bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2025,
Volume and Issue:
unknown
Published: March 27, 2025
Abstract
Antiretroviral
therapy
(ART)
has
dramatically
improved
the
clinical
prognosis
for
people
with
HIV
and
prevents
transmission.
However,
ART
does
not
cure
infection
because
of
a
persistent,
latent
reservoir
in
long-lived
cells
such
as
central
memory
CD4
+
T
(T
CM
)
cells.
Eliminating
or
preventing
formation
will
require
better
understanding
HIV-1
latency
establishment.
We
others
have
recently
shown
that
host
cell
factors
histone
deacetylases
(HDACs)
are
critical
cellular
allow
entry
into
latency.
Whether
HDACs
interact
specific
viral
to
regulate
establishment,
however,
is
unknown.
To
examine
role
individual
accessory
proteins,
we
constructed
panel
reporter
strains,
each
expressing
single
protein,
examined
them
primary
T-cell
model.
Interestingly,
found
HDAC
inhibitor
(HDACi)
vorinostat
potently
enhances
effect
protein
Vpr
promoting
expression
infected
cells,
suggesting
possesses
cryptic
transcription-promoting
activity
restricted
by
HDACs.
This
was
dependent
on
p300-binding
domain
inhibited
selective
p300
acetyltransferase
inhibitor.
also
resulted
significant
increase
proportion
phenotype.
Furthermore,
observed
were
more
resistant
Vpr-induced
apoptosis/cell
death
than
other
subtypes,
indicating
during
selects
proviruses
Overall,
these
findings
suggest
plays
an
important
shaping
results,
part,
from
HDAC-mediated
restriction
Vpr’s
activity.
Understanding
how
shape
establishment
aid
development
new
latency-targeting
therapies.
Author
Summary
Although
antiretroviral
effective
at
treating
HIV,
remains
elusive.
The
obstacle
presence
latently
which
virus
persists
despite
therapy.
Recent
work
sizable
fraction
this
forms
near
time
initiated,
it
may
be
possible
prevent
some
forming.
prevention
enters
latency,
including
gene
silenced.
therefore
sought
interaction
between
proteins
turning
off
that,
whereas
turns
expression,
block
Second,
leads
relative
type
harbors
virus.
Our
silencing
persistence
certain
types
developing
approaches
targeting
Nature Communications,
Journal Year:
2021,
Volume and Issue:
12(1)
Published: Sept. 20, 2021
Abstract
N
6
,2′-
O
-dimethyladenosine
(m
Am)
is
an
abundant
RNA
modification
located
adjacent
to
the
5′-end
of
mRNA
7-methylguanosine
7
G)
cap
structure.
m
A
methylation
on
2′-
-methylated
at
5′-ends
mRNAs
catalyzed
by
methyltransferase
Phosphorylated
CTD
Interacting
Factor
1
(PCIF1).
The
role
Am
and
function
PCIF1
in
regulating
host–pathogens
interactions
are
unknown.
Here,
we
investigate
dynamics
reprogramming
host
methylome
during
HIV
infection.
We
show
that
infection
induces
a
dramatic
decrease
cellular
mRNAs.
By
using
depleted
T
cells,
identify
2237
genes
854
affected
Strikingly,
find
restricts
replication.
Further
mechanism
studies
viral
protein
R
(Vpr)
interacts
with
ubiquitination
degradation.
Among
genes,
inhibits
enhancing
transcription
factor
ETS1
(ETS
Proto-Oncogene
1,
factor)
stability
binds
promoter
regulate
transcription.
Altogether,
our
study
discovers
HIV–host
interactions,
identifies
modified
cells
which
infection,
reveals
how
regulates
epitranscriptomics
through
Viruses,
Journal Year:
2024,
Volume and Issue:
16(3), P. 420 - 420
Published: March 9, 2024
HIV-1
encodes
four
accesory
proteins
in
addition
to
its
structural
and
regulatory
genes.
Uniquely
amongst
them,
Vpr
is
abundantly
present
within
virions,
meaning
it
poised
exert
various
biological
effects
on
the
host
cell
upon
delivery.
