Abstract.
This
paper
describes
the
parameterization
and
calibration
of
an
end-to-end
Atlantis
model
for
Bay
Biscay,
characterising
spatially
structure
functioning
ecosystem.
The
Biscay
is
considered
rich
in
terms
ecological
diversity
different
oceanographic
events
such
as
coastal
upwelling,
run-off
river
plumes,
seasonal
currents,
take
place
area.
These
features,
addition
to
pressures
caused
by
human
activities
management
criteria,
demand
concurrent
modelling
all
characteristics
ecosystem
order
improve
our
understanding
system
its
functioning.
modelled
area
145
970
km2
was
divided
into
36
spatial
polygons,
each
with
multiple
vertical
layers.
composed
54
functional
groups,
ranging
from
primary
producers
top
predators.
Our
results
highlighted
importance
lower
trophic
levels
pelagic
how
interactions
among
phytoplankton
zooplankton
groups
impact
also
demonstrate
having
accurate
precise
data
biological
processes
showed
need
further
study
age-specific
biomass
weight
distribution
per
age
diet
between
juvenile
adult
fish
stages.
Overall,
has
been
shown
be
a
tool
that
potential
will
help
establishing
measures
activities.
Global Change Biology,
Journal Year:
2025,
Volume and Issue:
31(4)
Published: April 1, 2025
Climate
change
continues
to
alter
the
productivity
of
commercially
and
culturally
important
fisheries
with
major
consequences
for
food
security
coastal
economies.
We
provide
first,
multi-model
projections
changes
in
distribution
18
key
fish
stocks
across
seven
European
regional
seas
spanning
Mediterranean
Arctic,
using
11
state-of-the-art
bio-ecological
models.
Our
indicate
species-
region-specific
abundance
distributions
these
by
mid-
late
21st
century.
The
varied
responses
are
caused
differences
species'
physiology,
web
dynamics,
physical
habitat
characteristics.
Important
drivers
include
not
only
warming
Europe's
(from
1°C
3°C
RCP
4.5,
2°C
4°C
8.5
2100)
primary
but
also
oxygen-limited
growth,
pH,
benthic
dissolved
organic
carbon.
Warming
altered
levels
secondary
production
projected
lead
declines
some
(Norwegian
Barents
Sea
herring)
increases
others
(Bay
Biscay
anchovy).
While
temperate
cold-water
decline
markedly
regions
(e.g.,
North
Sea,
Western
Mediterranean),
immigration
species
from
south
and/or
increase
warm-water
may
offer
new
opportunities
fisheries.
Species-level
will
likely
have
ecosystem-level
that
yet
be
fully
assessed,
sub-areas
more
pronounced
due
local
processes
captured
projections.
Projections
consistent
despite
model
structures,
results
our
analysis
align
other
modelling
exercises
while
delving
into
details
often
overlooked
at
or
spatial
level.
This
represents
a
novel
approach
projecting
impacts
climate
on
fisheries,
which
should
considered
future
efforts
support
climate-ready
management
strategies
marine
stocks.
AMBIO,
Journal Year:
2022,
Volume and Issue:
51(7), P. 1687 - 1697
Published: Jan. 29, 2022
Abstract
Ecosystem-based
management
requires
understanding
of
food
webs.
Consequently,
assessment
web
status
is
mandatory
according
to
the
European
Union’s
Marine
Strategy
Framework
Directive
(MSFD)
for
EU
Member
States.
However,
how
best
monitor
and
assess
webs
in
practise
has
proven
a
challenging
question.
Here,
we
review
current
indicators
models,
discuss
whether
models
can
help
addressing
shortcomings
indicator-based
assessments,
using
Baltic
Sea
as
an
example
region.
We
show
that
although
MSFD
was
designed
use
alone,
they
are
currently
poorly
fit
purpose,
because
lack
interconnectivity
trophic
guilds.
then
argue
multiple
published
this
region
have
high
potential
provide
additional
coherence
definition
good
environmental
status,
evaluation
uncertainties,
estimates
unsampled
indicator
values,
but
also
identify
limitations
stand
way
more
formal
implementation
approach.
close
with
discussion
which
capacity
purpose
Sea,
forward
towards
combination
measurable
modelling
approaches
assessments.
Limnological Review,
Journal Year:
2024,
Volume and Issue:
24(1), P. 76 - 104
Published: Feb. 1, 2024
In
this
paper,
attention
is
drawn
to
the
deterioration
of
Romanian
surface
water
ecosystems
due
eutrophication,
an
important
environmental
issue
both
at
national
and
international
levels.
