A Smart Deoxyribozyme‐Programmable Catalytic DNA Circuit for High‐Contrast MicroRNA Imaging DOI

Yuqiu He,

Qing Wang, Hong Chen

et al.

Angewandte Chemie, Journal Year: 2023, Volume and Issue: 135(33)

Published: June 28, 2023

Abstract Synthetic catalytic DNA circuits have been recognized as a promising signal amplification toolbox for sensitive intracellular imaging, yet their selectivity and efficiency are always constrained by uncontrolled off‐site leakage inefficient on‐site circuitry activation. Thus, the endogenously controllable exposure/activation of is highly desirable achieving selective imaging live cells. Herein, an activated DNAzyme strategy was facilely integrated with circuit guiding efficient microRNA in vivo. To prevent activation, constitute initially caged without sensing functions, which could be selectively liberated amplifier to guarantee high‐contrast target This intelligent modulation can tremendously expand these molecularly engineered biological systems.

Language: Английский

A Smart Deoxyribozyme‐Programmable Catalytic DNA Circuit for High‐Contrast MicroRNA Imaging DOI

Yuqiu He,

Qing Wang, Hong Chen

et al.

Angewandte Chemie International Edition, Journal Year: 2023, Volume and Issue: 62(33)

Published: June 28, 2023

Synthetic catalytic DNA circuits have been recognized as a promising signal amplification toolbox for sensitive intracellular imaging, yet their selectivity and efficiency are always constrained by uncontrolled off-site leakage inefficient on-site circuitry activation. Thus, the endogenously controllable exposure/activation of is highly desirable achieving selective imaging live cells. Herein, an activated DNAzyme strategy was facilely integrated with circuit guiding efficient microRNA in vivo. To prevent activation, constitute initially caged without sensing functions, which could be selectively liberated amplifier to guarantee high-contrast target This intelligent modulation can tremendously expand these molecularly engineered biological systems.

Language: Английский

Citations

45

An electrochemical biosensor designed with entropy-driven autocatalytic DNA circuits for sensitive detection of ovarian cancer-derived exosomes DOI
Ying Deng,

Tianci Zhou,

Kai Hu

et al.

Biosensors and Bioelectronics, Journal Year: 2024, Volume and Issue: 250, P. 116060 - 116060

Published: Jan. 23, 2024

Language: Английский

Citations

19

Electrochemical Self-Sacrificial Label Conversion Coupled with DNA Framework Nanomachine Mediated Serotonin Sensing with Highly Minimized Background Noise DOI
Baoting Dou, Yan Chen, Qiumei Feng

et al.

Analytical Chemistry, Journal Year: 2025, Volume and Issue: unknown

Published: Jan. 2, 2025

Conventional solid/liquid electrochemical interfaces typically encounter challenges with impeded mass transport for poor quantification due to the intricate pathways of reactants from bulk solution. To address this issue, work reports an innovative approach integrating a target-activated DNA framework nanomachine electrochemically driven metal-organic (MOF) conversion self-sacrificial biosensing. The presence target biomarker serotonin initiates by entropy-driven circuit form cross-linked nanostructure and subsequently release Fe-MOF probe. Acting as natural metal precursor nanoconfined source reactant, probe is converted into electroactive Prussian Blue during processes. Taking advantage confinement effect, our proposed biosensor exhibits excellent capability detect in linear range 1 pM 5 μM remarkable detection limit 0.4 exceptional specificity against other interferents. proof-of-concept demonstration clinical serum samples patients carcinoid tumors highlights utility complex sample analysis. design could be applied high potential inspire sensing approaches, holding promise applications biomedical research disease diagnosis.

Language: Английский

Citations

4

A Smart Nano‐Theranostic Platform Based on Dual‐microRNAs Guided Self‐Feedback Tetrahedral Entropy‐Driven DNA Circuit DOI Creative Commons
Sha Yang, Jie Luo,

Ligai Zhang

et al.

Advanced Science, Journal Year: 2023, Volume and Issue: 10(19)

Published: April 21, 2023

MicroRNAs (miRNAs) can act as oncogenes or tumor suppressors, capable of up down-regulating gene expression during tumorigenesis; they are diagnostic biomarkers therapeutic targets for tumors. To detect low abundance intracellular oncogenic miRNAs (onco-miRNAs) and realize synergistic therapy onco-miRNAs a smart nano-theranostic platform based on dual-miRNAs guided self-feedback tetrahedral entropy-driven DNA circuit is created. The delivery vehicle framework, in which the achieves self-feedback, between an situ amplification activation suppressor release. test this platform, selected, miRNA-155, up-regulated miRNA, cancer indicators, miRNA-122, down-regulated miRNA hepatocellular carcinoma, respectively. Through circuit, to at femtomolar level well visualized inside cells, fixed tissues, mice programmed. Furthermore, triggered by preloaded miRNA-122 amplified via released into target cells; sudden increase simultaneous decrease miRNA-155 synergistically served drugs regulation with enhanced antitumor efficacy superior biosafety. It envisioned that will initiate essential step toward theranostics personalized/precise medicine.

