BMB Reports,
Journal Year:
2023,
Volume and Issue:
56(9), P. 469 - 481
Published: Aug. 14, 2023
The
gut
microbiome
is
widely
recognized
as
a
dynamic
organ
with
profound
influence
on
human
physiology
and
pathology.Extensive
epidemiological
longitudinal
cohort
studies
have
provided
compelling
evidence
that
disruptions
in
the
early-life
can
long-lasting
health
implications.Various
factors
before,
during,
after
birth
contribute
to
shaping
composition
function
of
neonatal
infant
microbiome.While
these
alterations
be
partially
restored
over
time,
metabolic
phenotypes
may
persist,
necessitating
research
identify
critical
period
for
early
intervention
achieve
phenotypic
recovery
beyond
composition.In
this
review,
we
provide
current
understanding
changes
microbiota
throughout
life
various
affecting
changes.Specifically,
highlight
impact
disruption
development
diseases
later
discuss
perspectives
efforts
recover
from
such
disruptions.
Frontiers in Endocrinology,
Journal Year:
2024,
Volume and Issue:
15
Published: July 9, 2024
The
prevalence
of
obesity
and
its
associated
comorbidities
has
surged
dramatically
in
recent
decades.
Especially
concerning
is
the
increased
rate
childhood
obesity,
resulting
diseases
traditionally
only
with
adulthood.
While
fundamentally
arises
from
energy
imbalance,
emerging
evidence
over
past
decade
revealed
involvement
additional
factors.
Epidemiological
murine
studies
have
provided
extensive
linking
parental
to
offspring
weight
subsequent
cardiometabolic
complications
Offspring
exposed
an
obese
environment
during
conception,
pregnancy,
and/or
lactation
often
exhibit
body
long-term
metabolic
health
issues,
suggesting
a
transgenerational
inheritance
disease
susceptibility
through
epigenetic
mechanisms
rather
than
solely
classic
genetic
mutations.
In
this
review,
we
explore
current
understanding
mediating
intergenerational
transmission
obesity.
We
delve
into
findings
regarding
both
paternal
maternal
shedding
light
on
underlying
potential
sex
differences
outcomes.
A
deeper
behind
holds
promise
for
enhancing
clinical
management
strategies
breaking
cycle
risk
across
generations.
Frontiers in Microbiology,
Journal Year:
2023,
Volume and Issue:
14
Published: Aug. 31, 2023
Microbial
dysbiosis
in
infancy
can
influence
long-term
health
outcomes
such
as
childhood
obesity.
The
aim
of
this
study
is
to
explore
relationships
among
maternal
well-being
during
pregnancy,
breastfeeding,
and
the
infant
gut
microbiome.This
a
secondary
analysis
healthy
pregnant
women
from
MicrobeMom
study,
double-blind
randomized
control
trial
probiotic
supplementation
(Bifidobacterium
breve
702258)
versus
placebo
antenatally
up
3
months
postpartum.
Maternal
was
assessed
using
WHO-5
index
at
16
weeks'
34
gestation.
Breastfeeding
practices
were
recorded
discharge
hospital
1
month
Infant
stool
samples
obtained
age.
Next
generation
shotgun
sequencing
determined
microbial
diversity.
Independent
sample
t-tests
Mann-Whitney
U
tests
informed
adjusted
regression
analysis,
which
for
delivery
mode,
antibiotics
delivery,
age
body
mass
(BMI),
vs.
group.Women
(n
=
118)
with
least
one
measure
on
average
33
years
(SD
3.93)
25.09
kg/m2
3.28)
BMI.
Exclusive
breastfeeding
initiated
by
65%
74).
Any
continued
69%
81)
after
month.
In
early
late
87%
97/111)
94%
107/114)
had
high
scores.
Well-being
not
associated
diversity
exclusive
beta
(PC2;
0.254,
95%
CI
0.006,
0.038).
At
postpartum,
any
alpha
(Shannon
index;
-0.241,
-0.498,
-0.060)
observed
species;
(-0.325,
-0.307,
-0.060),
0.319,
0.013,
0.045).
postpartum
-0.364,
-0.573,
-0.194;
Simpson
0.339,
0.027,
0.091),
infant's
number
species
(-0.271,
-0.172,
-0.037).Breastfeeding
lower
infants
potentially
beneficial
allow
greater
abundance
Bifidobacterium.ISRCTN53023014.