An
inventory
existing
studies
dealing
with
eutrophication
lakes
reservoirs
in
Romania
made,
aiming
identify
main
problems
facing
monitoring,
classifying,
managing
eutrophic
ecosystems.
On
Web
Science,
keyword
“Eutrophication”,
“Romania”
as
country/region,
leads
50
publications,
which
are
analyzed
review.
The
number
articles
found
does
not
reflect
real
represented
by
Romania.
At
a
level,
only
126
have
been
monitored
assessed
between
2018
2020,
terms
ecological
status/ecological
potential.
Thus,
global
evaluation,
77%
natural
33%
artificial
ones
do
reach
quality
objectives.
results
study
showed
that
frequency
measurements
taken
indicators
strongest
point
measurement
campaigns,
it
sufficient
for
diagnosis
lakes,
supplementary
measures
must
be
undertaken
better
understand
mitigate
phenomenon.
ICES Journal of Marine Science,
Journal Year:
2024,
Volume and Issue:
unknown
Published: Nov. 15, 2024
Abstract
In
many
areas
of
the
Baltic
Sea,
three-spined
stickleback
(Gasterosteus
aculeatus)
has
increased
several
fold
since
early
2000s.
Two
major
planktivores
Atlantic
herring
(Clupea
harengus)
and
European
sprat
(Sprattus
sprattus),
may
interact
with
via
competition
for
food
predation,
but
potential
implications
at
population
level
are
still
unknown.
Here,
we
explored
interactions
between
stickleback,
herring,
using
(i)
diet
analyses
(ii)
fish
biomass
estimates
from
hydroacoustics
2001–2019
covering
largest
Sea
basins—the
Central
Bothnian
Sea.
The
revealed
that
is
an
important
prey
large
along
Swedish
coast,
comprising
up
to
64%
individuals
>22
cm.
We
found
a
negative
influence
(>18
cm)
on
in
Baltic,
relationship
small
(<18
(pooled)
decline
after
mid-1990s
could
have
contributed
increase
reduced
predation
competition.
Overall,
be
underappreciated
piscivore,
high
fishing
pressure
generate
cascading
effects
lower
trophic
levels.
Ecological Modelling,
Journal Year:
2023,
Volume and Issue:
483, P. 110442 - 110442
Published: July 7, 2023
Ecosystem
models
can
play
a
supportive
and
informative
role
in
the
implementation
of
integrated
approaches
to
marine
resource
management.
Atlantis,
an
end-to-end
biogeochemical
ecosystem
model,
is
capable
exploring
wide
range
aspects
interactions.
To
aid
testing
development
Atlantis
as
central
tool
for
management
advance
global
partnerships
living
management,
second
International
Modeling
Summit
gathered
84
participants
from
13
countries
May
2022.
The
main
outcomes
2022
include:
fortifying
sense
community,
training
37
participants,
disseminating
tools
currently
available
needed
processing
inputs/outputs,
identifying
limitations
use-cases
moving
forward
with
research
pertaining
climate
change,
fisheries
synergies
artificial
intelligence
machine
learning.
Fisheries Research,
Journal Year:
2023,
Volume and Issue:
268, P. 106853 - 106853
Published: Sept. 18, 2023
The
management
of
the
western
Baltic
cod
relies
on
a
combination
regulation
tools,
including
seasonal
spawning
fishing
closure.
complex
population
dynamics
stock
have
nevertheless
been
posing
considerable
challenges
to
design
closures,
and
actual
benefits
closure
are
still
unclear.
Often,
only
biological
indicators
used
evaluate
effectiveness
closure,
without
considering
socio-economic
effects
fishery.
In
this
study,
we
applied
Species
Distribution
Model
(SDM)
integrating
commercial
fishery
research
survey
data
15-year
time
series
multiple
alternative
spatial
all
based
identifying
persistent
essential
fish
habitats
(i.e.,
nursery,
spawning,
feeding
grounds).
We
further
spatial-explicit
Management
Strategy
Evaluation
(MSE)
tool
DISPLACE
contrast
outcomes
these
identify
which
provided
optimal
balance
between
demands
sustainability.
Our
results
indicated
that
closures
benefitted
fisheries
stock.
Although
fishermen
redirected
their
effort
some
extent
other
stocks,
increased
profits
were
largely
driven
by
catches
as
consequence
reconstructed
structure
enhanced
biomass.
conclude
more
linked
size,
than
purpose
protecting
or
Ecology Of Freshwater Fish,
Journal Year:
2023,
Volume and Issue:
32(4), P. 750 - 764
Published: April 23, 2023
Abstract
The
Baltic
Sea
has
been
under
intense
environmental
changes
in
the
recent
decades,
such
as
climate
change,
eutrophication
and
increasing
abundance
of
top‐predators,
which
pose
serious
challenges
to
its
aquatic
life.
