Molecular Cancer,
Journal Year:
2022,
Volume and Issue:
21(1)
Published: Feb. 8, 2022
Abstract
Background
PTEN
is
one
of
the
most
frequently
mutated
genes
in
human
cancer.
Although
roles
canonical
protein
and
isoforms
have
been
extensively
explored,
current
understanding
family
members
cannot
fully
illustrate
diversity
their
biological
processes
tumor
development.
Notably,
function
noncoding
RNAs
arising
from
has
less
elucidated.
Methods
We
searched
circBase
circInteractome
to
analyze
potential
for
generating
circRNAs.
Then,
Sanger
sequencing,
RNase
R
Actinomycin
D
assays
were
used
verify
ring
structure
circPTEN1.
In
situ
hybridization
qRT-PCR
determine
level
circPTEN1
peritumor
tissues
colorectal
cancer
(CRC).
Furthermore,
functional
experiments,
including
Transwell
assay,
3D
multicellular
spheroid
invasion
assay
metastasis
models,
performed
using
knockdown
overexpression
cell
lines
vitro
vivo
investigate
effects
on
CRC.
Mechanistically,
luciferase
reporter
fluorescence
hybridization,
electrophoretic
mobility
shift
RNA
immunoprecipitation,
pull-down
mass
spectrometry
executed.
Results
identified
a
circular
generated
gene,
designated
circPTEN1,
that
downregulated
cancer,
decreased
expression
predicts
poor
survival.
Low
promotes
PDX
models
accelerates
vitro,
whereas
reveals
opposite
roles.
Mechanically,
we
found
capable
binding
MH2
domain
Smad4
disrupt
its
physical
interaction
with
Smad2/3,
which
reduces
formation
subsequent
nucleus
translocation
Smad
complexes
consequently
suppresses
downstream
associated
epithelial-mesenchymal
transition
upon
TGF-β
stimulation.
eIF4A3
cyclization
by
directly
flanking
region.
Conclusions
Our
study
uncovered
novel
gene-generated
circRNA
suppression
function,
further
revealed
mechanism
CRC
mediated
TGF-β.
The
identification
provides
new
direction
investigation,
elucidation
circPTEN1/TGF-β/Smad
signaling
may
pave
way
development
therapeutic
strategy
progression.
Experimental & Molecular Medicine,
Journal Year:
2023,
Volume and Issue:
55(7), P. 1357 - 1370
Published: July 3, 2023
Abstract
Metabolic
reprogramming
and
epigenetic
modifications
are
hallmarks
of
cancer
cells.
In
cells,
metabolic
pathway
activity
varies
during
tumorigenesis
progression,
indicating
regulated
plasticity.
changes
often
closely
related
to
changes,
such
as
alterations
in
the
expression
or
epigenetically
modified
enzymes,
which
may
exert
a
direct
an
indirect
influence
on
cellular
metabolism.
Therefore,
exploring
mechanisms
underlying
regulating
tumor
cell
metabolism
is
important
for
further
understanding
pathogenesis.
Here,
we
mainly
focus
latest
studies
regulations,
including
glucose,
lipid
amino
acid
context,
then
emphasize
modifications.
Specifically,
discuss
role
played
by
DNA
methylation,
chromatin
remodeling,
noncoding
RNAs
histone
lactylation
growth
progression.
Finally,
summarize
prospects
potential
therapeutic
strategies
based
Cancer Communications,
Journal Year:
2022,
Volume and Issue:
42(11), P. 1049 - 1082
Published: Oct. 20, 2022
Reversible,
spatial,
and
temporal
regulation
of
metabolic
reprogramming
epigenetic
homeostasis
are
prominent
hallmarks
carcinogenesis.
Cancer
cells
reprogram
their
metabolism
to
meet
the
high
bioenergetic
biosynthetic
demands
for
vigorous
proliferation.
Epigenetic
dysregulation
is
a
common
feature
human
cancers,
which
contributes
tumorigenesis
maintenance
malignant
phenotypes
by
regulating
gene
expression.
The
epigenome
sensitive
changes.
Metabolism
produces
various
metabolites
that
substrates,
cofactors,
or
inhibitors
enzymes.
Alterations
in
pathways
fluctuations
intermediate
convey
information
regarding
intracellular
status
into
nucleus
modulating
activity
enzymes
thus
remodeling
landscape,
inducing
transcriptional
responses
heterogeneous
requirements.
regulated
machinery
at
both
post-transcriptional
levels.
modifiers,
chromatin
remodelers
non-coding
RNAs
integral
contributors
regulatory
networks
involved
cancer
metabolism,
facilitating
transformation.
However,
significance
close
connection
between
epigenetics
context
has
not
been
fully
deciphered.
Thus,
it
will
be
constructive
summarize
update
emerging
new
evidence
supporting
this
bidirectional
crosstalk
deeply
assess
how
abnormalities
could
exploited
optimize
treatment
paradigms
establish
therapeutic
options.
In
review,
we
central
mechanisms
reciprocally
modulate
each
other
elaborate
upon
major
contributions
interplays
aberrations
rewiring
initiation
development.
Finally,
highlight
potential
opportunities
hematological
malignancies
solid
tumors
targeting
epigenetic-metabolic
circuit.
summary,
endeavored
depict
current
understanding
coordination
these
fundamental
more
comprehensively
provide
perspectives
utilizing
targets
treatment.
