagenomics single-cell genomics powerful means detect taxa. Here, we propose separate types into physical based specimen, genome (gDNA) complete culturable uncluturable specimen digital data. gDNA should priority, while can temporal supplementary before being available. name "digital type" assigned "clade" + name. genus, family or order, etc. which affiliates to. Facilitating future cultivation efforts encouraged. Also, with advancement knowledge inhabiting various environments mostly because rapid detection technologies, more information expected for planet.

Язык: Английский

Процитировано

311

A critical review on exploiting the pharmaceutical potential of plant endophytic fungi DOI
Shubhpriya Gupta, Preeti Chaturvedi, Manoj G. Kulkarni

и другие.

Biotechnology Advances, Год журнала: 2019, Номер 39, С. 107462 - 107462

Опубликована: Окт. 24, 2019

Язык: Английский

Процитировано

287

Soil multitrophic network complexity enhances the link between biodiversity and multifunctionality in agricultural systems DOI
Shuo Jiao, Yahai Lu, Gehong Wei

и другие.

Global Change Biology, Год журнала: 2021, Номер 28(1), С. 140 - 153

Опубликована: Окт. 7, 2021

Belowground biodiversity supports multiple ecosystem functions and services that humans rely on. However, there is a dearth of studies exploring the determinants biodiversity-ecosystem function (BEF) relationships, particularly in intensely managed agricultural ecosystems. Here, we reported significant positive relationships between soil organism groups 228 fields, relating to crop yield, nutrient provisioning, element cycling, pathogen control. The were influenced by types organisms phylotypes with larger sizes or at higher trophic levels, for example, invertebrates protist predators, appeared exhibit weaker no BEF when compared those smaller lower archaea, bacteria, fungi, phototrophs. Particularly, highlighted role network complexity, reflected co-occurrence patterns among multitrophic-level organisms, enhancing link functions. Our results represent advance forecasting impacts belowground multitrophic on systems, suggest complexity should be considered key factor productivity sustainability under land-use intensification.

Язык: Английский

Процитировано

266

Phyllosphere epiphytic and endophytic fungal community and network structures differ in a tropical mangrove ecosystem DOI Creative Commons
Hui Yao, Xiang Sun, Chao He

и другие.

Microbiome, Год журнала: 2019, Номер 7(1)

Опубликована: Апрель 9, 2019

Revealing the relationship between plants and fungi is very important in understanding biodiversity maintenance, community stability, ecosystem functioning. However, differences network structures of phyllosphere epiphytic endophytic are currently poorly documented. In this study, we examined fungal communities associated with leaves six mangrove species using Illumina MiSeq sequencing internal transcribed spacer 2 (ITS2) sequences.A total 635 operational taxonomic units (OTUs) were obtained at a 97% sequence similarity level; they dominated by Dothideomycetes Tremellomycetes. Plant identity had significant effect on OTU richness fungi, but not fungi. The composition was significantly different, plant greater than Network analysis showed that both characterized highly specialized modular lowly connected anti-nested properties. Furthermore, higher levels specialization modularity lower connectance stronger anti-nestedness network.This study reveals differ, has These findings demonstrate role host driving structure.

Язык: Английский

Процитировано

233

The microbiota of the grapevine holobiont: A key component of plant health DOI Creative Commons
Pauline Bettenfeld,

Jasmine Cadena i Canals,

Lucile Jacquens

и другие.

Journal of Advanced Research, Год журнала: 2021, Номер 40, С. 1 - 15

Опубликована: Дек. 22, 2021

Grapevine is a woody, perennial plant of high economic importance worldwide. Like other plants, it lives in close association with large numbers microorganisms. Bacteria, fungi and viruses are structured communities, each individual can be beneficial, neutral or harmful to the plant. In this sense, microorganisms interact regulate functions (including immunity) even provide new ones. Thus, grapevine associated its microbial communities constitutes supra-organism, also called holobiont, whose functioning linked established plant-microorganism interactions. The overall health may conditioned by diversity structure communities. Consequently, an optimal composition will consist balance allowing healthy. Conversely, imbalance populations could lead (or generated by) decline microbiome active component host responsive biotic abiotic changes; that respect, better understanding most important drivers microbiomes needed. This article presents current state art about microbiota according compartments influencing factors. We focus on situations imbalance, particular during disease decline. Finally, we discuss possible interest engineering agrosystem such as viticulture.