Language: Английский

Citations

35

Scaling up of a Self‐Confined Catalytic Hybridization Circuit for Robust microRNA Imaging DOI Creative Commons
Xue Gong, Ruomeng Li, Jiajia Zhang

et al.

Advanced Science, Journal Year: 2024, Volume and Issue: 11(22)

Published: April 13, 2024

Abstract The precise regulation of cellular behaviors within a confined, crowded intracellular environment is highly amenable in diagnostics and therapeutics. While synthetic circuitry system through concatenated chemical reaction network has rarely been reported to mimic dynamic self‐assembly system. Herein, catalytic self‐defined circuit (CSC) for the hierarchically assembly DNA domino nanostructures engineered. By incorporating pre‐sealed symmetrical fragments into preying hairpin reactants, CSC allows hierarchical via microRNA (miRNA)‐powered self‐sorting hybridization reaction. With minimal strand complexity, this self‐sustainable streamlined component achieved localization‐intensified cascaded signal amplification. Profiting from self‐adaptively reaction, reliable robust method discriminating carcinoma tissues corresponding para‐carcinoma tissues. CSC‐sustained strategy provides comprehensive smart toolbox organizing various nanostructures, which may facilitate more insights clinical diagnosis therapeutic assessment.

Language: Английский

Citations

13

Multiply Guaranteed Catalytic DNA Circuit for Cancer-Cell-Selective Imaging of miRNA and Robust Evaluation of Drug Resistance DOI
Zeyue Wang,

Yu Shang,

Yuxuan Zhu

et al.

Analytical Chemistry, Journal Year: 2024, Volume and Issue: 96(14), P. 5560 - 5569

Published: March 26, 2024

Catalytic DNA circuits are desirable for sensitive bioimaging in living cells; yet, it remains a challenge to monitor these intricate signal communications because of the uncontrolled circuitry leakage and insufficient cell selectivity. Herein, simple yet powerful DNA-repairing enzyme (APE1) activation strategy is introduced achieve site-specific exposure catalytic circuit realizing selectively amplified imaging intracellular microRNA robust evaluation APE1-involved drug resistance. Specifically, reactants firmly blocked by recognition/cleavage site prevent undesirable off-site leakage. The caged has no target-sensing activity until its components activated via enzyme-mediated structural reconstitution finally transduces fluorescence within miRNA stimulation. designed demonstrates an enhanced signal-to-background ratio assay as compared with conventional enables cancer-cell-selective miRNA. In addition, shows sensing performance visualizing APE1-mediated chemoresistance cells, which anticipated in-depth clinical diagnosis chemotherapy research.

Language: Английский

Citations

11

Programmable Tetrahedral DNA‐RNA Nanocages Woven with Stimuli‐Responsive siRNA for Enhancing Therapeutic Efficacy of Multidrug‐Resistant Tumors DOI Creative Commons
Changmai Chen,

M.-B. Yu,

Qing X. Li

et al.

Advanced Science, Journal Year: 2024, Volume and Issue: 11(32)

Published: June 25, 2024

Abstract Multidrug resistance (MDR) is a major obstacle limiting the effectiveness of chemotherapy against cancer. The combination strategy chemotherapeutic agents and siRNA targeting drug efflux has emerged as an effective cancer treatment to overcome MDR. Herein, stimuli‐responsive programmable tetrahedral DNA‐RNA nanocages (TDRN) have been rationally designed developed for dynamic co‐delivery doxorubicin P‐glycoprotein (P‐gp) siRNA. Specifically, sense antisense strand sequences P‐gp siRNA, which are bricks with terminal disulfide bond conjugation, precisely embedded in one edge DNA tetrahedron. TDRN provides release element control functional cargo that significantly more stable than “tail‐like” TDN nanostructures. highly rigid 3D nanostructure siRNA‐organized demonstrated notable improvement stability RNase A mouse serum, well long‐term storage up 4 weeks, evidenced by this study. These biocompatible multifunctional nanocarriers gold nanocluster‐assisted delivery (TDRN@Dox@AuNC p ) successfully used achieve synergistic RNAi/Chemo‐therapy vitro vivo. This system, integrates RNAi therapy chemotherapy, offers promising approach treating multidrug‐resistant tumors.

