Research Square (Research Square),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Aug. 10, 2023
Abstract
Aims
The
association
between
the
gut
microbiota
and
non-alcoholic
fatty
liver
disease
(NAFLD)
has
been
documented;
however,
causal
relationship
them
remains
unclear.
aim
of
this
study
was
to
explore
NAFLD
using
Mendelian
randomization.
Methods
We
conducted
a
randomization
study,
data
(n
=
18340)
from
MiBioGen
consortium
as
exposure
dataset
FinnGen
R9
release
377,277)
outcome.
Inverse
variance
weighted
employed
primary
analysis
method,
sensitivity
performed.
Additionally,
network
graph
resembling
phylogenetic
tree
created
further
reveal
evolutionary
relationships
among
microbiota.
Results
Six
bacterial
features
exhibited
with
NAFLD:
Actinomycetales
(OR
1.50,
95%
CI:
1.01–2.21,
p
0.043),
Actinomycetaceae
1.49,
1.01–2.20,
Actinomyces
1.36,
1.09–1.71,
0.006),
Prevotella
7
1.19,
1.01–1.39,
0.039)
potential
detrimental
effects
on
NAFLD,
whereas
Anaerofilum
0.85,
0.72–0.99,
0.042)
Gordonibacter
0.84,
0.72–0.98,
0.024)
protective
effects.
Furthermore,
,
are
located
same
branch.
Conclusions
Our
revealed
six
bacteria
NAFLD.
These
findings
shed
light
role
specific
in
pathogenesis
offer
valuable
insights
into
future
therapeutic
interventions
preventive
strategies.
Cardiovascular Research,
Journal Year:
2024,
Volume and Issue:
120(4), P. 372 - 384
Published: Jan. 26, 2024
Abstract
Aims
Gut
microbiota
have
been
linked
to
blood
lipid
levels
and
cardiovascular
diseases
(CVDs).
The
composition
abundance
of
gut
trophic
networks
differ
between
ethnicities.
We
aim
evaluate
the
relationship
microbiotal
CVD
phenotypes.
Methods
results
included
cross-sectional
data
from
3860
individuals
without
history
6
ethnicities
living
in
Amsterdam
region
participating
prospective
Healthy
Life
Urban
Setting
(HELIUS)
study.
Genetic
variants
were
genotyped,
faecal
profiled,
anthropometric
parameters
measured.
A
machine
learning
approach
was
used
assess
risk
(Framingham
score)
stratified
by
ethnicity.
Potential
causal
relationships
inferred
performing
two-sample
Mendelian
randomization
with
hard
events
Pan-UK
Biobank
microbiome
genome-wide
association
studies
summary
a
subset
HELIUS
cohort
(n
=
4117).
Microbial
taxa
identified
be
associated
often
ethnic-specific,
but
some
concordance
across
found.
microbes
Akkermansia
muciniphila
Ruminococcaceae
UCG-002
protective
against
ischaemic
heart
disease
African-Surinamese
Moroccans,
respectively.
strong
inverse
lipids,
risk,
combined
correlated
Christensenellaceae–Methanobrevibacter–Ruminococcaceae
(CMR).
CMR
cluster
also
two
independent
cohorts
triglycerides
replicated.
Conclusion
Certain
can
potentially
events,
possible
ethnic-specific
effects.
network
centred
around
Christensenellaceae,
Methanobrevibacter,
various
Ruminococcaceae,
frequently
lacking
South-Asian
Surinamese,
low
triglyceride
levels.
Biomedicines,
Journal Year:
2025,
Volume and Issue:
13(1), P. 121 - 121
Published: Jan. 7, 2025
Introduction:
The
shaping
of
the
human
intestinal
microbiota
starts
during
intrauterine
period
and
continues
through
subsequent
stages
extrauterine
life.
plays
a
significant
role
in
predisposition
development
immune
diseases,
as
well
various
inflammatory
processes.
Importantly,
proper
colonization
fetal
digestive
system
is
influenced
by
maternal
microbiota,
method
pregnancy
completion
further
formation
microbiota.
