Elucidating the Biochemical Role of Novel Enzyme Targets in Neurodegenerative Disorders DOI Creative Commons

Abdullah Abbas Hamzah Al-Rubaye

Research Square (Research Square), Journal Year: 2023, Volume and Issue: unknown

Published: Oct. 19, 2023

Abstract Introduction: Neurodegenerative disorders, characterized by progressive neuronal loss, remain a significant clinical challenge due to their multifactorial etiology. While numerous enzymes have been implicated in pathogenesis, there remains knowledge gap regarding the precise biochemical roles of several novel enzyme targets. Methods: This study encompassed multi-pronged approach, involving patient-derived samples from Alzheimer's and Parkinson's cases (n=156), an ALS mouse model (n=50), CRISPR-Cas9 edited Huntington's Disease zebrafish (n=100). Enzyme activity assays, localization microscopy, interaction pathway analyses were conducted. Results: Elevated Aminotransferases was observed 78% compared controls (p<0.05). The revealed 30% reduction motor neuron counts tandem with altered (p<0.01). successfully displayed genetic markers post-CRISPR editing, indicating 95% editing efficiency. Furthermore, interactions between established neurodegenerative pathways identified. Conclusion: Mine findings highlight pivotal role targets offering potential avenues for early detection therapeutic interventions. intricate interplay these known disease underscores need integrated approach understand mechanisms holistically.

Language: Английский

Metabolomics‐driven approaches for identifying therapeutic targets in drug discovery DOI Creative Commons

Sophearith Pan,

Lichang Yin, Jie Liu

et al.

MedComm, Journal Year: 2024, Volume and Issue: 5(11)

Published: Nov. 1, 2024

Abstract Identification of therapeutic targets can directly elucidate the mechanism and effect drug therapy, which is a central step in development. The disconnect between protein phenotypes under complex mechanisms hampers comprehensive target understanding. Metabolomics, as systems biology tool that captures phenotypic changes induced by exogenous compounds, has emerged valuable approach for identification. A overview was provided this review to illustrate principles advantages metabolomics, delving into application metabolomics This outlines various metabolomics‐based methods, such dose–response stable isotope‐resolved multiomics, identify key enzymes metabolic pathways affected substances through dose‐dependent metabolite–drug interactions. Emerging techniques, including single‐cell artificial intelligence, mass spectrometry imaging, are also explored their potential enhance discovery. emphasizes metabolomics' critical role advancing our understanding disease accelerating targeted development, while acknowledging current challenges field.

Language: Английский

Citations

1

N-formylkynurenine but not kynurenine enters a nucleophile-scavenging branch of the immune-regulatory kynurenine pathway DOI Creative Commons
Yongxin Wang, Euphemia Leung, Petr Tomek

et al.

bioRxiv (Cold Spring Harbor Laboratory), Journal Year: 2024, Volume and Issue: unknown

Published: Nov. 16, 2024

Abstract Tryptophan catabolism along the kynurenine pathway (KP) mediates key physiological functions ranging from immune tolerance to lens UV protection, but contributory roles and chemical fates of individual KP metabolites are incompletely understood. This particularly concerns first metabolite, N-formylkynurenine (NFK), canonically viewed as a transient precursor downstream (KYN). Here, we challenge that canon show hydrolytic enzymes act rheostat switching fate NFK between canonical novel non-enzymatic branch tryptophan catabolism. In environment (37°C, pH 7.4), deaminated into electrophilic NFK- carboxyketoalkene (NFK-CKA), which rapidly (< 2 minutes) formed adducts with nucleophiles such cysteine glutathione, intracellular antioxidants. Serum hydrolases suppressed deamination they hydrolysed KYN ∼3 times faster than deaminates. Whilst did not deaminate, its product (KYN-CKA) reacted glutathione. The new transformations yet be confirmed highlight significance beyond hydrolysis suggests dominance over those in environments. Enzyme compartmentalisation abundance offer insights regulation emerging contributors regulation, protein modification, aging or neuropathology.

Language: Английский

Citations

1

Stable Isotope Tracing Experiments Using LC-MS DOI
Esther A. Zaal, Jeroen W. A. Jansen, Celia R. Berkers

et al.

Methods in molecular biology, Journal Year: 2024, Volume and Issue: unknown, P. 103 - 116

Published: Oct. 1, 2024

Language: Английский

Citations

0

Ketone body metabolism and cardiometabolic implications for cognitive health DOI Creative Commons
Kyle Fulghum,

Sebastian F. Salathe,

Xin C Davis

et al.

npj Metabolic Health and Disease, Journal Year: 2024, Volume and Issue: 2(1)

Published: Oct. 11, 2024

Cardiometabolic complications of obesity present a growing public health concern and are associated with poor outcomes, mediated in part by an increased risk for cardiovascular disease, metabolic dysfunction-associated fatty liver systemic insulin resistance. Recent studies support that both resistance also aberrant brain metabolism cognitive impairment similar to what is observed neurodegenerative diseases. Central these pathological outcomes adverse changes tissue glucose ketone body metabolism, suggesting regulation substrate utilization could be mechanistic link between the cardiometabolic progression decline. Here, we review physiological conditions emphasis on therapeutic potential bodies treating diseases lead We highlight recent findings associations among while providing theoretical framework which may promote positive preserve function.

Language: Английский

Citations

0

Elucidating the Biochemical Role of Novel Enzyme Targets in Neurodegenerative Disorders DOI Creative Commons

Abdullah Abbas Hamzah Al-Rubaye

Research Square (Research Square), Journal Year: 2023, Volume and Issue: unknown

Published: Oct. 19, 2023

Abstract Introduction: Neurodegenerative disorders, characterized by progressive neuronal loss, remain a significant clinical challenge due to their multifactorial etiology. While numerous enzymes have been implicated in pathogenesis, there remains knowledge gap regarding the precise biochemical roles of several novel enzyme targets. Methods: This study encompassed multi-pronged approach, involving patient-derived samples from Alzheimer's and Parkinson's cases (n=156), an ALS mouse model (n=50), CRISPR-Cas9 edited Huntington's Disease zebrafish (n=100). Enzyme activity assays, localization microscopy, interaction pathway analyses were conducted. Results: Elevated Aminotransferases was observed 78% compared controls (p<0.05). The revealed 30% reduction motor neuron counts tandem with altered (p<0.01). successfully displayed genetic markers post-CRISPR editing, indicating 95% editing efficiency. Furthermore, interactions between established neurodegenerative pathways identified. Conclusion: Mine findings highlight pivotal role targets offering potential avenues for early detection therapeutic interventions. intricate interplay these known disease underscores need integrated approach understand mechanisms holistically.

Language: Английский

Citations

0