Phage-tail-like bacteriocins as a biomedical platform to counter anti-microbial resistant pathogens DOI Open Access
Rahul Bhattacharjee, Aditya Nandi, Adrija Sinha

et al.

Biomedicine & Pharmacotherapy, Journal Year: 2022, Volume and Issue: 155, P. 113720 - 113720

Published: Sept. 23, 2022

Phage Tail Like bacteriocins (PTLBs) has been an area of interest in the last couple years owing to their varied application against multi-drug resistant (MDR), anti-microbial (AMR) pathogens and evolutionary link with dsDNA virus bacteriophages. PTLBs are defective phages derived from Myoviridae Siphoviridae phages, distinguished into R-type (Rigid type) characterized by a non-flexible contractile nanotube resembling phage tails, F-type (Flexible flexible non-contractile rod-like structure similar phages. In this review, we have discussed structural association, mechanism, characterization PTLBs. Moreover, elucidated symbiotic biological function MDR XDR highlighted role The difficulties that must be overcome implement clinically also discussed. It is imperative these issues addressed academics future studies before being implemented clinical settings. This article novel its way as it will not only provide us gateway acts strategy for scholars mitigate control uprising issue AMR but promote development

Language: Английский

Mitigation of T3SS-Mediated virulence in waterborne pathogenic Bacteria by multi-electrode Cylindrical-DBD plasma-generated nitric oxide water DOI
Shweta B. Borkar, Manorma Negi, Tirtha Raj Acharya

et al.

Chemosphere, Journal Year: 2023, Volume and Issue: 350, P. 140997 - 140997

Published: Dec. 19, 2023

Language: Английский

Citations

16

Improving the Editing Efficiency of CRISPR-Cas9 by Reducing the Generation of Escapers Based on the Surviving Mechanism DOI
Qi Li,

Mingjun Sun,

Lu Lv

et al.

ACS Synthetic Biology, Journal Year: 2023, Volume and Issue: 12(3), P. 672 - 680

Published: March 3, 2023

Due to the high specificity in targeting DNA and highly convenient programmability, CRISPR-Cas-based antimicrobials applied for eliminating specific strains such as antibiotic-resistant bacteria microbiome were gradually developed. However, generation of escapers makes elimination efficiency far lower than acceptable rate (10-8) recommended by National Institutes Health. Here, a systematic study was carried out providing insight into escaping mechanisms Escherichia coli, strategies reducing devised accordingly. We first showed an escape 10-5-10-3 E. coli MG1655 under editing pEcCas/pEcgRNA established previously. Detailed analysis obtained at ligA site uncovered that disruption cas9 main cause survivors, notably frequent insertion IS5. Hence, sgRNA next designed target "perpetrator" IS5, subsequently killing improved 4-fold. Additionally, IS-free MDS42 also tested site, ∼10-fold decrease compared with MG1655, but still observed all survivors manifested form frameshifts or point mutations. Thus, we optimized tool itself increasing copy number retain some has correct sequence. Fortunately, rates dropped below 10-8 9 16 genes. Furthermore, λ-Red recombination system added generate pEcCas-2.0, 100% gene deletion achieved genes cadA, maeB, gntT whereas those edited low Last, application pEcCas-2.0 then expanded B strain BL21(DE3) W ATCC9637. This reveals mechanism surviving Cas9-mediated death, efficient is based on mechanism, which will accelerate further CRISPR-Cas.

Language: Английский

Citations

13

Biofilm modifiers: The disparity in paradigm of oral biofilm ecosystem DOI Creative Commons

Antarikshya Das,

Swadheena Patro, Faizan Zarreen Simnani

et al.

Biomedicine & Pharmacotherapy, Journal Year: 2023, Volume and Issue: 164, P. 114966 - 114966

Published: June 1, 2023

A biofilm is a population of sessile microorganisms that has distinct organized structure and characteristics like channels projections. Good oral hygiene reduction in the prevalence periodontal diseases arise from minimal accumulation mouth, however, studies focusing on modifying ecology biofilms have not yet been consistently effective. The self-produced matrix extracellular polymeric substances greater antibiotic resistance make it difficult to target eliminate infections, which lead serious clinical consequences are often lethal. Therefore, better understanding required modify order eradicate infection, only instances disorders but also terms nosocomial infections. review focuses several modifiers prevent as well involvement resistance, implants or in-dwelling device contamination, dental caries, other disorders. It discusses recent advances nanotechnology may novel strategies for preventing treating infections caused by outlook infection control.

