Population structure analysis to explore genetic diversity and geographical distribution characteristics of cultivated-type tea plant in Guizhou Plateau DOI Creative Commons

Zhifei Zhao,

Qinfei Song,

Dingchen Bai

et al.

BMC Plant Biology, Journal Year: 2022, Volume and Issue: 22(1)

Published: Jan. 27, 2022

Abstract Background Tea plants originated in southwestern China. Guizhou Plateau is an original center of tea plants, and rich germplasm resources. However, the genetic diversity, population structure distribution characteristics cultivated-type region are unknown. In this study, we explored diversity geographical accessions Plateau. Results We used 112,072 high-quality genotyping-by-sequencing to analyze principal components, phylogeny, structure, linkage disequilibrium, develop a core collection 253 plant from The results showed Genetic Pearl River Basin was significantly higher than that Yangtze Basin. Three inferred pure groups (CG-1, CG-2 CG-3) one admixture group (CG-4), were identified by analysis, verified component phylogenetic analyses. highest distance differentiation coefficients determined for vs CG-3. lower CG-4 CG-3, respectively. developed set primary set. sets contained 77.0 33.6% all individuals initial set, may serve as genome-wide association studies, while multiple treatment setting studies. Conclusions present study demonstrated Significant differences evolutionary direction detected between ancient landraces those Major rivers hubs largely responsible exchange well formation group. elucidated will facilitate further protection, breeding plants.

Language: Английский

Pre-harvest sprouting in cereals: genetic and biochemical mechanisms DOI
Tai Li,

Hong‐Jin Wang,

Xiaojing Xu

et al.

Journal of Experimental Botany, Journal Year: 2021, Volume and Issue: 72(8), P. 2857 - 2876

Published: Jan. 18, 2021

Abstract With the growth of global population and increasing frequency natural disasters, crop yields must be steadily increased to enhance human adaptability risks. Pre-harvest sprouting (PHS), a term mainly used describe phenomenon in which grains germinate on mother plant directly before harvest, is serious problem for agricultural production. After domestication, dormancy level cultivated crops was generally lower than that their wild ancestors. Although shortened period likely improved industrial performance cereals such as wheat, barley, rice, maize, excessive germination rate has caused frequent PHS areas with higher rainfall, resulting great economic losses. Here, we systematically review causes its consequences, major indicators methods assessment, emphasize biological significance Wheat quantitative trait loci functioning control are also comprehensively summarized meta-analysis. Finally, use Arabidopsis model develop more complete regulatory networks wheat. The integration this information conducive development custom-made lines suitable different demands regions, improving benefits.

Language: Английский

Citations

117

Comprehensive evaluation of mapping complex traits in wheat using genome-wide association studies DOI
Dinesh Kumar Saini, Yuvraj Chopra, Jagmohan Singh

et al.

Molecular Breeding, Journal Year: 2021, Volume and Issue: 42(1)

Published: Dec. 22, 2021

Language: Английский

Citations

105

Wheat breeding history reveals synergistic selection of pleiotropic genomic sites for plant architecture and grain yield DOI Creative Commons
Aili Li,

Chenyang Hao,

Zhenyu Wang

et al.

Molecular Plant, Journal Year: 2022, Volume and Issue: 15(3), P. 504 - 519

Published: Jan. 10, 2022

Language: Английский

Citations

95

Systematic identification of wheat spike developmental regulators by integrated multi-omics, transcriptional network, GWAS, and genetic analyses DOI Creative Commons
Xuelei Lin, Yongxin Xu, Dongzhi Wang

et al.

Molecular Plant, Journal Year: 2024, Volume and Issue: 17(3), P. 438 - 459

Published: Feb. 2, 2024

Language: Английский

Citations

18

The Genetics and Breeding of Heat Stress Tolerance in Wheat: Advances and Prospects DOI Creative Commons

Yuling Zheng,

Zhenyu Cai, Zheng Wang

et al.

Plants, Journal Year: 2025, Volume and Issue: 14(2), P. 148 - 148

Published: Jan. 7, 2025

Heat stress is one of the major concerns for wheat production worldwide. Morphological parameters such as germination, leaf area, shoot, and root growth are affected by heat stress, with physiological including photosynthesis, respiration, water relation. also leads to generation reactive oxygen species that disrupt membrane systems thylakoids, chloroplasts, plasma membrane. The deactivation photosystems, reduction in inactivation Rubisco affect photo-assimilates their allocation, consequently resulting reduced grain yield quality. development thermo-tolerant varieties most efficient fundamental approach coping global warming. This review provides a comprehensive overview various aspects related tolerance wheat, damages caused mechanisms tolerance, genes or QTLs regulating methodologies breeding cultivars high tolerance. Such insights essential developing potential response an increasingly warmer environment.

Language: Английский

Citations

5

Genomics-informed prebreeding unlocks the diversity in genebanks for wheat improvement DOI
Albert W. Schulthess, Sandip M. Kale, Fang Liu

et al.

Nature Genetics, Journal Year: 2022, Volume and Issue: 54(10), P. 1544 - 1552

Published: Oct. 1, 2022

Language: Английский

Citations

61

Wheat adaptation to environmental stresses under climate change: Molecular basis and genetic improvement DOI Creative Commons
Hude Mao, Cong Jiang, Chunlei Tang

et al.

Molecular Plant, Journal Year: 2023, Volume and Issue: 16(10), P. 1564 - 1589

Published: Sept. 9, 2023

Language: Английский

Citations

42

Whole-genome sequencing of diverse wheat accessions uncovers genetic changes during modern breeding in China and the United States DOI
Jianqing Niu, Shengwei Ma, Shusong Zheng

et al.

The Plant Cell, Journal Year: 2023, Volume and Issue: 35(12), P. 4199 - 4216

Published: Aug. 30, 2023

Breeding has dramatically changed the plant architecture of wheat (Triticum aestivum), resulting in development high-yielding varieties adapted to modern farming systems. However, how breeding shaped genomic this crop remains poorly understood. Here, we performed a comprehensive comparative analysis whole-genome resequencing panel 355 common accessions (representing diverse landraces and cultivars from China United States) at phenotypic levels. The genetic diversity was clearly reduced compared landraces. Consistent with these changes, most phenotypes States were significantly altered. Of 21 agronomic traits investigated, 8 showed convergent changes between 2 countries. Moreover, 207 loci associated traits, more than half overlapped regions that evidence selection. distribution selected Chinese American suggests for increased productivity accomplished by pyramiding both shared region-specific variants. This work provides framework understand adaptation agricultural production environments, as well guidelines optimizing strategies design better varieties.

Language: Английский

Citations

30

Genome resources for the elite bread wheat cultivar Aikang 58 and mining of elite homeologous haplotypes for accelerating wheat improvement DOI Creative Commons
Jizeng Jia,

Guangyao Zhao,

Danping Li

et al.

Molecular Plant, Journal Year: 2023, Volume and Issue: 16(12), P. 1893 - 1910

Published: Oct. 28, 2023

Language: Английский

Citations

29

Genome-wide association study unravels genomic regions associated with chlorophyll fluorescence parameters in wheat (Triticum aestivum L.) under different sowing conditions DOI
Santosh Gudi, Dinesh Kumar Saini, Priyanka Halladakeri

et al.

Plant Cell Reports, Journal Year: 2023, Volume and Issue: 42(9), P. 1453 - 1472

Published: June 20, 2023

Language: Английский

Citations

24