In
this
way,
contributes
towards
establishment
of
a
successful
infection,
as
evidenced
by
extent
which
depends
factor
achieve
full
pathogenicity
vivo.
Although
HIV
infects
types
organism,
CD4+
T
cells
are
preferentially
targeted
since
they
highly
permissive
productive
concomitantly
bringing
about
hallmark
immune
dysfunction
that
accompanies
spread.
The
last
several
decades
have
seen
unprecedented
progress
unraveling
activities
possesses
at
molecular
scale,
increasingly
underscoring
importance
viral
component.
Nevertheless,
remains
controversial
whether
some
these
advances
bear
vivo
relevance,
commonly
employed
cellular
models
significantly
differ
from
primary
lymphocytes.
One
prominent
example
“established”
ability
induce
G2
cycle
arrest,
with
enigmatic
physiological
relevance
infected
objective
review
discoveries
their
context
illustrate
mechanisms
whereby
supports
infection
cells,
whilst
identifying
findings
require
validation
physiologically
relevant
models.
HIV-1
must
replicate
in
cells
that
are
equipped
to
defend
themselves
from
infection
through
intracellular
innate
immune
systems.
evades
sensing
encapsidated
DNA
synthesis
and
encodes
accessory
genes
antagonize
specific
antiviral
effectors.
Here,
we
show
both
particle
associated,
expressed
Vpr,
the
stimulatory
effect
of
a
variety
pathogen
associated
molecular
patterns
by
inhibiting
IRF3
NF-κB
nuclear
transport.
Phosphorylation
at
S396,
but
not
S386,
was
also
inhibited.
We
propose
that,
rather
than
promoting
import,
Vpr
interacts
with
karyopherins
disturb
their
import
promote
replication
macrophages.
Concordantly,
demonstrate
Vpr-dependent
rescue
human
macrophages
inhibition
cGAMP,
product
activated
cGAS.
model
unifies
manipulation
activation
transmission.
Viruses
manipulate
host
cells
to
enhance
their
replication,
and
the
identification
of
cellular
factors
targeted
by
viruses
has
led
key
insights
into
both
viral
pathogenesis
cell
biology.
In
this
study,
we
develop
an
HIV
reporter
virus
(HIV-AFMACS)
displaying
a
streptavidin-binding
affinity
tag
at
surface
infected
cells,
allowing
facile
one-step
selection
with
streptavidin-conjugated
magnetic
beads.
We
use
system
obtain
pure
populations
HIV-infected
primary
human
CD4+
T
for
detailed
proteomic
analysis,
quantitate
approximately
9000
proteins
across
multiple
donors
on
dynamic
background
activation.
Amongst
650
HIV-dependent
changes
(q
<
0.05),
describe
novel
Vif-dependent
targets
FMR1
DPH7,
192
not
identified
and/or
regulated
in
lines,
such
as
ARID5A
PTPN22.
therefore
provide
high-coverage
functional
atlas
infection,
mechanistic
account
subverted
its
natural
target
cell.
Cells,
Journal Year:
2019,
Volume and Issue:
8(11), P. 1310 - 1310
Published: Oct. 24, 2019
Vpr
is
a
lentiviral
accessory
protein
that
expressed
late
during
the
infection
cycle
and
packaged
in
significant
quantities
into
virus
particles
through
specific
interaction
with
P6
domain
of
viral
Gag
precursor.
Characterization
physiologically
relevant
function(s)
has
been
hampered
by
fact
many
cell
lines,
deletion
does
not
significantly
affect
fitness.
However,
critical
for
replication
primary
macrophages
pathogenesis
vivo.
It
generally
accepted
have
enzymatic
activity
but
functions
as
molecular
adapter
to
modulate
or
cellular
processes
benefit
virus.
Indeed,
interacting
factors
described
now,
goal
this
review
summarize
our
current
knowledge
proteins
targeted
Vpr.