In
child's
life,
breastfeeding,
diet
use
antibiotics
influence
state
eubiosis,
which
determines
growth
from
neonatal
to
adulthood.
literature
data
suggest
that
there
evidence
confirm
infant
an
important
regulating
response
associated
with
allergic
diseases.
However,
identification
specific
bacterial
species
relation
types
reactions
diseases
basic
problem.
Background:
main
aim
review
was
demonstrate
mother,
fetus
newborn
on
functioning
context
allergies
asthma.
Methods:
We
reviewed
thoroughly
analyzed
content
over
1000
articles
abstracts
between
beginning
June
end
August
2024.
Over
150
were
selected
for
detailed
study.
Results:
selection
based
PubMed
National
Library
Medicine
search
engine,
using
keywords:
"the
impact
asthma",
"intestinal
diseases",
"intrauterine
atopic
dermatitis",
food
allergies",
"maternal
microbiota",
"fetal
microbiota"
"neonatal
microbiota".
above
relationships
constituted
criteria
including
analysis.
Conclusions:
present
review,
we
showed
relationship
normal
system.
eubiosis
adequate
amount
diversity
essential
preventing
way
shaped,
resulting
health-promoting
behavior
pregnant
women,
rational
conduct
medical
staff
performance
diagnostic
therapeutic
process,
necessary
maintain
health
mother
child.
Therefore,
appropriate
lifestyle,
antibiotic
therapy
completing
are
indispensable
prevention
conditions.
At
same
time,
considering
genera
phyla
bacteria
have
potentially
protective
effect,
it
worth
noting
suitable
probiotics
prebiotics
seems
contribute
effect.
Pathophysiology,
Journal Year:
2024,
Volume and Issue:
31(1), P. 68 - 88
Published: Feb. 2, 2024
Anorexia
nervosa
(AN)
remains
a
challenging
condition
in
psychiatric
management
and
its
pathogenesis
is
not
yet
fully
understood.
An
imbalance
the
gut
microbiota
composition
may
contribute
to
pathophysiology.
This
review
aims
explore
link
between
human
AN
(objective
1)
or
refeeding
syndrome
2).
The
online
databases
MEDLINE
PsycINFO
were
searched
for
relevant
studies.
A
total
of
14
studies
met
inclusion
exclusion
criteria
only
answered
objective
1.
476
patients,
554
healthy-weight
(HC)
controls,
0
patients
with
other
disorders
included.
Compared
HC,
there
consistently
reduced
abundances
Faecalibacterium
prausnitzii
Roseburia
inulinivorans,
increased
Methanobrevibacter
smithii,
patients.
Changes
alpha
diversity
inconsistent,
while
beta
four
six
Our
model
suggests
that
an
leads
short-chain
fatty
acids,
contributing
proinflammatory
state
AN,
which
also
common
comorbidities.
Microbial
changes
semistarvation
through
endocrine
altered
energy
utilization.
Cells,
Journal Year:
2022,
Volume and Issue:
11(19), P. 3091 - 3091
Published: Sept. 30, 2022
Health
is
influenced
by
how
the
gut
microbiome
develops
as
a
result
of
external
and
internal
factors,
such
nutrition,
environment,
medication
use,
age,
sex,
genetics.
Alpha
beta
diversity
metrics
(enterotype)
clustering
methods
are
commonly
employed
to
perform
population
studies
analyse
effects
various
treatments,
yet,
with
continuous
development
(new)
sequencing
technologies,
omics
fields
become
more
accessible
for
investigation,
increasingly
sophisticated
methodologies
needed
indeed
being
developed
in
order
disentangle
complex
ways
which
health
intertwined.
Diseases
affluence,
type
2
diabetes
(T2D)
cardiovascular
diseases
(CVD),
linked
species
associated
Bacteroides
enterotype(s)
decline
(beneficial)
microbial
trophic
networks,
turn
aforementioned
factors.
In
this
review,
we
(1)
explore
that
some
most
common
factors
have
on
composition
these
relate
T2D
CVD,
(2)
discuss
research
opportunities
enabled
limitations
latest
technical
developments
sector,
including
use
artificial
intelligence
(AI),
strain
tracking,
peak
trough
ratios.
