RETICULATE PHYLOGENY: A NEW TETRAPLOID PARTHENOGENETIC WHIPTAIL LIZARD DERIVED FROM HYBRIDIZATION AMONG FOUR BISEXUAL ANCESTRAL SPECIES OF ASPIDOSCELIS (REPTILIA: SQUAMATA: TEIIDAE) DOI Open Access

Charles J. Cole,

Diana P. Baumann,

Harry L. Taylor

et al.

Bulletin of the Museum of Comparative Zoology, Journal Year: 2023, Volume and Issue: 163(7)

Published: Jan. 25, 2023

We describe the only known tetraploid parthenogenetic species of amniote that has haploid genomes from four distinct ancestral bisexual (gonochoristic) species. These were brought together through three hybridization events occurred over a time span hundreds or thousands years, last which recently in captivity without any experimental manipulation. Inheritance alleles at seven microsatellite deoxyribonucleic acid loci and DNA sequence data for adenosine deaminase intron 9 new confirms its parentage and, with quantification, demonstrates tetraploidy high heterozygosity are maintained parthenogenetically generation after generation. Comparisons univariate multivariate variation scalation between tetraploids their parental taxa reveal strong maternal similarity morphological characters, little to no significant differences, suggesting such females may exist old museum samples misidentified as ancestor. This research on specimens adds support earlier papers provide important insights taxonomic treatment many clones teiid lizards occur Western Hemisphere.

Language: Английский

Epigenetic inheritance and reproductive mode in plants and animals DOI
Dafni Anastasiadi, Clare J. Venney, Louis Bernatchez

et al.

Trends in Ecology & Evolution, Journal Year: 2021, Volume and Issue: 36(12), P. 1124 - 1140

Published: Sept. 3, 2021

Language: Английский

Citations

112

Role of environmentally induced epigenetic transgenerational inheritance in evolutionary biology: Unified Evolution Theory DOI Creative Commons
Michael K. Skinner, Eric Nilsson

Current Zoology, Journal Year: 2021, Volume and Issue: 7(1)

Published: Oct. 1, 2021

Abstract The current evolutionary biology theory primarily involves genetic alterations and random DNA sequence mutations to generate the phenotypic variation required for Darwinian natural selection act. This neo-Darwinian evolution is termed Modern Evolution Synthesis has been primary paradigm nearly 100 years. Although environmental factors have a role in selection, does not consider environment impact basic molecular processes involved evolution. An Extended Evolutionary recently developed that extends modern synthesis non-genetic processes. Over past few decades, epigenetics research demonstrated regulate directly independent of alterations. Therefore, can on level through (i.e. epigenetic) mechanisms influence variation, inheritance adaptation. direct action alter phenotype heritable neo-Lamarckian concept facilitate Synthesis) integration genetics, epigenetics, theory, Lamarckian concepts, environment, epigenetic provides shift theory. environmental-induced transgenerational presented describe more unified biology.

Language: Английский

Citations

60

An ecologist's guide for studying DNA methylation variation in wild vertebrates DOI Creative Commons
Veronika N. Laine, Bernice Sepers, Melanie Lindner

et al.

Molecular Ecology Resources, Journal Year: 2022, Volume and Issue: 23(7), P. 1488 - 1508

Published: April 25, 2022

Abstract The field of molecular biology is advancing fast with new powerful technologies, sequencing methods and analysis software being developed constantly. Commonly used tools originally for research on humans model species are now regularly in ecological evolutionary research. There also a growing interest the causes consequences epigenetic variation natural populations. Studying epigenetics currently challenging, especially vertebrate systems, because required technical expertise, complications analyses interpretation, limitations acquiring sufficiently high sample sizes. Importantly, neglecting experimental setup, technology may affect reliability reproducibility, extent to which unbiased conclusions can be drawn from these studies. Here, we provide practical guide researchers aiming study DNA methylation wild vertebrates. We review aspects research, concentrating using bisulfite sequencing, discuss possible pitfalls, how overcome them through rigid reproducible data analysis. This provides solid foundation proper design studies, clear roadmap best practices correct realistic view studying will help implications

Language: Английский

Citations

41

The epigenetics of animal personality DOI Creative Commons
Kees van Oers, Krista van den Heuvel, Bernice Sepers

et al.

Neuroscience & Biobehavioral Reviews, Journal Year: 2023, Volume and Issue: 150, P. 105194 - 105194

Published: April 23, 2023

Animal personality, consistent individual differences in behaviour, is an important concept for understanding how individuals vary they cope with environmental challenges. In order to understand the evolutionary significance of animal it crucial underlying regulatory mechanisms. Epigenetic marks such as DNA methylation are hypothesised play a major role explaining variation phenotypic changes response alterations. Several characteristics also align well personality. this review paper, we summarise current literature on that molecular epigenetic mechanisms may have personality variation. We elaborate potential explain behavioural variation, development and temporal consistency behaviour. then suggest future routes emerging field point pitfalls be encountered. conclude more inclusive approach needed studying epigenetics cannot studied without considering genetic background.

