Plant trait retrieval from hyperspectral data: Collective efforts in scientific data curation outperform simulated data derived from the PROSAIL model DOI Creative Commons

Daniel Mederer,

Hannes Feilhauer, Eya Cherif

et al.

ISPRS Open Journal of Photogrammetry and Remote Sensing, Journal Year: 2024, Volume and Issue: unknown, P. 100080 - 100080

Published: Dec. 1, 2024

Language: Английский

Reviews and syntheses: Remotely sensed optical time series for monitoring vegetation productivity DOI Creative Commons
Lammert Kooistra, Katja Berger, Benjamin Brede

et al.

Biogeosciences, Journal Year: 2024, Volume and Issue: 21(2), P. 473 - 511

Published: Jan. 25, 2024

Abstract. Vegetation productivity is a critical indicator of global ecosystem health and impacted by human activities climate change. A wide range optical sensing platforms, from ground-based to airborne satellite, provide spatially continuous information on terrestrial vegetation status functioning. As Earth observation (EO) data are usually routinely acquired, can be monitored repeatedly over time, reflecting seasonal patterns trends in metrics. Such metrics include gross primary productivity, net biomass, or yield. To summarize current knowledge, this paper we systematically reviewed time series (TS) literature for assessing state-of-the-art monitoring approaches different ecosystems based remote (RS) data. the integration solar-induced fluorescence (SIF) processing chains has emerged as promising source, also relatively recent sensor modality. We define three methodological categories derive remotely sensed TS indices quantitative traits: (i) trend analysis anomaly detection, (ii) land surface phenology, (iii) assimilation TS-derived into statistical process-based dynamic models (DVMs). Although majority used streams originate acquired satellite aircraft unoccupied aerial vehicles have found their way studies. facilitate processing, list common toolboxes inferring further discuss validation strategies RS derived metrics: (1) using situ measured data, such yield; (2) networks distinct sensors, including spectroradiometers, flux towers, phenological cameras; (3) inter-comparison Finally, address challenges propose conceptual framework derivation, fully integrated DVMs radiative transfer here labelled “Digital Twin”. This novel meets requirements multiple enables both an improved understanding temporal dynamics response environmental drivers enhances accuracy monitoring.

Language: Английский

Citations

22

Improving retrieval of leaf chlorophyll content from Sentinel-2 and Landsat-7/8 imagery by correcting for canopy structural effects DOI
Liang Wan, Youngryel Ryu, Benjamin Dechant

et al.

Remote Sensing of Environment, Journal Year: 2024, Volume and Issue: 304, P. 114048 - 114048

Published: Feb. 16, 2024

Language: Английский

Citations

20

Unveiling the transferability of PLSR models for leaf trait estimation: lessons from a comprehensive analysis with a novel global dataset DOI Creative Commons
Fujiang Ji, Fa Li, Dalei Hao

et al.

New Phytologist, Journal Year: 2024, Volume and Issue: 243(1), P. 111 - 131

Published: May 6, 2024

Summary Leaf traits are essential for understanding many physiological and ecological processes. Partial least squares regression (PLSR) models with leaf spectroscopy widely applied trait estimation, but their transferability across space, time, plant functional types (PFTs) remains unclear. We compiled a novel dataset of paired spectra, 47 393 records > 700 species eight PFTs at 101 globally distributed locations multiple seasons. Using this dataset, we conducted an unprecedented comprehensive analysis to assess the PLSR in estimating traits. While demonstrate commendable performance predicting chlorophyll content, carotenoid, water, mass per area prediction within training data efficacy diminishes when extrapolating new contexts. Specifically, locations, seasons, beyond leads reduced R 2 (0.12–0.49, 0.15–0.42, 0.25–0.56) increased NRMSE (3.58–18.24%, 6.27–11.55%, 7.0–33.12%) compared nonspatial random cross‐validation. The results underscore importance incorporating greater spectral diversity model boost its transferability. These findings highlight potential errors large spatial domains, diverse PFTs, time due biased validation schemes, provide guidance future field sampling strategies remote sensing applications.

Language: Английский

Citations

10

OpenForest: a data catalog for machine learning in forest monitoring DOI Creative Commons
Arthur Ouaknine, Teja Kattenborn, Étienne Laliberté

et al.

Environmental Data Science, Journal Year: 2025, Volume and Issue: 4

Published: Jan. 1, 2025

Abstract Forests play a crucial role in the Earth’s system processes and provide suite of social economic ecosystem services, but are significantly impacted by human activities, leading to pronounced disruption equilibrium within ecosystems. Advancing forest monitoring worldwide offers advantages mitigating impacts enhancing our comprehension composition, alongside effects climate change. While statistical modeling has traditionally found applications biology, recent strides machine learning computer vision have reached important milestones using remote sensing data, such as tree species identification, crown segmentation, biomass assessments. For this, significance open-access data remains essential data-driven algorithms methodologies. Here, we comprehensive extensive overview 86 datasets across spatial scales, encompassing inventories, ground-based, aerial-based, satellite-based recordings, country or world maps. These grouped OpenForest, dynamic catalog open contributions that strives reference all available datasets. Moreover, context these datasets, aim inspire research applied biology establishing connections between contemporary topics, perspectives, challenges inherent both domains. We hope encourage collaborations among scientists, fostering sharing exploration diverse through application methods for large-scale monitoring. OpenForest is at following url: https://github.com/RolnickLab/OpenForest .