Frontiers in Immunology,
Journal Year:
2023,
Volume and Issue:
14
Published: March 9, 2023
Background
Multiple
clinical
studies
have
indicated
that
the
gut
microbiota
influences
effects
of
immune
checkpoint
blockade
(ICB)
therapy
comprising
PD-1/PD-L1
inhibitors,
but
causal
relationship
is
unclear.
Because
numerous
confounders,
many
microbes
related
to
not
been
identified.
This
study
aimed
determine
between
and
identify
possible
biomarkers
for
ICB
therapy.
Method
We
used
bidirectional
two-sample
Mendelian
randomization
with
two
different
thresholds
explore
potential
species-level
GWAS
verify
result.
Result
In
primary
forward
analysis,
genus_Holdemanella
showed
a
negative
correlation
PD-1
[βIVW
=
-0.25;
95%
CI
(-0.43
-0.07);
P
FDR
0.028]
genus_Prevotella9
positive
0.2;
(0.1
0.4);
0.027];
order_Rhodospirillales
0.044],
family_Rhodospirillaceae
(0
0.032],
genus_Ruminococcaceae_UCG005
0.29;
(0.08
0.5);
0.028],
genus_Ruminococcus_gnavus_group
0.22;
(0.05
0.029],
genus_Coprococcus_2
0.4;
0.6);
0.018]
were
positively
correlated
PD-L1;
phylum_Firmicutes
-0.3;
(-0.4
-0.1);
0.031],
family_ClostridialesvadinBB60group
-0.31;
(-0.5
-0.11),
0.008],
family_Ruminococcaceae
-0.33;
(-0.58
0.049],
genus_Ruminococcaceae_UCG014
-0.35;
(-0.57
-0.13);
0.006]
negatively
PD-L1.
The
one
significant
species
in
further
analysis
was
species_Parabacteroides_unclassified
(0-0.4);
0.029].
Heterogeneity
(P
>
0.05)
pleiotropy
analyses
confirmed
robustness
MR
results.
The Journal of Physiology,
Journal Year:
2025,
Volume and Issue:
unknown
Published: Jan. 13, 2025
Important
health
disparities
are
observed
in
the
prevalence
of
obesity
and
associated
non-communicable
diseases
(NCDs),
including
type
2
diabetes
(T2D)
metabolic
dysfunction-associated
steatotic
liver
disease
(MASLD)
among
ethnic
groups.
Yet,
underlying
factors
accounting
for
these
remain
poorly
understood.
Fructose
has
been
widely
proposed
as
a
potential
mediator
NCDs,
given
that
hepatic
fructose
catabolism
can
result
deleterious
effects,
insulin
resistance
steatosis.
Moreover,
fermentation
by
gut
microbiota
produce
metabolites
such
ethanol
acetate,
both
which
serve
substrates
de
novo
lipogenesis
(DNL)
could
therefore
contribute
to
development
conditions.
Significant
inter-ethnic
differences
composition
have
observed.
consumption
varies
across
groups,
intake
demonstrated
significantly
alter
composition,
influence
its
fermenting
properties
effects.
Therefore,
may
be
influenced
variations
consumption,
disparities.
This
review
provides
an
overview
complex
interactions
between
host
microbial
catabolism,
role
ethnicity
shaping
processes
their
impact
on
health.
Understanding
provide
insights
into
mechanisms
driving
improve
personalized
nutrition
strategies.
KEY
POINTS:
Dietary
increased
substantially
over
recent
decades,
with
rising
(NCDs)
disease.
Pronounced
different
groups
NCD
dietary
underscore
need
elucidate
Together
well-known
toxic
effects
emerging
evidence
highlights
small
intestinal
sugars
like
various
bacterial
products
There
significant
that,
combined
varying
mediate
To
comprehensively
understand
mediating
fructose-induced
adverse
future
research
should
focus
microbiota.
