Replication Protein A, the Main Eukaryotic Single-Stranded DNA Binding Protein, a Focal Point in Cellular DNA Metabolism DOI Open Access
Heinz‐Peter Nasheuer, Anna Marie Meaney,

Timothy Hulshoff

et al.

Published: Dec. 1, 2023

Replication protein A (RPA) is a heterotrimeric complex and the main single-stranded DNA (ssDNA) binding in eukaryotes. RPA has key functions most of DNA-associated metabolic pathways damage signalling. Its high affinity for ssDNA helps to stabilise structures prevents sequence from nuclease attacks. consists multiple DNA-binding domains which are oligonucleotide/oligosaccharide-binding (OB)-folds, responsible binding, interactions with proteins. These RPA-ssDNA RPA-protein crucial replication, repair, signalling, conversation genetic information cells. Proteins such as ATR use locate regions Recruitment nucleases exchange factors sites double strand breaks also an important function ensure effective recombination correct these lesions. Due its ssDNA, RPA’s removal central importance allow pathway proceed processes against downstream established all facetted multi-layered will be discussed detail review. major player variety human diseases, discussed.

Language: Английский

Replication Protein A, the Main Eukaryotic Single-Stranded DNA Binding Protein, a Focal Point in Cellular DNA Metabolism DOI Open Access
Heinz‐Peter Nasheuer, Anna Marie Meaney,

Timothy Hulshoff

et al.

International Journal of Molecular Sciences, Journal Year: 2024, Volume and Issue: 25(1), P. 588 - 588

Published: Jan. 2, 2024

Replication protein A (RPA) is a heterotrimeric complex and the main single-stranded DNA (ssDNA)-binding in eukaryotes. RPA has key functions most of DNA-associated metabolic pathways damage signalling. Its high affinity for ssDNA helps to stabilise structures protect sequence from nuclease attacks. consists multiple DNA-binding domains which are oligonucleotide/oligosaccharide-binding (OB)-folds that responsible binding interactions with proteins. These RPA-ssDNA RPA-protein crucial replication, repair, signalling, conservation genetic information cells. Proteins such as ATR use locate regions The recruitment nucleases exchange factors sites double-strand breaks also an important function ensure effective recombination correct these lesions. Due its ssDNA, RPA's removal central importance allow proceed, processes against downstream established all faceted multi-layered well role variety human diseases will be discussed.

Language: Английский

Citations

9

Accelerated epigenetic aging in Huntington’s disease involves polycomb repressive complex 1 DOI Creative Commons

Baptiste Brulé,

Rafael Alcalá‐Vida, Noémie Penaud

et al.

Nature Communications, Journal Year: 2025, Volume and Issue: 16(1)

Published: Feb. 11, 2025

Abstract Loss of epigenetic information during physiological aging compromises cellular identity, leading to de-repression developmental genes. Here, we assessed the epigenomic landscape vulnerable neurons in two reference mouse models Huntington neurodegenerative disease (HD), using cell-type-specific multi-omics, including temporal analysis at three stages via FANS-CUT&Tag. We show accelerated genes HD striatal neurons, involving histone re-acetylation and depletion H2AK119 ubiquitination H3K27 trimethylation marks, which are catalyzed by polycomb repressive complexes 1 2 (PRC1 PRC2), respectively. further identify a PRC1-dependent subcluster bivalent transcription factors that is re-activated neurons. This mechanism likely involves progressive paralog switching between PRC1-CBX genes, promotes upregulation normally low-expressed PRC1-CBX2/4/8 isoforms alongside down-regulation predominant these cells (e.g., CBX6/7). Collectively, our data provide evidence for

Language: Английский

Citations

1

Mapping SCA1 regional vulnerabilities reveals neural and skeletal muscle contributions to disease DOI Creative Commons

Lisa Duvick,

William M. Southern,

Kellie A. Benzow

et al.

JCI Insight, Journal Year: 2024, Volume and Issue: 9(9)

Published: March 21, 2024

Spinocerebellar ataxia type 1 (SCA1) is a fatal neurodegenerative disease caused by an expanded polyglutamine tract in the widely expressed ataxin-1 (ATXN1) protein. To elucidate anatomical regions and cell types that underlie mutant ATXN1-induced phenotypes, we developed floxed conditional knockin mouse (f-ATXN1146Q/2Q) with Atxn1 coding exons replaced human ATXN1 encoding 146 glutamines. f-ATXN1146Q/2Q mice manifested SCA1-like phenotypes including motor cognitive deficits, wasting, decreased survival. Central nervous system (CNS) contributions to were revealed using f-ATXN1146Q/2Q;Nestin-Cre mice, showed improved rotarod, open field, Barnes maze performance 6-12 weeks-of-age. In contrast, striatal deficits f-ATXN1146Q/2Q;Rgs9-Cre lacking ATXN1146Q/2Q medium-spiny neurons trending improvement rotarod at 30 Surprisingly, prominent role for muscle was f-ATXN1146Q/2Q;ACTA1-Cre based on their recovery from kyphosis absence of pathology. Collectively, data targeted deletion allele demonstrated CNS peripheral highlighted need consider addition brain optimal SCA1 therapeutics.

Language: Английский

Citations

5

Mutant huntingtin induces neuronal apoptosis via derepressing the non-canonical poly(A) polymerase PAPD5 DOI Creative Commons
Zhefan Stephen Chen, Shaohong Peng,

Lok I Leong

et al.