Microbial Biotechnology,
Journal Year:
2024,
Volume and Issue:
17(8)
Published: Aug. 1, 2024
Abstract
The
human
gut
microbiota
influences
its
host
via
multiple
molecular
pathways,
including
immune
system
interactions,
the
provision
of
nutrients
and
regulation
physiology.
Dietary
fibre
plays
a
crucial
role
in
maintaining
healthy
as
primary
nutrient
energy
source.
Industrialisation
has
led
to
massive
decrease
habitual
intake
recent
times,
intakes
across
world
are
below
national
recommendations.
This
goes
hand
with
other
factors
industrialised
societies
that
may
negatively
affect
microbiota,
such
medication
increased
hygiene.
Non‐communicable
diseases
on
rise
urbanised
optimisation
dietary
can
help
improve
global
health
prevent
disease.
Early
life
interventions
shape
developing
counteract
malnutrition,
both
context
nations
an
overabundance
cheap,
highly
processed
foods,
well
Low‐
Middle‐Income
Countries
(LMICs).
Adequate
should,
however,
be
maintained
course
promote
health.
Here
we
will
discuss
current
state
research
consider
different
intervention
approaches.
PeerJ,
Journal Year:
2025,
Volume and Issue:
13, P. e18915 - e18915
Published: Feb. 5, 2025
Background
Network
analysis
has
emerged
as
a
tool
for
investigating
interactions
among
species
in
community,
genes
or
proteins
within
cells,
across
different
types
of
data
(
e.g.
,
and
metabolites).
Two
aspects
networks
that
are
difficult
to
assess
the
statistical
robustness
network
whether
from
two
biological
systems
experimental
conditions
differ.
Methods
PyBootNet
is
user-friendly
Python
package
integrates
bootstrapping
correlation
construction.
The
offers
functions
generating
bootstrapped
metrics,
statistically
comparing
metrics
datasets,
visualizing
networks.
designed
be
accessible
efficient
with
minimal
dependencies
straightforward
input
requirements.
To
demonstrate
its
functionality,
we
applied
compare
derived
study
using
mouse
model
investigate
impacts
Polycystic
Ovary
Syndrome
(PCOS)
on
gut
microbiome.
includes
preprocessing,
bootstrapping,
matrix
calculation,
statistics
computation,
visualization.
Results
We
show
generates
robust
identifies
significant
differences
one
more
between
pairs
Our
previously
published
PCOS
microbiome
also
showed
our
uncovered
patterns
treatment
effects
missed
original
study.
provides
powerful
extendible
bioinformatics
solution
construction
can
microbes,
genes,
metabolites
other
appropriate
comparison
analysis.
JAMA Pediatrics,
Journal Year:
2025,
Volume and Issue:
unknown
Published: Feb. 10, 2025
This
Viewpoint
discusses
microbiome
restoration
by
vaginal
seeding
in
infants
born
cesarean
delivery
and
the
potential
of
to
mitigate
diseases
associated
with
birth.
mSystems,
Journal Year:
2025,
Volume and Issue:
unknown
Published: Feb. 21, 2025
ABSTRACT
Very
preterm
infants
(VPIs)
are
born
with
an
immature
gut
and
predisposed
to
microbiota
dysbiosis-related
diseases,
for
example,
necrotizing
enterocolitis.
Although
fortification
of
human
milk
is
required
these
infants,
the
optimal
fortifier
remains
uncertain.
Bovine
colostrum
(BC),
rich
in
protein
bioactive
components,
could
serve
as
alternative
conventional
fortifiers
(CF).
The
(GM)
225
VPIs
fed
fortified
either
BC
or
CF
(FortiColos
study,
NCT03537365)
was
profiled
by
16S
rRNA
gene
amplicon
sequencing
fecal
samples
collected
before,
after
1
2
weeks
fortification.
Birth
mode
exhibited
transient
effects
on
microbial
community
structure
shortly
birth,
cesarean
section-born
dominated
Firmicutes
,
whereas
vaginally
were
Proteobacteria
.
This
birth
mode-derived
difference
diminished
age
disappeared
around
month
birth.
Fortifier
type
affected
a
modest
extent,
but
no
specific
taxa
significantly
differed
between
groups.
Fecal
pH,
increased
BC,
positively
correlated
Staphylococcus
Corynebacterium
negatively
Bifidobacterium
abundance.
Change
relative
abundance
body
weight
gain.
Collectively,
does
influence
GM
only
extent
during
early
life.
appears
have
significant,
temporary
this
period.