Future
-
account
habits
mentioned
Clinical Microbiology Reviews,
Journal Year:
2025,
Volume and Issue:
unknown
Published: April 22, 2025
SUMMARY
Recent
advances
in
therapeutic
probiotics
have
shown
promising
results
across
various
health
conditions,
reflecting
a
growing
understanding
of
the
human
microbiome’s
role
and
disease.
However,
comprehensive
reviews
integrating
diverse
effects
subjects
been
limited.
By
analyzing
randomized
controlled
trials
(RCTs)
meta-analyses,
this
review
provides
overview
key
developments
probiotic
interventions
targeting
gut,
liver,
skin,
vaginal,
mental,
oral
health.
Emerging
evidence
supports
efficacy
specific
strains
combinations
treating
wide
range
disorders,
from
gastrointestinal
(GI)
liver
diseases
to
dermatological
bacterial
vaginosis,
mental
diseases.
We
discuss
expanding
microbiome-organ
connections
underlying
mechanisms
action.
While
many
clinical
demonstrate
significant
benefits,
we
acknowledge
areas
requiring
further
large-scale
studies
establish
definitive
optimal
treatment
protocols.
The
addresses
challenges
standardizing
research
methodologies
emphasizes
importance
considering
individual
variations
microbiome
composition
host
genetics.
Additionally,
explore
emerging
concepts
such
as
oral-gut-brain
axis
future
directions,
including
high-resolution
profiling,
host-microbe
interaction
studies,
organoid
models,
artificial
intelligence
applications
research.
Overall,
offers
update
on
current
state
multiple
domains
health,
providing
insights
into
directions
potential
for
revolutionize
preventive
medicine.
Genome Medicine,
Journal Year:
2025,
Volume and Issue:
17(1)
Published: May 8, 2025
The
microbiome
of
adolescents
is
poorly
understood,
as
are
factors
influencing
its
composition.
We
aimed
to
describe
the
healthy
adolescent
and
identify
early-life
concurrent
predictors
performed
metagenomic
sequencing
247
fecal
specimens
from
167
aged
11-14
years
participating
in
Health
Outcomes
Measures
Environment
(HOME)
Study,
a
longitudinal
pregnancy
birth
cohort
(Cincinnati,
OH).
described
common
features
gut
applied
self-organizing
maps
(SOMs)-a
machine-learning
approach-to
distinct
microbial
profiles
(n
=
4).
Using
prospectively
collected
data
on
sociodemographic
characteristics,
lifestyle,
diet,
sexual
maturation,
we
identified
associated
with
diversity
phylum
relative
abundance
linear
regression
models
composition
Kruskal-Wallis
Fisher's
exact
tests.
found
that
household
income
other
were
consistent
microbiome,
higher
lower
differential
abundances
Firmicutes
(increased)
Actinobacteria
(decreased).
Sexual
chronological
age,
was
related
females
differences
compositional
both
males
females.
Our
study
suggests
adolescence
unique
window
for
it
may
be
shaped
by
exposures,
highlighting
potential
future
epidemiologic
research.
Frontiers in Microbiology,
Journal Year:
2023,
Volume and Issue:
14
Published: Dec. 11, 2023
The
role
of
the
microbiome
in
asthma
is
highlighted,
considering
its
influence
on
immune
responses
and
connection
to
alterations
asthmatic
patients.
In
this
context,
we
review
variables
influencing
phenotypes
from
a
perspective
provide
insights
into
microbiome's
pathogenesis.
Previous
cohort
studies
patients
with
have
shown
that
presence
genera
such
as
Bifidobacterium,
Lactobacillus,
Faecalibacterium,
Bacteroides
gut
has
been
associated
protection
against
disease.
While,
other
Haemophilus,
Streptococcus,
Staphylococcus,
Moraxella
respiratory
implicated
pathogenesis,
indicating
potential
link
between
microbial
dysbiosis
development
asthma.
Furthermore,
infections
demonstrated
impact
composition
upper
tract
microbiota,
increasing
susceptibility
bacterial
diseases
potentially
triggering
exacerbations.
By
understanding
interplay
asthma,
valuable
disease
mechanisms
can
be
gained,
leading
novel
therapeutic
approaches.