For
informed
conservation
measures
sustainable
yields,
we
need
understand
how
populations
are
being
affected.
Accordingly,
used
long‐term
data
series
(covering
period
between
1980
2021)
assess
these
have
affected
an
ecologically
economically
important
predatory
fish,
pikeperch
(
Sander
lucioperca
),
coastal
waters
Finland
northern
Sea.
We
investigated
estimates
recruitment,
commercial
recreational
catch
statistics
growth
mortality
rates.
found
a
clear
increase
total
catches
northernmost
part
Finnish
coast
(Bothnian
Bay)
that
were
not
explained
by
fishing
effort,
indicating
increased
abundance,
most
likely
due
higher
water
temperature.
In
southern
study
area
(Archipelago
Sea),
density‐dependent
factors
prevented
development
particularly
strong
year
classes,
despite
beneficial
conditions
warming
seawater
consecutive
warm
summers.
Individual
younger
age
groups,
contributing
upward
trend
spawning
population
biomass.
also
uncovered
declining
area,
abundances
cormorants
seals,
reduced
mortality.
These
results
show
is
one
species
has,
thus
far,
benefited
from
change
Sea,
strengthening
role
ecosystem.
Ecological Modelling,
Journal Year:
2022,
Volume and Issue:
471, P. 110038 - 110038
Published: June 14, 2022
The
northeast
United
States
Atlantis
model
(NEUSv2)
is
an
end-to-end
ecosystem
that
can
simulate
biogeochemical,
ecological,
fishery,
management,
and
socio-economic
processes
within
marine
ecosystems.
As
a
major
update
to
the
original
model,
NEUSv2
includes
changes
model's
functional
group
definitions
forcing
data.
first
use
satellite-ocean-color-derived
phytoplankton
size
class
was
tuned
specifically
for
region
force
primary
production.
Additionally,
physical
ocean
variables
(currents,
temperature,
salinity)
were
updated
using
high-resolution
global
reanalysis.
Despite
its
coarse
resolution,
capable
of
reproducing
broad
spatial
patterns
seen
in
biological
sources,
with
exception
some
circulation
features.
produced
plausible
zooplankton
planktivore
biomass,
stable
lower
trophic
food
web,
recent
trends
biomass.
meets
calibration
criteria
persistence
long-term
stability
Given
success
this
new
approach,
we
detail
observations
challenges
regarding
scale-related
processes,
data
assimilation,
calibration.
We
also
discuss
possible
tradeoffs
scope,
calibration,
availability
feedback
mechanisms.
This
hindcast
well
suited
exploring
ecosystem-level
sensitivity
testing
alternative
biogeochemical
forcing.
Further
developments
will
improve
performance
higher
levels.
Ecology and Evolution,
Journal Year:
2024,
Volume and Issue:
14(9)
Published: Sept. 1, 2024
Abstract
Successful
management
requires
information
on
pressures
that
threaten
a
species
and
areas
where
conservation
actions
are
needed.
The
Baltic
Proper
harbour
porpoise
population
was
first
listed
as
Critically
Endangered
by
the
International
Union
for
Conservation
of
Nature
in
2008.
Now,
16
years
later,
there
is
no
change
status
despite
ample
policy
calling
its
protection
an
urgent
need
action
to
protect
this
population.
Here,
we
provide
overview
current
population,
highlight
knowledge
gaps
impact
pressures,
make
recommendations
anthropogenic
activities.
Based
exceeded
limit
mortality,
high
concentrations
contaminants
Sea,
combined
with
reductions
prey
availability
increases
underwater
noise,
it
inferred
likely
still
decreasing
size
becomes
more
urgent.
As
bycatch
unprotected
explosions
result
direct
they
must
be
reduced
zero.
Inputs
contaminants,
waste,
existing
emerging
noise
sources
should
minimised
regulated.
Additionally,
ecosystem‐based
sustainable
fisheries
paramount
order
ensure
availability,
maintain
healthy
Sea.
Stranding
networks
routinely
assess
individuals
genetic
assignment
health
expanded,
identify
rare
samples
from
Knowledge
scarce
population‐level
each
threat,
along
cumulative
multiple
However,
instruments
sufficient
apply
effective
now.
While
main
pressure
impacting
needed
across
all
Extinction
choice:
decision‐makers
have
fate
genetically
biologically
distinct
marine
mammal
their
hands.