Nature Communications, Journal Year: 2025, Volume and Issue: 16(1)

Published: April 9, 2025

Abstract MicroRNAs (miRNAs) are small non-coding RNAs that play crucial roles in post-transcriptional gene regulation. Poly(A) RNA polymerase D5 (PAPD5) catalyzes the addition of adenosine to 3′ end miRNAs. In this study, we demonstrate Yin Yang 1 protein, a transcriptional repressor PAPD5, is recruited both foci and protein aggregates, resulting an upregulation PAPD5 expression Huntington’s disease (HD). Additionally, identify subset PAPD5-regulated miRNAs with increased adenylation reduced our model. We focus on miR-7-5p find its reduction causes activation TAB2-mediated TAK1–MKK4–JNK pro-apoptotic pathway. This pathway also activated induced pluripotent stem cell-derived striatal neurons post-mortem tissues isolated from HD patients. addition, discover molecule inhibitor, BCH001, can mitigate cell death neurodegeneration models. study highlights importance PAPD5-mediated miRNA dysfunction pathogenesis suggests potential therapeutic direction for disease.

Language: Английский

Citations

0

CAG Repeat Expansions Increase N1-Methyladenine to Alter TDP-43 Phase Separation: Lights Up Therapeutic Intervention for Neurodegeneration DOI Creative Commons
Lin Yuan,

Lihong Mao,

Jiayi Li

et al.

Aging and Disease, Journal Year: 2024, Volume and Issue: unknown

Published: Jan. 1, 2024

N1-methyladenine (m1A), a modification of transcripts, regulates mRNA structure and translation efficiency. In recent issue Nature, Sun et al. reported that m1A in CAG repeat RNA contributes to expansion-induced neurodegeneration Caenorhabditis elegans Drosophila through enhancing the ability endogenous TDP-43 partition into stress granules mediated by m1A. The study is especially important for revealing pathological function mechanisms expansion-related neurodegenerative diseases.

Language: Английский

Citations

3

Huntingtin is an RNA binding protein and participates in NEAT1 -mediated paraspeckles DOI Creative Commons
Manisha Yadav, Rachel Harding, Tiantian Li

et al.

Science Advances, Journal Year: 2024, Volume and Issue: 10(29)

Published: July 19, 2024

Huntingtin protein, mutated in Huntington’s disease, is implicated nucleic acid–mediated processes, yet the evidence for direct huntingtin–nucleic acid interaction limited. Here, we show wild-type and mutant huntingtin copurify with acids, primarily RNA, interact directly G-rich RNAs vitro assays. RNA-immunoprecipitation sequencing from patient-derived fibroblasts neuronal progenitor cells expressing revealed long noncoding RNA NEAT1 as a significantly enriched transcript. Altered levels were evident disease postmortem brain tissues, knockdown decreased levels. colocalized paraspeckles, identified high-affinity motif preferred by huntingtin. This study highlights interactor, demonstrating huntingtin’s involvement RNA-mediated functions paraspeckle regulation.

Language: Английский

Citations

3

The Intriguing Mystery of RPA Phosphorylation in DNA Double-Strand Break Repair DOI Open Access
Valerie J. Fousek-Schuller, Gloria Borgstahl

Genes, Journal Year: 2024, Volume and Issue: 15(2), P. 167 - 167

Published: Jan. 27, 2024

Human Replication Protein A (RPA) was historically discovered as one of the six components needed to reconstitute simian virus 40 DNA replication from purified components. RPA is now known be involved in all metabolism pathways that involve single-stranded (ssDNA). Heterotrimeric comprises several domains connected by flexible linkers and heavily regulated post-translational modifications (PTMs). The structure has been challenging obtain. Various structural methods have applied, but a complete understanding RPA's structure, its function, how it PTMs yet obtained. This review will summarize recent literature concerning phosphorylated cell cycle, analysis RPA, protein interactions involving regulate activity complex formation double-strand break repair. There are many holes our this research area. We conclude with perspectives for future on control repair cycle.

Language: Английский

Citations

2

Tau beyond Tangles: DNA Damage Response and Cytoskeletal Protein Crosstalk on Neurodegeneration DOI Open Access

Megumi Asada‐Utsugi,

Makoto Urushitani

International Journal of Molecular Sciences, Journal Year: 2024, Volume and Issue: 25(14), P. 7906 - 7906

Published: July 19, 2024

Neurons in the brain are continuously exposed to various sources of DNA damage. Although mechanisms damage repair mitotic cells have been extensively characterized, pathways post-mitotic neurons still largely elusive. Moreover, inaccurate can result deleterious mutations, including deletions, insertions, and chromosomal translocations, ultimately compromising genomic stability. Since terminally differentiated cells, they cannot employ homologous recombination (HR) for double-strand break (DSB) repair, suggesting existence neuron-specific mechanisms. Our research has centered on microtubule-associated protein tau (MAPT), a crucial pathological implicated neurodegenerative diseases, its interplay with neurons' response (DDR). This review aims provide an updated synthesis current understanding complex between DDR cytoskeletal proteins neurons, particular focus role disorders.

Language: Английский

Citations

2

HD and SCA1: Tales from two 30-year journeys since gene discovery DOI
Leslie M. Thompson, Harry T. Orr

Neuron, Journal Year: 2023, Volume and Issue: 111(22), P. 3517 - 3530

Published: Oct. 19, 2023

Language: Английский

Citations

4

Repair of genomic interstrand crosslinks DOI
Marina A. Bellani,

Althaf Shaik,

Ishani Majumdar

et al.

DNA repair, Journal Year: 2024, Volume and Issue: 141, P. 103739 - 103739

Published: July 30, 2024

Language: Английский

Citations

1