Cited by Seasonal dynamics of bacterial communities in a highly polluted coastal lagoon: Dominance of sulfur bacteria in response to elevated H2S levels

Together throughout the year: seasonal patterns of bacterial and eukaryotic microbial communities in a macrotidal estuary DOI

Vincent Hervé, Jérôme Morelle, Josie Lambourdière

et al.

Environmental Microbiome, Journal Year: 2025, Volume and Issue: 20(1)

Published: Jan. 20, 2025

Abstract Background Estuaries are complex ecosystems linking river and marine environments, where microorganisms play a key role in maintaining ecosystem functions. In the present study, we investigated monthly 8 sites at two depth layers over one-year period bacterial eukaryotic community dynamics along Seine macrotidal estuary (Normandy, France). To date, taxonomy of microbial diversity this anthropized remains elusive drivers structure still unknown. Results The metabarcoding analysis 147 samples revealed both high diversity, dominated by Proteobacteria, Bacteriodota, Actinobacteriota Bacillariophyta, Spirotrichea, Dinophyceae, respectively. Along only detected significant spatial patterns compositions for three months out twelve, However, found clear seasonal effect on communities driven physical chemical variables that were fluctuating year (temperature, irradiance, flow). Biotic associations also alpha beta diversity. Throughout year, identified diverse abundant core microbiota composed 74 41 OTUs. These regionally species include habitat generalists encompassing heterotrophs, phototrophs consumers. Yet, many these OTUs remain taxonomically functionally poorly assigned. Conclusions This molecular survey represents milestone understanding ecosystem, through identification putative markers functioning. It identifies seasons biotic as main reveals importance throughout year.

Language: Английский

Citations

Microbial interactions strengthen deterministic processes during community assembly in a subtropical estuary DOI

Ling Lin,

Jiangzhiqian Xiong,

Lihua Liu

et al.

The Science of The Total Environment, Journal Year: 2023, Volume and Issue: 906, P. 167499 - 167499

Published: Sept. 30, 2023

Language: Английский

Citations

Bioponic systems with biochar: Insights into nutrient recovery, heavy metal reduction, and microbial interactions in digestate-based bioponics DOI

Sumeth Wongkiew,

Satja Aksorn,

Suchana Amnuaychaichana

et al.

Waste Management, Journal Year: 2024, Volume and Issue: 178, P. 267 - 279

Published: Feb. 28, 2024

Language: Английский

Citations

Effects of polypropylene micro(nano)plastics on soil bacterial and fungal community assembly in saline-alkaline wetlands DOI

Lan Zhang, Guorui Zhang,

Ziyue Shi

et al.

The Science of The Total Environment, Journal Year: 2024, Volume and Issue: 945, P. 173890 - 173890

Published: June 15, 2024

Language: Английский

Citations

Divergent responses of abundant and rare bacterial communities to environmental variables in highly urbanized coastal regions: N-NO2- mediates the community assembly and co-occurrence networks DOI

Shanshan Ma, Linbo Zhang,

Longjie Zhang

et al.

Journal of Environmental Management, Journal Year: 2025, Volume and Issue: 378, P. 124764 - 124764

Published: March 4, 2025

Language: Английский

Citations

Graphene oxide inhibits the transfer of ARGs in rice by reducing the root endophytic bacterial complexity DOI

Ran Wu,

Hanche Xia,

Yue Wu

et al.

Journal of Environmental Management, Journal Year: 2024, Volume and Issue: 368, P. 122241 - 122241

Published: Aug. 25, 2024

Language: Английский

Citations

Stability characteristics of bacterial and protistan communities along an estuarine continuum: diversity, composition and co-occurrence networks DOI

Jianming Wu,

Lihua Niu,

Yi Li

et al.

Environmental Research, Journal Year: 2025, Volume and Issue: 269, P. 120920 - 120920

Published: Jan. 21, 2025

Language: Английский

Citations

Taxonomic dependency and spatial heterogeneity in assembly mechanisms of bacteria across complex coastal waters DOI

Huizhen Yan,

Dan-Dan Lin,

Gaoke Gu

et al.

Ecological Processes, Journal Year: 2024, Volume and Issue: 13(1)

Published: Jan. 22, 2024

Abstract Background Understanding community assembly mechanisms across taxa and space is fundamental for microbial ecology. However, the variability determinants of processes over remain unclear. Here, we investigated taxonomic dependency spatial heterogeneity in bacterial coastal waters East China Sea using neutral null models with customized visualization strategies. Results Overall, varied broad groups (phyla proteobacterial classes) at regional scale. A determinism–stochasticity balanced mechanism governed total assembly, while existed ecological processes. Among features, niche breadth negative-to-positive cohesion ratio were strongly associated determinism-to-stochasticity groups. Bacterial commonly exhibited heterogeneity, extent which Spatial bacteria was directly driven by many environmental factors potential interactions between taxa, but not geographic factors. higher more related to and/or (except Bacteroidetes), those lower features. Conclusions Our results confirm pervasiveness providing a finer understanding about regulation complex waters.

Language: Английский

Citations

Unlocking foraminiferal genetic diversity on estuarine mudflats with eDNA metabarcoding DOI

David Singer, Marie Fouet, Magali Schweizer

et al.

The Science of The Total Environment, Journal Year: 2023, Volume and Issue: 902, P. 165983 - 165983

Published: Aug. 4, 2023

Language: Английский

Citations

Mechanisms and responses of nitrogen transformations mediated by microbial communities in constructed tailwater wetlands to salinity stress DOI

Yifan Jiang, Zhengbo Yue,

Ding Ma

et al.

Journal of Water Process Engineering, Journal Year: 2023, Volume and Issue: 56, P. 104491 - 104491

Published: Nov. 8, 2023

Language: Английский

Citations