Nature Communications,
Journal Year:
2021,
Volume and Issue:
12(1)
Published: June 17, 2021
The
HIV-1
accessory
proteins
Vif,
Vpu,
and
Nef
can
promote
infection
by
overcoming
the
inhibitory
effects
of
host
cell
restriction
factors
APOBEC3G,
Tetherin,
SERINC5,
respectively.
However,
how
protein
Vpr
enhances
in
macrophages
but
not
CD4+
T
cells
remains
elusive.
Here,
we
report
that
counteracts
lysosomal-associated
transmembrane
5
(LAPTM5),
a
potent
inhibitor
particle
infectivity,
to
enhance
macrophages.
LAPTM5
transports
envelope
glycoproteins
lysosomes
for
degradation,
thereby
inhibiting
virion
infectivity.
restrictive
triggering
its
degradation
via
DCAF1.
In
absence
Vpr,
silencing
precisely
phenocopied
effect
on
infection.
contrast,
did
LAPTM5.
Moreover,
was
highly
expressed
lymphocytes.
Re-expressing
reconstituted
Vpr-dependent
promotion
primary
cells,
as
observed
Herein,
demonstrate
molecular
mechanism
used
overcome
macrophages,
providing
potential
strategy
anti-HIV/AIDS
therapeutics.
Heliyon,
Journal Year:
2023,
Volume and Issue:
9(12), P. e21886 - e21886
Published: Nov. 19, 2023
Genetically
modified
macrophage
infusion
has
been
proven
to
be
a
novel
treatment
for
cancer.
One
of
the
most
important
processes
in
macrophage-based
therapy
is
efficient
transfer
genes.
HIV-1-derived
lentiviruses
were
widely
used
as
delivery
vectors
chimeric
antigen
receptor
T
and
NK
cell
construction.
While
macrophages
are
relatively
refractory
this
lentiviral
vector
transduction
result
myeloid-specific
restriction
factor
SAMHD1,
which
inhibited
virion
cycle
through
exhausting
dNTPs
pool
degradating
RNAs.
An
strategy
developed
via
packaging
HIV-2
accessory
protein
Vpx
into
virion.
counteracts
SAMHD1
CRL4
(DCAF1)
E3
ubiquitin
ligase
mediated
degradation,
yet
influence
by
introduction
on
not
fully
evaluated.
Here,
we
constructed
HIV-1-Vpx
systematically
analyzed
infection
efficiency
time-dependent
manner.
Our
results
showed
that
simplified
virus
exhibited
dramatically
enhanced
human
compared
normal
lentivirus.
Moreover,
transcriptome
sequencing
was
performed
evaluate
cellular
status
after
infection.
The
indicated
promoted
remodeling
towards
proinflammatory
phenotype,
without
affecting
classic
M1/M2
surface
markers.
suggest
Vpx-containing
lentivirus
could
an
ideal
tool
generation
genetically
engineered
with
high
gene
poised
sets,
especially
solid
tumor
treatment.
Cell Reports,
Journal Year:
2022,
Volume and Issue:
39(2), P. 110650 - 110650
Published: April 1, 2022
HIV-1
replicates
in
CD4+
T
cells,
leading
to
AIDS.
Determining
how
shapes
its
niche
create
a
permissive
environment
is
central
informing
efforts
limit
pathogenesis,
disturb
reservoirs,
and
achieve
cure.
A
key
roadblock
understanding
HIV-T
cell
interactions
the
requirement
activate
cells
vitro
make
them
infection.
This
dramatically
alters
biology
virus-host
interactions.
Here
we
show
that
cell-to-cell
spread
permits
efficient,
productive
infection
of
resting
memory
without
prior
activation.
Strikingly,
find
primes
gain
characteristics
tissue-resident
(TRM),
including
upregulating
surface
markers
transcription
factor
Blimp-1
inducing
transcriptional
program
overlapping
core
TRM
signature.
reprogramming
driven
by
Vpr
requires
packaging
into
virions
manipulation
STAT5.
Thus,
reprograms
with
implications
for
viral
replication
persistence.