Cited by Spatial and Seasonal Patterns of Sediment Bacterial Communities in Large River Cascade Reservoirs: Drivers, Assembly Processes, and Co-occurrence Relationship

Distinct assembly mechanisms of microbial sub-communities with different rarity along the Nu River DOI

Song Zhang,

Kexin Li,

Jinming Hu

et al.

Journal of Soils and Sediments, Journal Year: 2022, Volume and Issue: 22(5), P. 1530 - 1545

Published: Feb. 14, 2022

Language: Английский

Citations

Effect of biochar application rate on changes in soil labile organic carbon fractions and the association between bacterial community assembly and carbon metabolism with time DOI

Husen Qiu,

Jieyun Liu,

Mohammad Reza Boorboori

et al.

The Science of The Total Environment, Journal Year: 2022, Volume and Issue: 855, P. 158876 - 158876

Published: Sept. 21, 2022

Language: Английский

Citations

Effect of PVC microplastics on soil microbial community and nitrogen availability under laboratory-controlled and field-relevant temperatures DOI

Hangru Shen,

Yuhan Sun,

Hongbing Duan

et al.

Applied Soil Ecology, Journal Year: 2022, Volume and Issue: 184, P. 104794 - 104794

Published: Dec. 30, 2022

Language: Английский

Citations

Global assembly of microbial communities DOI

Jianing Wang, Zhuo Pan,

Jianshui Yu

et al.

mSystems, Journal Year: 2023, Volume and Issue: 8(3)

Published: May 17, 2023

Different habitats harbor different microbial communities with elusive assembly mechanisms. This study comprehensively investigated the global mechanisms of and effects community-internal influencing factors using Earth Microbiome Project (EMP) data set. We found that deterministic stochastic processes contribute approximately equally to community assembly, and, specifically, generally play a major role in free-living plant-associated (but not plant corpus) environments, while are contributor animal-associated environments. In contrast microorganisms, functional genes, predicted from PICRUSt, is mainly attributed all communities. The sink source normally assembled similar mechanisms, core microorganisms specific environment types. On scale, positively related alpha diversity, interaction degree bacterial predatory-specific gene abundance. Our analysis provides panoramic picture regularities environment-typical assemblies. IMPORTANCE With development sequencing technologies, research topic ecology has evolved composition including relative contribution for formation maintenance diversity. Many studies have reported various habitats, but remain unknown. this study, we analyzed EMP set combined pipeline explore communities, sources construct microbes types, assembly. results provide rules assemblies, which enhances our understandings globally controlling diversity species coexistence.

Language: Английский

Citations

Community assembly mechanisms and co-occurrence patterns of nitrite-oxidizing bacteria communities in saline soils DOI

Xiang Li, Wenjie Wan,

Liuxia Zheng

et al.

The Science of The Total Environment, Journal Year: 2021, Volume and Issue: 772, P. 145472 - 145472

Published: Jan. 30, 2021

Language: Английский

Citations

Spatiotemporal dynamics of ammonia-oxidizing archaea and bacteria contributing to nitrification in sediments from Bohai Sea and South Yellow Sea, China DOI

Mingyue Li,

Hui He,

Tiezhu Mi

et al.

The Science of The Total Environment, Journal Year: 2022, Volume and Issue: 825, P. 153972 - 153972

Published: Feb. 18, 2022

Language: Английский

Citations

Different Responses of Bacteria and Microeukaryote to Assembly Processes and Co-occurrence Pattern in the Coastal Upwelling DOI

Wentao Zhu, Ming Zhu, Xiangbo Liu

et al.

Microbial Ecology, Journal Year: 2022, Volume and Issue: 86(1), P. 174 - 186

Published: Aug. 4, 2022

Language: Английский

Citations

Spatial dynamics of prokaryotic microbial communities in sediments of the Yellow Sea: Assembly process, co-occurrence relationships, and environmental implications DOI

Huiyuan Qi, Dan Huang,

Fenghe Wang

et al.

Journal of Environmental Management, Journal Year: 2022, Volume and Issue: 319, P. 115645 - 115645

Published: July 4, 2022

Language: Английский

Citations

Oral microbiota in periodontitis patients with and without type 2 diabetes mellitus and their shifts after the nonsurgical periodontal therapy DOI

Lan Wang,

Zhi Gao,

Zihan Zhao

et al.

Heliyon, Journal Year: 2023, Volume and Issue: 9(11), P. e22110 - e22110

Published: Nov. 1, 2023

ObjectiveTo investigate the shift in oral microbiota of periodontitis patients with and without type 2 diabetes mellitus (T2DM) undergoing nonsurgical periodontal treatment its implications.MethodsEleven chronic eleven from Second Affiliated Hospital Chongqing Medical University received were re-evaluated 3 months later. DNA saliva subgingival plaques was amplified sequenced using 16S ribosomal RNA (16S rRNA) gene sequencing for microbiome profiling. Clinical indexes at onset after therapy recorded compared.ResultsThe species richness dominant T2DM changed significantly both plaques. The condition also effectively improved three therapy. Glycemic control improved. Additionally, could increase microbial diversity proportion health-associated bacteria but a proportional reduction pathogenic T2DM. Network analysis revealed fewer links lower level centralization (CP) group treatment. However, more higher network density networks found CP + group, suggesting stable community treatment.ConclusionsThere significant differences structural composition reaction to between Nonsurgical can improve metabolic control, decrease pathogens conditions, help stabilize communities Furthermore, may be potential supplementary approach managing

Language: Английский

Citations

Microbial communities in tree root-compartment niches under Cd and Zn pollution: Structure, assembly process and co-occurrence relationship DOI

Wenli Xing,

Xu Gai, Feng Ju

et al.

The Science of The Total Environment, Journal Year: 2022, Volume and Issue: 860, P. 160273 - 160273

Published: Nov. 29, 2022

Language: Английский

Citations