Advanced Science,
Journal Year:
2022,
Volume and Issue:
9(8)
Published: Jan. 24, 2022
Previous
studies
have
identified
the
regulatory
roles
of
circular
RNAs
(circRNAs)
in
human
cancers.
However,
molecular
mechanisms
circRNAs
hepatocellular
carcinoma
(HCC)
remain
largely
unknown.
This
study
screens
expression
profile
HCC
and
identifies
circVAMP3
as
a
significantly
downregulated
circRNA
tissues.
patients
with
low
present
poor
prognosis.
negatively
regulates
proliferation
metastasis
cells
vitro
vivo
by
driving
phase
separation
CAPRIN1
promoting
stress
granule
formation
cells,
which
can
downregulate
protein
level
Myc
proto-oncogene
inhibiting
c-Myc
translation.
Furthermore,
is
widely
expressed
many
tissues
related
Therefore,
potential
prognostic
indicator
for
may
serve
therapeutic
target
treatment.
Molecular Cancer,
Journal Year:
2022,
Volume and Issue:
21(1)
Published: March 29, 2022
Abstract
Background
Hypoxia
has
long
been
considered
as
a
hallmark
of
solid
tumors
and
is
closely
associated
with
tumor
progression.
Circular
RNAs
(circRNAs)
have
identified
critical
modulator
in
various
cancers.
However,
the
connections
between
hypoxia
circRNAs
are
largely
unknown.
Methods
Here,
we
investigated
expression
profile
breast
cancer
(BC)
MCF-7
cells
under
normoxia
using
microarray.
We
novel
hypoxia-responsive
circRNA
named
circWSB1,
whose
pattern,
potential
diagnostic
value
prognostic
significance
were
assessed
by
qRT-PCR
situ
hybridization.
Loss-
gain-of-function
investigations
vivo
vitro
performed
to
determine
biological
functions
circWSB1.
Mechanistically,
chromatin
immunoprecipitation
dual
luciferase
reporter
assays
carried
out
analyze
biogenesis
Furthermore,
biotin-labeled
RNA
pull-down,
mass
spectrometry,
immunoprecipitation,
fluorescent
hybridization,
electrophoretic
mobility
shift,
deletion-mapping,
co-immunoprecipitation
rescue
experiments
applied
investigate
interaction
circWSB1
Ubiquitin-specific
peptidase
10
(USP10)
well
relationship
USP10
p53.
Results
found
that
was
significantly
upregulated
BC
tissues
correlated
poor
clinical
outcomes,
which
might
serve
an
independent
factor
for
patients.
Ectopic
promoted
proliferation
cell
vivo.
transcriptionally
HIF1α
response
could
competitively
bind
deubiquitinase
prevent
access
p53
cells,
leading
degradation
progression
BC.
Conclusions
Taken
together,
our
findings
disclose
mechanism
hypoxia-inducible
interact
attenuate
mediated
stabilization
promote
BC,
providing
alternative
biomarker
therapeutic
target
Molecular Cancer,
Journal Year:
2022,
Volume and Issue:
21(1)
Published: Feb. 8, 2022
Abstract
Background
PTEN
is
one
of
the
most
frequently
mutated
genes
in
human
cancer.
Although
roles
canonical
protein
and
isoforms
have
been
extensively
explored,
current
understanding
family
members
cannot
fully
illustrate
diversity
their
biological
processes
tumor
development.
Notably,
function
noncoding
RNAs
arising
from
has
less
elucidated.
Methods
We
searched
circBase
circInteractome
to
analyze
potential
for
generating
circRNAs.
Then,
Sanger
sequencing,
RNase
R
Actinomycin
D
assays
were
used
verify
ring
structure
circPTEN1.
In
situ
hybridization
qRT-PCR
determine
level
circPTEN1
peritumor
tissues
colorectal
cancer
(CRC).
Furthermore,
functional
experiments,
including
Transwell
assay,
3D
multicellular
spheroid
invasion
assay
metastasis
models,
performed
using
knockdown
overexpression
cell
lines
vitro
vivo
investigate
effects
on
CRC.
Mechanistically,
luciferase
reporter
fluorescence
hybridization,
electrophoretic
mobility
shift
RNA
immunoprecipitation,
pull-down
mass
spectrometry
executed.
Results
identified
a
circular
generated
gene,
designated
circPTEN1,
that
downregulated
cancer,
decreased
expression
predicts
poor
survival.
Low
promotes
PDX
models
accelerates
vitro,
whereas
reveals
opposite
roles.
Mechanically,
we
found
capable
binding
MH2
domain
Smad4
disrupt
its
physical
interaction
with
Smad2/3,
which
reduces
formation
subsequent
nucleus
translocation
Smad
complexes
consequently
suppresses
downstream
associated
epithelial-mesenchymal
transition
upon
TGF-β
stimulation.
eIF4A3
cyclization
by
directly
flanking
region.
Conclusions
Our
study
uncovered
novel
gene-generated
circRNA
suppression
function,
further
revealed
mechanism
CRC
mediated
TGF-β.
The
identification
provides
new
direction
investigation,
elucidation
circPTEN1/TGF-β/Smad
signaling
may
pave
way
development
therapeutic
strategy
progression.