Decellularized
matrices
derived
from
diseased
tissues/organs
have
evolved
in
the
most
recent
years,
providing
novel
research
perspectives
for
understanding
disease
occurrence
and
progression
accurate
pseudo
models
developing
new
treatments.
Although
decellularized
matrix
maintaining
native
composition,
ultrastructure,
biomechanical
characteristics
of
extracellular
(ECM),
alongside
intact
perfusable
vascular
compartments,
facilitates
construction
bioengineered
organ
explants
vitro
promotes
angiogenesis
tissue/organ
regeneration
vivo,
availability
healthy
tissues
organs
preparation
ECM
materials
is
limited.
In
this
paper,
we
review
advancements
matrices.
Considering
that
current
focuses
on
cancers
fibrotic
(mainly
kidney,
lungs,
liver),
pathological
characterizations
applications
these
are
mainly
discussed.
Additionally,
a
contrastive
analysis
between
matrices,
along
with
development
3D
models,
discussed
paper.
And
last,
provided
challenges
future
directions
review.
Deep
comprehensive
will
promote
in-depth
exploration
source
tissue
engineering
field,
thus
ideas
clinical
transformation.
Redox Biology,
Год журнала:
2024,
Номер
71, С. 103102 - 103102
Опубликована: Фев. 23, 2024
Peroxidasin
(PXDN)
is
a
secreted
heme
peroxidase
that
catalyzes
the
oxidative
crosslinking
of
collagen
IV
within
extracellular
matrix
(ECM)
via
intermediate
hypobromous
acid
(HOBr)
synthesis
from
hydrogen
peroxide
and
bromide,
but
recent
findings
have
also
suggested
alternative
ECM
protein
modifications
by
PXDN,
including
incorporation
bromide
into
tyrosine
residues.
In
this
work,
we
sought
to
identify
major
target
proteins
for
bromination
HOBr
or
PXDN-mediated
oxidation
in
mouse
teratocarcinoma
PFHR9
cells.
We
detected
61
bromotyrosine
(BrY)-containing
peptides
representing
23
HOBr-modified
cells,
among
which
laminins
displayed
most
prominent
incorporation.
Moreover,
found
laminin
α1,
β1,
tubulointerstitial
nephritis
antigen-like
(TINAGL1)
contained
BrY
untreated
depended
on
PXDN.
extended
these
analyses
lung
tissues
both
healthy
mice
with
experimental
fibrosis,
obtained
human
subjects.
Analysis
ECM-enriched
tissue
extracts
showed
83
were
elevated
bleomycin-induced
included
various
collagens
laminins,
Similarly,
mRNA
expression
PXDN
α/β1
enhanced
fibrotic
tissues,
bone-marrow-derived
macrophages
fibroblasts
stimulated
transforming
growth
factor
profibrotic
factor.
identified
11
BrY-containing
proteins,
α2,
VI
TINAGL1,
although
relative
extent
was
not
significantly
increased
during
fibrosis.
Finally,
7
again
TINAGL1.
Altogether,
work
demonstrates
presence
several
bromotyrosine-modified
likely
involving
even
normal
suggesting
potential
biological
function
modifications.
Expert Opinion on Therapeutic Targets,
Год журнала:
2025,
Номер
unknown
Опубликована: Фев. 22, 2025
Introduction
Idiopathic
pulmonary
fibrosis
(IPF)
is
a
chronic,
progressive
interstitial
lung
disease
with
dismal
prognosis.
While
the
standard-of-care
(SOC)
drugs
approved
for
IPF
represent
significant
advancement
in
antifibrotic
therapies,
they
primarily
slow
progression
and
have
limited
overall
efficacy
many
side
effects.
Consequently,
remains
condition
high
unmet
medical
pharmacological
needs.
Abstract
Airway
remodeling
is
a
critical
pathological
process
that
influences
the
progression
of
chronic
obstructive
pulmonary
disease(COPD).
To
better
study
small
airway
in
COPD,
we
employed
advanced
techniques
such
as
decellularized
scaffolds,
immunofluorescence,
scanning
electron
microscopy,
and
proteomics
to
analyze
morphological
compositional
changes
extracellular
matrix
(ECM).
Our
revealed
significant
ultrastructural
abnormalities
scaffolds
from
COPD
group,
including
thinning
alveolar
septa,
enlargement
spaces,
fusion
multiple
alveoli.
Additionally,
ECM
composition
group
exhibited
notable
characterized
by
an
increase
collagen
fibers,
type
I
IV
collagens,
fibronectin,
laminin
(
p
<
.05),
along
with
decrease
elastin
glycosaminoglycans
.05).
Proteomic
analysis
identified
70
differentially
expressed
proteins
between
control
group.
These
included
34
upregulated
Smarca2,
Skt,
Acvrl1,
Myl2
(all
ratios
>10.64),
36
downregulated
Col6a6,
Col6a5,
AnK3
<0.27).
Pathway
indicated
activation
apoptosis
(Enrichment
Score,
ES
=
0.23)
epithelial–mesenchymal
transition
(ES
0.38)
genes
inhibition
synthesis
–0.43)
degradation
–0.63)
were
observed
findings
enhance
our
understanding
mechanisms
underlying
provide
scientific
basis
for
developing
novel
therapeutic
strategies
COPD.
American Journal of Respiratory Cell and Molecular Biology,
Год журнала:
2024,
Номер
70(4), С. 239 - 246
Опубликована: Янв. 8, 2024
The
extracellular
matrix
(ECM)
is
not
just
a
three-dimensional
scaffold
that
provides
stable
support
for
all
cells
in
the
lungs,
but
also
an
important
component
of
chronic
fibrotic
airway,
vascular,
and
interstitial
diseases.