Язык: Английский

Процитировано

113

Uniting the Role of Endophytic Fungi against Plant Pathogens and Their Interaction DOI Creative Commons

Shazia Akram,

Ayesha Ahmed,

Pengfei He

и другие.

Journal of Fungi, Год журнала: 2023, Номер 9(1), С. 72 - 72

Опубликована: Янв. 3, 2023

Endophytic fungi are used as the most common microbial biological control agents (MBCAs) against phytopathogens and ubiquitous in all plant parts. Most of fungal species have roles a variety pathogens. Fungal endophytes provide different services to be pathogen agents, using an important aspect form enhanced growth induced systemic resistance, produce antifungal secondary metabolites (lipopeptides, antibiotics enzymes) through colonization, compete with other pathogenic microorganisms for factors (space nutrients). The purpose this review is highlight potential properties We focused on introduction, biology, isolation, identification endophytic fungi, their activity endosymbionts developed specific genes that exhibited behavior demonstrated defensive responses pathogens such antibiosis, parasitism, lytic enzyme competition, siderophore production, indirect by resistance (ISR) host plant. Finally, microscopic detection techniques study interactions (endophytic interactions) plants briefly discussed.

Язык: Английский

Процитировано

103

Do all fungi have ancestors with endophytic lifestyles? DOI
Chitrabhanu S. Bhunjun, Chayanard Phukhamsakda, Kevin D. Hyde

и другие.

Fungal Diversity, Год журнала: 2023, Номер 125(1), С. 73 - 98

Опубликована: Март 16, 2023

Язык: Английский

Процитировано

61

Current trends, limitations and future research in the fungi? DOI Creative Commons
Kevin D. Hyde, Petr Baldrián, Yanpeng Chen

и другие.

Fungal Diversity, Год журнала: 2024, Номер 125(1), С. 1 - 71

Опубликована: Март 20, 2024

Abstract The field of mycology has grown from an underappreciated subset botany, to a valuable, modern scientific discipline. As this study grown, there have been significant contributions science, technology, and industry, highlighting the value fungi in era. This paper looks at current research, along with existing limitations, suggests future areas where scientists can focus their efforts, mycology. We show how become important emerging diseases medical discuss trends potential drug novel compound discovery. explore phylogenomics, its potential, outcomes address question phylogenomics be applied fungal ecology. In addition, functional genomics studies are discussed importance unravelling intricate mechanisms underlying behaviour, interactions, adaptations, paving way for comprehensive understanding biology. look research building materials, they used as carbon sinks, biocircular economies. numbers always great interest often written about estimates varied greatly. Thus, we needs order obtain more reliable estimates. aspects machine learning (AI) it mycological research. Plant pathogens affecting food production systems on global scale, such, needed area, particularly disease detection. latest data High Throughput Sequencing if still gaining new knowledge same rate before. A review nanotechnology is provided addressed. Arbuscular Mycorrhizal Fungi addressed acknowledged. Fungal databases becoming important, therefore provide major databases. Edible medicinal huge medicines, especially Asia prospects discussed. Lifestyle changes (e.g., endophytes, pathogens, and/or saprobes) also extremely trend special issue Diversity.

Язык: Английский

Процитировано

38

Challenges and update on fungal endophytes: classification, definition, diversity, ecology, evolution and functions DOI Creative Commons
Chun-Fang Liao, Mingkwan Doilom,

Rajesh Jeewon

и другие.

Fungal Diversity, Год журнала: 2025, Номер unknown

Опубликована: Март 5, 2025

Язык: Английский

Процитировано

3