IMPORTANCE
Early
life
key
period
establishment,
where
enteral
feeding
plays
significant
role.
also
case
preterm,
who,
due
their
gut,
at
high
risk
developing
diseases.
Human
feed
it
requires
reach
adequate
levels
especially
protein.
Only
few
studies
investigated
impact
development
infants.
Here,
we
demonstrate
that
two
different
bovine
milk-based
fortifiers,
based
mature
milk,
exhibit
limited
very
These
findings
suggest
although
great
care
terms
optimally
maturing
infant
should
be
taken,
choice
has
impact.
In
clinical
practice,
can
thus
fully
focussed
optimizing
nutrition.
CLINICAL
TRIALS
study
registered
ClinicalTrials.gov
NCT03537365
Pediatric Research,
Journal Year:
2025,
Volume and Issue:
unknown
Published: Feb. 28, 2025
Abstract
The
neonatal
microbiome
has
been
the
focus
of
considerable
research
over
past
two
decades
and
studies
have
added
fascinating
information
in
terms
early
microbial
patterns
how
these
relate
to
various
disease
processes.
One
difficulty
with
interpretation
relationships
is
that
such
data
associative
provides
little
proof
causality
or
underpinning
mechanisms.
Integrating
other
omics
as
proteome,
inflammatory
mediators,
metabolome
an
emerging
approach
address
this
gap.
Here
we
discuss
omics,
their
integration,
they
can
be
applied
improve
our
understanding,
treatment,
prevention
disease.
Impact
This
review
introduces
concept
multiomics
neonatology
technologies
integrated
We
highlight
considerations
for
performing
multiomic
neonates
need
validation
separate
cohorts
and/or
relevant
model
systems.
summarise
use
expanding
lay
out
steps
bring
clinic
enable
precision
medicine.
BMC Pregnancy and Childbirth,
Journal Year:
2025,
Volume and Issue:
25(1)
Published: March 8, 2025
Abstract
Background
Early
life
microbial
colonization
of
the
neonatal
gastrointestinal
tract
is
crucial
for
imprinting
immune
system.
Vertical
transmission
maternal
microbes
considered
key
source
initial
colonization.
We
aimed
to
evaluate
role
vaginal
and
rectal
microbiota
in
early
vaginally-
caesarean
section-born
neonates.
Methods
Maternal
swabs
were
collected
shortly
before
delivery.
Neonatal
fecal
samples
at
day
0,
7
28
postnatally
both
vaginally-born
(
n
=
23)
caesarean-section
born
40)
neonates
(total
63).
All
analyzed
by
16
S
rRNA
sequencing.
The
relative
abundances
amplicon
sequence
variants
(ASVs)
shared
between
compared
vaginally-versus
Results
median
abundance
ASVs
with
all
was
low
(below
10%
or
any
three
time-points).
When
focusing
on
versus
neonates,
there
no
differences
swabs,
only
p
0.002).
However,
delivery
routes,
ASV
swab
higher
(median
19%
2%
neonates)
(0%
28.
Conclusions
observed
that
a
limited
amount
transferred
from
compartments
tract.
contributed
gut
greater
extent
than
genital
one
month
age.
Our
findings
contribute
an
increased
understanding
factors
influencing
section
birth,
importance
as
characteristics
have
been
associated
health
outcomes
later
life.
Trial
registration
original
trial
registered
Dutch
Clinical
Registry
(Trial
number:
NTR6000,
https://www.trialregisternl/trial/5845
)
study
protocol
published
online.
iScience,
Journal Year:
2025,
Volume and Issue:
28(4), P. 112211 - 112211
Published: March 13, 2025
There
is
growing
interest
in
the
use
of
microbial-seeding
interventions
to
mitigate
impacts
prenatal
antibiotics,
C-section,
and
lack
breastfeeding
on
mother-child
microbe
sharing.
However,
relative
importance
maternal
vaginal
vs.
fecal
microbiota
this
process
unclear.
Analyzing
16S
rRNA
sequences
from
five
US
birth
cohorts,
we
found
that
became
more
similar
as
pregnancy
progressed,
both
niches
influenced
child's
microbiota.
The
contribution
increased
when
sampling
occurred
later
gestation.
As
children
aged
5
years,
their
increasingly
resembled
mother's
compared
Patterns
sharing
appeared
differ
by
antibiotic
use,
mode
(C-section
vaginal),
breastfeeding.
Our
findings
enhance
understanding
niche-specific
may
inform
interventions.
Metagenomic
studies
are
needed
identify
specific
shared
strains.