Language: Английский

Citations

13

Isolation and Characterization of a Broad-Spectrum bacteriophage Against Multi-drug Resistant Escherichia coli from waterfowl field DOI Creative Commons

Shaqiu Zhang,

Qiang Ye,

Mingshu Wang

et al.

Poultry Science, Journal Year: 2025, Volume and Issue: 104(2), P. 104787 - 104787

Published: Jan. 10, 2025

Escherichia coli (E. coli) is a significant pathogen responsible for intestinal infections and foodborne diseases. The rise of antibiotic resistance poses challenge to global public health. Traditional therapy becoming increasingly ineffective, highlighting the urgent need innovative control strategies. This study explores potential bacteriophages as sustainable alternative traditional antibiotics. From 2021 2022, total 183 non-repetitive duck source fecal samples were collected from Mianyang City, Sichuan Province, 126 strains E. isolated. minimum inhibitory concentration (MIC) test showed that these exhibited high piperacillin (96.8%), tetracycline (88.9%), chloramphenicol (86.5%). It concerning 93.7% isolates are classified multidrug-resistant (MDR), posing threat existing treatment options. 20 isolated soil samples, among which 5 selected further analysis. Bacteriophage YP6 excellent lytic effects on MDR strains, especially strain MY104, well representative serotypes O1 MY51) O18 MY106). identification member Myoviridae family was conducted using transmission electron microscopy, it found have an optimal infection factor 0.1. Bacteriophages exhibit thermal pH stability, maintaining survival at temperatures up 60 °C ranges 4 10. Whole genome sequencing confirmed has double stranded DNA 139,323 base pairs (bp), no or virulence genes found, indicating low possibility horizontal gene transfer. In addition, effectively inhibits formation biofilm, key in chronic infections. vivo experiments Galleria mellonella (G. mellonella) larvae shown protective effect against infection. summary, bacteriophage expected become therapeutic agent due its broad host range, environmental biofilm inhibition properties. Future research should optimize preparations, evaluate safety efficacy animal models, establish clinical application plans field food safety.

Language: Английский

Citations

0

The Gut Virome and Human Health: From Diversity to Personalized Medicine DOI Creative Commons

Rahul Harikumar Lathakumari,

K.V. Leela,

Anusha Gopinathan

et al.

Engineering Microbiology, Journal Year: 2025, Volume and Issue: unknown, P. 100191 - 100191

Published: Feb. 1, 2025

Language: Английский

Citations

0

Factors Affecting Gut Microbiota and Its Relationship with Cardiovascular Diseases: A Narrative Review DOI Creative Commons

Hossein Karballaei Mirzahosseini,

Mostafa Esmaeili,

Ali Mirakhorli

et al.

Deleted Journal, Journal Year: 2025, Volume and Issue: 2(1)

Published: Feb. 16, 2025

Context: The estimated population of microorganisms inhabiting the gastrointestinal tract is thought to exceed 1014, with a total weight approximately 2 kg. This accumulation microbiota indicates that number bacterial cells ten times greater than human cells, and gene content exceeds genome by more hundredfold. These are essential for maintaining health, having evolved over millions years. They influence vital processes in life, such as digestion regulation immune system. gut (GM) can be viewed dynamic environmental factor, its composition shaped host genetics, dietary patterns, hygiene practices, lifestyle choices. variability positions it potential therapeutic target cardiovascular disease (CVD) myocardial infarction (MI). Evidence Acquisition: present study review factors affecting intestinal relationship heart diseases. To ensure identification most relevant studies, common databases, including PubMed, Scopus, Web Science, were searched using terms "Gut dysbiosis", "Cardiovascular disease", "Probiotics", "prebiotics". articles abstracts obtained from search then reviewed. Results: Dysbiosis plays significant role onset progression atherosclerosis CVD. Microbiota-derived short-chain fatty acids (SCFAs) crucial development blood pressure. Alterations have been linked dysfunctions lipid metabolism, reduced levels high-density lipoprotein (HDL) plasma patients GM affect efficiency energy extraction sources, thereby impacting likelihood developing obesity through inflammation metabolism. Conclusions:

Language: Английский

Citations

0

The Application of DNA Viruses to Biotechnology DOI Creative Commons
Adam J. Schieferecke,

Norbert Ralph,

David V. Schaffer

et al.

Viruses, Journal Year: 2025, Volume and Issue: 17(3), P. 414 - 414

Published: March 14, 2025

The delivery of biomolecules to target cells has been a longstanding challenge in biotechnology. DNA viruses naturally evolved the ability deliver genetic material and modulate cellular processes. As such, they inherently possess requisite characteristics that have led their extensive study, engineering, development as biotechnological tools. Here, we overview application biotechnology, with specific implications basic research, health, biomanufacturing, agriculture. For each application, review how an increasing understanding virology technological methods genetically manipulate enabled advances these fields. Additionally, highlight remaining challenges unlocking full potential viral technologies. Finally, discuss importance balancing continued progress ethical biosafety considerations.

Language: Английский

Citations

0

Harnessing the human gut microbiota: an emerging frontier in combatting multidrug-resistant bacteria DOI Creative Commons
Wenwen Ding, Yiwen Cheng, Xia Liu

et al.

Frontiers in Immunology, Journal Year: 2025, Volume and Issue: 16

Published: March 17, 2025

Antimicrobial resistance (AMR) has become a major and escalating global health threat, undermining the effectiveness of current antibiotic antimicrobial therapies. The rise multidrug-resistant bacteria led to increasingly difficult-to-treat infections, resulting in higher morbidity, mortality, healthcare costs. Tackling this crisis requires development novel agents, optimization therapeutic strategies, initiatives infection surveillance control. Recent studies highlight crucial role human gut microbiota defending against AMR pathogens. A balanced protects body through mechanisms such as colonization resistance, positioning it key ally fight AMR. In contrast, dysbiosis disrupts defense, thereby facilitating persistence, colonization, dissemination resistant This review will explore how influence drug-resistant bacterial its involvement various types AMR-related potential for microbiota-targeted therapies, fecal transplantation, prebiotics, probiotics, phage therapy. Elucidating interactions between pathogens provide critical insights developing strategies prevent treat infections. While previous reviews have focused on general impact health, specifically look at latest research evolution spread AMR, highlighting strategies.

Language: Английский

Citations

0

Genetic variation in gut microbe as a key regulator of host social behavior in C. elegans DOI Creative Commons
Ying Li,

R. Kasturi Bai,

Yao Zhu

et al.

Gut Microbes, Journal Year: 2025, Volume and Issue: 17(1)

Published: April 14, 2025

Gut microbiota have been shown to influence the social behaviors of their hosts, while variations in host genetics can affect composition microbiome. Nonetheless, degree which genetic microbial populations impact behavior, as well any potential transgenerational effects, remains inadequately understood. Utilizing C. elegans a model organism, we identified 77 strains E. coli from total 3,983 mutants that significantly enhanced aggregation behavior through various neurobehavioral pathways. This discovery underscores collaborative regulatory mechanism between and behavior. Notably, observed some mutant bacteria might via mitochondrial pathway. Additionally, modulation has heritable trait offspring. Our results provide novel perspective on role variation may significant implications for human studies development genetically engineered probiotics aimed at enhancing well-being across generations.

Language: Английский

Citations

0

Engineering the fish gut microbiome: could it serve as future-proof strategy for sustainable aquaculture? DOI Creative Commons

Abdullah Ma,

Manomi Sarasan,

Bhavya Kachiprath

et al.

Deleted Journal, Journal Year: 2025, Volume and Issue: 2(1)

Published: April 18, 2025

Language: Английский

Citations

0