Language: Английский

Citations

1

Mapping functional diversity of canopy physiological traits using UAS imaging spectroscopy DOI Creative Commons
Emiliano Cimoli, Arko Lucieer, Zbyněk Malenovský

et al.

Remote Sensing of Environment, Journal Year: 2024, Volume and Issue: 302, P. 113958 - 113958

Published: Jan. 5, 2024

Plant functional diversity (FD) is a component of biodiversity linking plant traits to ecosystem processes (e.g., photosynthesis) and services gross primary production). Development remote sensing capabilities monitor forest FD across various spatio-temporal scales critical, especially in view increasing global climate anthropogenic pressures. Here, we focus on investigating the capability unoccupied aerial systems (UAS), acquiring imaging spectroscopy data high spatial (pixel size ≤0.1 m) spectral (band-width < 5 nm between 400 1000 nm) resolutions, map two trait-based metrics, namely, richness divergence, open sclerophyll forests at plot-scale (<0.2 km2). An emerging scalable kernel-based trait probability density (TPD) approach was implemented compute spatially explicit metrics different areal extents pixel sizes through resampled products. Narrow-band indices were utilized as proxies selected traits, including photoprotective zeaxanthin-to-antheraxanthin transformation ratio (VAZ), foliar pigments chlorophylls anthocyanins (Cab Cant). The combination high-resolution imagery TPDs presents suitable alternative traditional need for taxonomic information alleviates pixel-based mixing issues known affect metrics. A moving kernel (6 × 6 applied UAS data, allowed capture fine medium-scale drivers within-crown complex branching variance, topography, sun aspect, speciation. For same size, computed from coarsened pseudo-airborne products 2 found be 57–68% that derived Functional divergence did not portray substantial differences even though this metric further emphasized complexity surveyed open-forest sites. have potential become an efficient tool monitoring linked with key sites, validation support large-scale but less detailed airborne satellite Finally, study highlights sensitivity variations scale, resolution, TPD parametrization suggesting more research needed standardize protocols quantification temporal scales.

Language: Английский

Citations

7

The EnMAP spaceborne imaging spectroscopy mission: Initial scientific results two years after launch DOI Creative Commons
Sabine Chabrillat, Saskia Foerster, Karl Segl

et al.

Remote Sensing of Environment, Journal Year: 2024, Volume and Issue: unknown, P. 114379 - 114379

Published: Sept. 1, 2024

Language: Английский

Citations

6

KF-PLS: Optimizing Kernel Partial Least-Squares (K-PLS) with Kernel Flows DOI Creative Commons
Zina-Sabrina Duma, Jouni Susiluoto, Otto Lamminpää

et al.

Chemometrics and Intelligent Laboratory Systems, Journal Year: 2024, Volume and Issue: unknown, P. 105238 - 105238

Published: Oct. 1, 2024

Language: Английский

Citations

4

Grassland management and phenology affect trait retrieval accuracy from remote sensing observations DOI Creative Commons
Maksim Iakunin, Franziska Taubert, Reimund Goss

et al.

Ecological Informatics, Journal Year: 2025, Volume and Issue: 87, P. 103068 - 103068

Published: Feb. 16, 2025

Language: Английский

Citations

0

Canopy functional trait variation across Earth’s tropical forests DOI Creative Commons
Jesús Aguirre‐Gutiérrez, Sami W. Rifai, Xiongjie Deng

et al.

Nature, Journal Year: 2025, Volume and Issue: unknown

Published: March 5, 2025

Tropical forest canopies are the biosphere's most concentrated atmospheric interface for carbon, water and energy1,2. However, in Earth System Models, diverse heterogeneous tropical biome is represented as a largely uniform ecosystem with either singular or small number of fixed canopy ecophysiological properties3. This situation arises, part, from lack understanding about how why functional properties vary geographically4. Here, by combining field-collected data more than 1,800 vegetation plots tree traits satellite remote-sensing, terrain, climate soil data, we predict variation across 13 morphological, structural chemical trees, use this to compute map diversity forests. Our findings reveal that Americas, Africa Asia tend occupy different portions total trait space available American forests predicted have 40% greater richness African Asian Meanwhile, highest divergence-32% 7% higher forests, respectively. An uncertainty analysis highlights priority regions further collection, which would refine improve these maps. predictions represent ground-based remotely enabled global space.

Language: Английский

Citations

0

Transfer learning for enhancing the generality of leaf spectroscopic models in estimating crop foliar nutrients across growth stages DOI

Yurong Huang,

Wenqian Chen, Wei Tan

et al.

International Journal of Applied Earth Observation and Geoinformation, Journal Year: 2025, Volume and Issue: 139, P. 104481 - 104481

Published: March 17, 2025

Language: Английский

Citations

0