The Human Oral Microbiome in Health and Disease: From Sequences to Ecosystems DOI Creative Commons

Jesse R. Willis,

Toni Gabaldón

Microorganisms, Год журнала: 2020, Номер 8(2), С. 308 - 308

Опубликована: Фев. 23, 2020

The human oral cavity is home to an abundant and diverse microbial community (i.e., the microbiome), whose composition roles in health disease have been focus of intense research recent years. Thanks developments sequencing-based approaches, such as 16S ribosomal RNA metabarcoding, whole metagenome shotgun sequencing, or meta-transcriptomics, we now can efficiently explore diversity microbes, even if unculturable. Recent studies charted ecosystems how they change due lifestyle conditions. As progress, there increasing evidence important role microbiome conditions, which are not limited diseases cavity. This, turn, opens new avenues for microbiome-based diagnostics therapeutics that benefit from easy accessibility monitoring manipulation. Yet, many challenges remain ahead. In this review, survey main methodologies currently used highlight major findings enabled by these approaches. Finally, discuss future prospects field.

Язык: Английский

Gut microbiota in human metabolic health and disease DOI
Yong Fan, Oluf Pedersen

Nature Reviews Microbiology, Год журнала: 2020, Номер 19(1), С. 55 - 71

Опубликована: Сен. 4, 2020

Язык: Английский

Процитировано

3206

Current understanding of the human microbiome DOI
Jack A. Gilbert, Martin J. Blaser, J. Gregory Caporaso

и другие.

Nature Medicine, Год журнала: 2018, Номер 24(4), С. 392 - 400

Опубликована: Апрель 1, 2018

Язык: Английский

Процитировано

2112

Supplementation with Akkermansia muciniphila in overweight and obese human volunteers: a proof-of-concept exploratory study DOI
Clara Depommier, Amandine Everard, Céline Druart

и другие.

Nature Medicine, Год журнала: 2019, Номер 25(7), С. 1096 - 1103

Опубликована: Июль 1, 2019

Язык: Английский

Процитировано

1688

The neuroactive potential of the human gut microbiota in quality of life and depression DOI
Mireia Vallès-Colomer, Gwen Falony, Youssef Darzi

и другие.

Nature Microbiology, Год журнала: 2019, Номер 4(4), С. 623 - 632

Опубликована: Фев. 4, 2019

Язык: Английский

Процитировано

1541

Best practices for analysing microbiomes DOI
Rob Knight, Alison Vrbanac, Bryn C. Taylor

и другие.

Nature Reviews Microbiology, Год журнала: 2018, Номер 16(7), С. 410 - 422

Опубликована: Май 23, 2018

Язык: Английский

Процитировано

1419

You are what you eat: diet, health and the gut microbiota DOI
Niv Zmora, Jotham Suez, Eran Elinav

и другие.

Nature Reviews Gastroenterology & Hepatology, Год журнала: 2018, Номер 16(1), С. 35 - 56

Опубликована: Сен. 27, 2018

Язык: Английский

Процитировано

1329

Human gut microbiome: hopes, threats and promises DOI Creative Commons
Patrice D. Cani

Gut, Год журнала: 2018, Номер 67(9), С. 1716 - 1725

Опубликована: Июнь 22, 2018

The microbiome has received increasing attention over the last 15 years. Although gut microbes have been explored for several decades, investigations of role microorganisms that reside in human attracted much beyond classical infectious diseases. For example, numerous studies reported changes microbiota during not only obesity, diabetes, and liver diseases but also cancer even neurodegenerative is viewed as a potential source novel therapeutics. Between 2013 2017, number publications focusing on was, remarkably, 12 900, which represents four-fifths total 40 years investigated this topic. This review discusses recent evidence impact metabolic disorders focus selected key mechanisms. aims to provide critical analysis current knowledge field, identify putative issues or problems discuss misinterpretations. abundance metagenomic data generated comparing diseased healthy subjects can lead erroneous claim bacterium causally linked with protection onset disease. In fact, environmental factors such dietary habits, drug treatments, intestinal motility stool frequency consistency are all influence composition should be considered. cases bacteria Prevotella copri Akkermansia muciniphila will discussed examples.

Язык: Английский

Процитировано

1143

Metagenomic and metabolomic analyses reveal distinct stage-specific phenotypes of the gut microbiota in colorectal cancer DOI
Shinichi Yachida, Sayaka Mizutani,

Hirotsugu Shiroma

и другие.

Nature Medicine, Год журнала: 2019, Номер 25(6), С. 968 - 976

Опубликована: Июнь 1, 2019

Язык: Английский

Процитировано

1044

Guidelines for the use of flow cytometry and cell sorting in immunological studies (second edition) DOI Open Access
Andrea Cossarizza, Hyun‐Dong Chang, Andreas Radbruch

и другие.

European Journal of Immunology, Год журнала: 2019, Номер 49(10), С. 1457 - 1973

Опубликована: Окт. 1, 2019

These guidelines are a consensus work of considerable number members the immunology and flow cytometry community. They provide theory key practical aspects enabling immunologists to avoid common errors that often undermine immunological data. Notably, there comprehensive sections all major immune cell types with helpful Tables detailing phenotypes in murine human cells. The latest techniques applications also described, featuring examples data can be generated and, importantly, how analysed. Furthermore, tips, tricks pitfalls avoid, written peer-reviewed by leading experts field, making this an essential research companion.

Язык: Английский

Процитировано

874

Core microbiomes for sustainable agroecosystems DOI
Hirokazu Toju, Kabir Peay, Masato Yamamichi

и другие.

Nature Plants, Год журнала: 2018, Номер 4(5), С. 247 - 257

Опубликована: Апрель 24, 2018

Язык: Английский

Процитировано

794