Language: Английский

Citations

11

All-In-One Entropy-Driven DNA Nanomachine for Tumor Cell-Selective Fluorescence/SERS Dual-Mode Imaging of MicroRNA DOI
Shuzhen Yue, Xuan Xu, Liping Jiang

et al.

Analytical Chemistry, Journal Year: 2025, Volume and Issue: unknown

Published: Jan. 13, 2025

An entropy-driven catalysis (EDC) strategy is appealing for amplified bioimaging of microRNAs in living cells; yet, complex operation procedures, lacking cell selectivity, and insufficient accuracy hamper its further applications. Here, we introduce an ingenious all-in-one DNA nanomachine (termed as AIO-EDN), which can be triggered by endogenous apurinic/apyrimidinic endonuclease 1 (APE1) to achieve tumor cell-selective dual-mode imaging microRNA. Compared with the traditional EDC strategy, integrated design AIO-EDN achieves autocatalytic signal amplification without extra fuel strands. Moreover, leverages APE1 overexpressed cancer cells activate reaction, which, however, exerts no target sensing activity normal cells. Combining fluorescence- surface-enhanced Raman scattering (FL/SERS) techniques, this exhibits significantly improved selectivity microRNA This study provides a new paradigm develop EDC-based platform shows great potential in-depth diagnosis high precision.

Language: Английский

Citations

2

Harnessing a Self‐Regenerated Hybridization Circuit for Differentiating Heart Failure Patients of Varied Severity DOI Open Access
Qinglian Liu,

Jianglin Wu,

Jiajia Zhang

et al.

Small, Journal Year: 2025, Volume and Issue: unknown

Published: Feb. 5, 2025

Heart failure (HF) is a globally threatening cardiovascular disease associated with poor quality of life and high mortality, therefore, timely diagnosis risk prediction for HF are urgently needed. Herein, compact yet robust self-regenerated hybridization circuit (SHC) aptasensor developed the amplified detection N-terminal pro-brain natriuretic peptide (NT-proBNP), "gold standard biomarker" HF. The aptamer transduction module can specifically recognize NT-proBNP, thus initiating cascade reaction successively triggers that reversely initiate cross-hybridization reaction. Benefiting from aptamer-specific recognition self-replicated signal amplification, SHC demonstrated more impressive diagnostic performance in elderly patients than clinical fluorescence immunochromatography assay (FICA) terms positive predictive value (21 vs 17), specificity (39 32), accuracy (37 36). Furthermore, this approach allows differentiation among varying severities, achieving sufficiently 78.3%, facilitating accurate therapeutic intervention. versatile reliable system offers new to analyzing low-abundance biomarkers rare specimens, which highly important early prognosis assessment.

Language: Английский

Citations

1

Rolling Circle Amplification-Based Self-Assembly to Form a “GPS-Nanoconveyor” for In Vitro Targeted Imaging and Enhanced Gene/Chemo (CRISPR/DOX) Synergistic Therapy DOI
Huan Du, Fang Wang, Ruyan Zhang

et al.

Biomacromolecules, Journal Year: 2024, Volume and Issue: 25(8), P. 4991 - 5007

Published: Aug. 1, 2024

The GPS-Nanoconveyor (MA-NV@DOX-Cas13a) is a targeted nanoplatform designed for the imaging and gene/chemotherapy synergistic treatment of melanoma. It utilizes rolling circle amplification (RCA) products as scaffold to construct DNA "Nanoconveyor" (NV), which incorporates multivalent aptamer (MA) "GPS", encapsulates doxorubicin (DOX) in transporter, equips it with CRISPR/Cas13a ribonucleoproteins (Cas13a RNP). Carrying MA enhances ability recognize overexpressed receptor nucleolin on B16 cells, enabling precise delivery MA-NV@DOX-Cas13a through receptor-mediated endocytosis. activation signal transducer activator transcription 3 (STAT3) cancer cells triggers cis-cleavage CRISPR/Cas13a, initiating its trans-cleavage function. Additionally, deoxyribonuclease I (DNase I) degrades MA-NV, releasing DOX intracellular chemotherapeutic agent. Experiments demonstrate superior capabilities this versatile cellular co-treatment while highlighting advantages these nanodrug systems mitigating side effects.

Language: Английский

Citations

5