It
bioactive
entity
dynamically
modulated
during
tissue
homeostasis
disease,
controls
structural
immune
cell
functions
drug
responses,
can
release
fragments
have
biological
activity
be
used
to
monitor
disease
activity.
There
growing
recognition
importance
considering
ECM
changes
diseases,
including
Theranostics,
Год журнала:
2025,
Номер
15(6), С. 2092 - 2103
Опубликована: Янв. 13, 2025
Idiopathic
pulmonary
fibrosis
(IPF)
is
a
progressive
disease
characterized
by
an
excessive
collagen
deposition
ultimately
leading
to
tissue
stiffening
and
functional
decline.
Beyond
IPF,
other
are
often
associated
with
connective
diseases
may
develop
in
∼18-32%
of
patients.
Therapeutic
options
limited
nintedanib
pirfenidone
which
only
able
reduce
progression
without
curing
it.
The
current
lack
biomarker
accurately
assess
predict
therapy
efficacy
for
IPF
remains
major
clinical
concern.
Methods:
In
our
study,
was
monitored
bleomycin-induced
lung
mice
vivo
molecular
imaging
using
collagen-targeted
radiopharmaceutical,
[68Ga]Ga-NODAGA-collagelin.
Fibrosis
also
computed
tomography,
the
gold
standard
technique
detect
Results:
We
demonstrated
that
increase
content
can
be
quantified
[68Ga]Ga-NODAGA-collagelin
PET
correlation
stage
severity.
uptake
mainly
found
fibrotic
areas
lungs
bleomycin-receiving
mice.
Most
interestingly,
allowed
non-invasive
monitoring
as
well
anti-fibrotic
effect
JAK
inhibitor,
tofacitinib.
Conclusion:
Thus,
appears
promising
tool
staging,
prediction
towards
personalized
medicine
IPF.
Frontiers in Cell and Developmental Biology,
Год журнала:
2024,
Номер
12
Опубликована: Апрель 5, 2024
Introduction:
Aging
induces
functional
and
structural
changes
in
the
lung,
characterized
by
a
decline
elasticity
diminished
pulmonary
remodeling
regenerative
capacity.
Emerging
evidence
suggests
that
most
biomechanical
alterations
lung
result
from
composition
of
extracellular
matrix
(ECM),
potentially
modulating
behavior
cells
increasing
susceptibility
to
chronic
diseases.
Therefore,
it
is
crucial
investigate
mechanical
properties
aged
lung.
This
study
aims
assess
ECM
due
aging
at
both
residual
(RV)
(FV)
volumes
evaluate
their
effects
on
survival
proliferation
mesenchymal
stromal
(MSCs).
Methods:
The
lungs
young
(4-6-month-old)
(20-24-month-old)
mice
were
inflated
with
optimal
cutting
temperature
compound
reach
FV
or
non-inflated
(RV).
proteins
laminin,
collagen
I
fibronectin
quantified
immunofluorescence
decellularized
sections
assessed
using
atomic
force
microscopy.
To
whether
and/or
RV
affects
MSCs,
viability
evaluated
after
72
h.
Results:
Laminin
presence
was
significantly
reduced
compared
mice,
while
increased
mice.
In
conditions,
acellular
softer
than
By
contrast,
becomes
stiffer
revealing
strain
hardening
depends
aging.
Results
MSCs
recellularization
showed
similar
rate
all
conditions.
Discussion:
data
strongly
measurements,
especially
models,
should
be
carried
out
physiomimetic
conditions
rather
following
conventional
approach.
use
scaffolds
other
disease
murine/human
models
will
help
better
understand
potential
role
mechanotransduction
progression
diseases,
regeneration
cancer.
Proteomes,
Год журнала:
2025,
Номер
13(1), С. 3 - 3
Опубликована: Янв. 13, 2025
Idiopathic
pulmonary
fibrosis
(IPF)
is
a
progressive
lung
disease
characterized
by
repetitive
alveolar
injuries
with
excessive
deposition
of
extracellular
matrix
(ECM)
proteins.
A
crucial
need
in
understanding
IPF
pathogenesis
identifying
cell
types
associated
histopathological
regions,
particularly
local
centers
known
as
fibroblast
foci.
To
address
this,
we
integrated
published
spatial
transcriptomics
and
single-cell
RNA
sequencing
(scRNA-seq)
adopted
the
Query
method
Overlap
to
determine
type
enrichments
regions.
Distinct
are
highly
foci,
transitional
2
aberrant
KRT5-/KRT17+
(KRT:
keratin)
epithelial
cells
morphologically
normal
alveoli
human
lungs.
Furthermore,
employed
laser
capture
microdissection-directed
mass
spectrometry
profile
By
comparing
another
similar
dataset,
common
differentially
expressed
proteins
enriched
pathways
related
ECM
structure
organization
collagen
processing
were
identified
Importantly,
enrichment
results
from
innovative
proteomics
scRNA-seq
data
integration
accord
those
integration,
supporting
capability
versatility
entire
approach.
In
summary,
multi-omics
identify
disease-associated
potential
targets
for
novel
therapies
intervention.
The
approach
can
be
further
applied
other
areas
heterogeneity.
Biomaterials Science,
Год журнала:
2025,
Номер
unknown
Опубликована: Янв. 1, 2025
Fibrosis,
a
hallmark
of
chronic
lung
disease,
involves
ECM
remodeling.
This
work
shows
that
decellularized
from
IPF
lungs—with
its
unique
biochemical
composition—can
promote
profibrotic
fibroblast
phenotype.