Elucidating Electronic Structure Variations in Nucleic Acid-Protein Complexes Involved in Transcription Regulation Using a Tight-Binding Approach DOI Creative Commons
Likai Du,

Chengbu Liu

bioRxiv (Cold Spring Harbor Laboratory), Journal Year: 2024, Volume and Issue: unknown

Published: April 19, 2024

Abstract Transcription factor (TF) are proteins that regulates the transcription of genetic information from DNA to messenger RNA by binding a specific sequence. Nucleic acid-protein interactions crucial in regulating biological systems. This work presents quick and convenient method for constructing tight-binding models offers physical insights into electronic structure properties complexes motifs. The tight Hamiltonian parameters generated using random forest regression algorithm, which reproduces given ab-initio level calculations with reasonable accuracy. We present library residue-level derived extensive over various possible combinations nucleobases amino acid side chains high-quality DNA-protein complex structures. As an example, our approach can reasonably generate subtle details orthologous factors human AP-1 Epstein-Barr virus Zta within few seconds on laptop. potentially enhances understanding variations gene-protein interaction complexes, even those involving dozens genes. hope this study powerful tool analyzing regulation mechanisms at structural level. Topic Content bind modulate gene expression, stability reactivity their elucidated eigenvalues model. Visualization these reveals Highest Occupied Molecular Orbital (HOMO) Lowest Unoccupied (LUMO), gap between determines molecular complex. advances revealing dynamics charge transfer states factor-DNA complexes.

Language: Английский

A novel physics-informed neural network for modeling electromagnetism of a permanent magnet synchronous motor DOI
Seho Son,

Hyunseung Lee,

Dayeon Jeong

et al.

Advanced Engineering Informatics, Journal Year: 2023, Volume and Issue: 57, P. 102035 - 102035

Published: June 11, 2023

Language: Английский

Citations

26

A review on the progress, challenges and prospects in the modeling, simulation, control and diagnosis of thermodynamic systems DOI
Dengji Zhou, Dawen Huang

Advanced Engineering Informatics, Journal Year: 2024, Volume and Issue: 60, P. 102435 - 102435

Published: March 3, 2024

Language: Английский

Citations

13

Assessing illumination fatigue in tunnel workers through eye-tracking technology: A laboratory study DOI
Jing Li, J.-G. Zhu,

Cheng Guan

et al.

Advanced Engineering Informatics, Journal Year: 2024, Volume and Issue: 59, P. 102335 - 102335

Published: Jan. 1, 2024

Language: Английский

Citations

11

A process knowledge-based hybrid method for univariate time series prediction with uncertain inputs in process industry DOI

Linjin Sun,

Yangjian Ji, Qixuan Li

et al.

Advanced Engineering Informatics, Journal Year: 2024, Volume and Issue: 60, P. 102438 - 102438

Published: Feb. 28, 2024

Language: Английский

Citations

4

Low-carbon power demand forecasting models for the performance optimization of new energy robotics systems DOI Creative Commons
Huangnian Zhang, Chuanhao Zhang

International Journal of Low-Carbon Technologies, Journal Year: 2025, Volume and Issue: 20, P. 341 - 352

Published: Jan. 1, 2025

Abstract To improve the performance of new energy-powered robots, a method for optimizing robots has been proposed, based on low-carbon power demand forecasting model. The approach advocated leveraging to optimize system design and control strategies. Then, model robotic demands was established, alongside refinement evaluation mechanism. Results indicated significant correlation between operational parameters linked performance. precision our notably high, enabling provision specific optimization strategies tailored diverse contexts.

Language: Английский

Citations

0

Stochastic Algorithm-Based Optimization using Artificial Intelligence/Machine Learning Models for Sorption Enhanced Steam Methane Reformer Reactor DOI

Sumit K. Bishnu,

Sabla Y. Alnouri,

Dhabia M. Al Mohannadi

et al.

Computers & Chemical Engineering, Journal Year: 2025, Volume and Issue: unknown, P. 109060 - 109060

Published: Feb. 1, 2025

Language: Английский

Citations

0

AI-Driven Random Forest Model and the Six Sigma Approach for Enhancing Offset Printing Process and Product Quality DOI Creative Commons
Diana Bratić, Petar Miljković,

Denis Jurečić

et al.

Applied Sciences, Journal Year: 2025, Volume and Issue: 15(5), P. 2266 - 2266

Published: Feb. 20, 2025

The Six Sigma methodology for quality improvement enabled a high degree of process compliance and enhanced capability. This research develops new model optimizing the offset printing based on approach, with aim reducing variability achieving stable, predictable production outcomes. Special focus was placed defining Critical Product Characteristics (CPCs) to Quality (CTQs) points analysing their impact output quality, defined by sigma level. Based research, limits parameters were ensure consistency product quality. integration Artificial Intelligence (AI) within framework allowed additional automation adaptation changing conditions. use Random Forest efficient analysis critical points, prediction potential deviations, real-time adjustment. AI is utilized improve precision efficiency in management, which further enhances stability optimization line dynamic demands modern production. proposed represents an innovative approach that facilitates maintaining stable results provides sustainable foundation future optimizations industry.

Language: Английский

Citations

0

A nonlinear dynamics method using multi-sensor signal fusion for fault diagnosis of rotating machinery DOI
Fei Chen, Jie Liu, Xiaoxi Hu

et al.

Advanced Engineering Informatics, Journal Year: 2025, Volume and Issue: 65, P. 103190 - 103190

Published: Feb. 22, 2025

Language: Английский

Citations

0

Application of ensemble empirical mode decomposition with support vector regression and wavelet neural network in electric load forecasting DOI
Guo‐Feng Fan,

Wei Hui-zhen,

Hsin‐Pou Huang

et al.

Energy Sources Part B Economics Planning and Policy, Journal Year: 2025, Volume and Issue: 20(1)

Published: Feb. 22, 2025

Language: Английский

Citations

0

Optimising and analysis of the hydraulic performance of a water dispersion needle sprinkler using RF-NSGA II and CFD DOI
Hong Li, Xuwei Pan, Yue Jiang

et al.

Biosystems Engineering, Journal Year: 2025, Volume and Issue: 254, P. 104113 - 104113

Published: April 10, 2025

Language: Английский

Citations

0