Language: Английский

Citations

32

Population Epigenetics: The Extent of DNA Methylation Variation in Wild Animal Populations DOI Creative Commons
Valentine Chapelle,

Frédéric Silvestre

Epigenomes, Journal Year: 2022, Volume and Issue: 6(4), P. 31 - 31

Published: Sept. 28, 2022

Population epigenetics explores the extent of epigenetic variation and its dynamics in natural populations encountering changing environmental conditions. In contrast to population genetics, basic concepts this field are still their early stages, especially animal populations. Epigenetic may play a crucial role phenotypic plasticity local adaptation as it can be affected by environment, is likely have higher spontaneous mutation rate than nucleotide sequences do, inherited via non-mendelian processes. review, we aim bring together studies generate new insights into ecological evolutionary implications. We first provide an overview DNA methylation autonomy from genetic wild population. Second, discuss which create observed structures including genetics Then, highlight relevance mechanism extended synthesis. Finally, suggest research directions highlighting gaps knowledge field. As for our results, diversity was found reveal parameters that used characterize Some applied explain structure The set recent advancements epigenetics, transgenerational inheritance population, might reshape way ecologists predictive models capacity organisms adapt environments.

Language: Английский

Citations

29

The evolutionary neuroscience of domestication DOI Creative Commons
Erin E. Hecht, Sophie A. Barton, Christina N. Rogers Flattery

et al.

Trends in Cognitive Sciences, Journal Year: 2023, Volume and Issue: 27(6), P. 553 - 567

Published: April 20, 2023

Language: Английский

Citations

17

Gene body methylation evolves during the sustained loss of parental care in the burying beetle DOI Creative Commons
Peter Sarkies,

Jennifer Westoby,

Rebecca M. Kilner

et al.

Nature Communications, Journal Year: 2024, Volume and Issue: 15(1)

Published: Aug. 4, 2024

Abstract Epigenetic modifications, such as 5-methylcytosine (5mC), can sometimes be transmitted between generations, provoking speculation that epigenetic changes could play a role in adaptation and evolution. Here, we use experimental evolution to investigate how 5mC levels evolve populations of biparental insect ( Nicrophorus vespilloides ) derived from wild source population maintained independently under different regimes parental care the lab. We show transcribed regions genes (gene bodies) diverge have been exposed for 30 generations. These do not reflect gene expression. However, accumulation within is associated with reduced variability expression populations. Our results suggest evolved change contribute phenotypic by influencing invertebrates.

Language: Английский

Citations

7

To live or let die? Epigenetic adaptations to climate change—a review DOI Creative Commons

Jonas Zetzsche,

Manon Fallet

Current Zoology, Journal Year: 2024, Volume and Issue: 10(1)

Published: Jan. 1, 2024

Anthropogenic activities are responsible for a wide array of environmental disturbances that threaten biodiversity. Climate change, encompassing temperature increases, ocean acidification, increased salinity, droughts, and floods caused by frequent extreme weather events, represents one the most significant alterations. These drastic challenges pose ecological constraints, with over million species expected to disappear in coming years. Therefore, organisms must adapt or face potential extinctions. Adaptations can occur not only through genetic changes but also non-genetic mechanisms, which often confer faster acclimatization wider variability ranges than their counterparts. Among these mechanisms epigenetics defined as study molecules perpetuate alternative gene activity states context same DNA sequence. Epigenetics has received attention past decades, epigenetic sensitive cues, epimutations spread populations mutations. Epimutations be neutral, deleterious, adaptative transmitted subsequent generations, making them crucial factors both long- short-term responses fluctuations, such climate change. In this review, we compile existing evidence involvement adaptation change discuss derived perspectives remaining field epigenetics.

Language: Английский

Citations

5

Extraction of soybean plant trait parameters based on SfM-MVS algorithm combined with GRNN DOI Creative Commons
Wei He, Zhihao Ye, Mingshuang Li

et al.

Frontiers in Plant Science, Journal Year: 2023, Volume and Issue: 14

Published: July 25, 2023

Soybean is an important grain and oil crop worldwide rich in nutritional value. Phenotypic morphology plays role the selection breeding of excellent soybean varieties to achieve high yield. Nowadays, mainstream manual phenotypic measurement has some problems such as strong subjectivity, labor intensity slow speed. To address problems, a three-dimensional (3D) reconstruction method for plants based on structure from motion (SFM) was proposed. First, 3D point cloud plant reconstructed multi-view images obtained by smartphone SFM algorithm. Second, low-pass filtering, Gaussian Ordinary Least Square (OLS) plane fitting, Laplacian smoothing were used fusion automatically segment data, individual plants, stems, leaves. Finally, Eleven morphological traits, height, minimum bounding box volume per plant, leaf projection area, length width, tilt information, accurately nondestructively measured proposed algorithm phenotype (LPM). Moreover, Support Vector Machine (SVM), Back Propagation Neural Network (BP), (GRNN) prediction models established predict identify varieties. The results indicated that, compared with measurement, root mean square error (RMSE) length, width 0.9997, 0.2357, 0.2666 cm, absolute percentage (MAPE) 2.7013%, 1.4706%, 1.8669%, coefficients determination (R2) 0.9775, 0.9785, 0.9487, respectively. accuracy predicting species according six parameters highest when using GRNN, reaching 0.9211, RMSE 18.3263. Based traits differences between C3, 47-6 W82 soybeans analyzed genetically, because C3 insect-resistant line, trait parametes (minimum number leaves, size single box, area).The show that can effectively extract information leaves without loss which potential ability other dense

Language: Английский

Citations

12

Rewilding shows differential fitness of sympatric Physella acuta (Draparnaud, 1805) snail lineages DOI
Kevin Arthur McQuirk, Juliana M. DeCore, Maria G. Castillo

et al.

Aquatic Ecology, Journal Year: 2025, Volume and Issue: unknown

Published: Jan. 16, 2025

Language: Английский

Citations

0