Comparative analysis of the JRL gene family in the whole-genome of five gramineous plants DOI Creative Commons
Luping Gong, Yitong Lu, Yujie Wang

et al.

Frontiers in Plant Science, Journal Year: 2024, Volume and Issue: 15

Published: Dec. 24, 2024

The Jacalin-related lectins ( JRLs ) gene family play a crucial role in regulating plant development and responding to environmental stress. However, systematic bioinformatics analysis of the JRL Gramineae plants has been lacking. In this study, we identified 101 proteins from five species classified them into eight distinct clades. Most AtJRL clustered same group were differentiated proteins. protein motifs, structures domain revealed that genes diverse functions plants. Duplication events indicated tandem duplication significantly contributed expansion family, with most members underwent purifying selection. Tissue expression profile showed OsJRL highly expressed roots, while ZmJRL exhibited high inflorescences. Furthermore, level influenced by drought, cold, heat salt stresses, respectively, implying these important roles response various abiotic stresses. RT-qPCR results demonstrated OsJRL4 was up-regulated under PEG6000 NaCl OsJRL12 OsJRL26 down-regulated PEG6000. These findings provide comprehensive insights will facilitate further functional characterization JRLs.

Language: Английский

Omics-assisted crop improvement under abiotic stress conditions DOI Creative Commons
Ali Raza, Sunil S. Gangurde, Karansher Singh Sandhu

et al.

Plant Stress, Journal Year: 2024, Volume and Issue: unknown, P. 100626 - 100626

Published: Oct. 1, 2024

Language: Английский

Citations

5
Evolution and Function of MADS-Box Transcription Factors in Plants DOI Open Access
Zihao Zhang,

Wenhui Zou,

Peixia Lin

et al.

International Journal of Molecular Sciences, Journal Year: 2024, Volume and Issue: 25(24), P. 13278 - 13278

Published: Dec. 11, 2024

The MADS-box transcription factor (TF) gene family is pivotal in various aspects of plant biology, particularly growth, development, and environmental adaptation. It comprises Type I II categories, with the MIKC-type subgroups playing a crucial role regulating genes essential for both vegetative reproductive stages life. Notably, proteins can influence processes such as flowering, fruit ripening, stress tolerance. Here, we provide comprehensive overview structural features, evolutionary lineage, multifaceted functions, TFs responding to biotic abiotic stresses. We emphasize their implications crop enhancement, especially light recent advances understanding impact on sugarcane (Saccharum spp.), vital tropical crop. By consolidating cutting-edge findings, highlight potential avenues expanding our knowledge base enhancing genetic traits through functional genomics advanced breeding techniques. This review underscores significance achieving improved yields resilience agricultural contexts, positioning them promising targets future research science.

Language: Английский

Citations

1
Comparative analysis of the JRL gene family in the whole-genome of five gramineous plants DOI Creative Commons
Luping Gong, Yitong Lu, Yujie Wang

et al.

Frontiers in Plant Science, Journal Year: 2024, Volume and Issue: 15

Published: Dec. 24, 2024

The Jacalin-related lectins ( JRLs ) gene family play a crucial role in regulating plant development and responding to environmental stress. However, systematic bioinformatics analysis of the JRL Gramineae plants has been lacking. In this study, we identified 101 proteins from five species classified them into eight distinct clades. Most AtJRL clustered same group were differentiated proteins. protein motifs, structures domain revealed that genes diverse functions plants. Duplication events indicated tandem duplication significantly contributed expansion family, with most members underwent purifying selection. Tissue expression profile showed OsJRL highly expressed roots, while ZmJRL exhibited high inflorescences. Furthermore, level influenced by drought, cold, heat salt stresses, respectively, implying these important roles response various abiotic stresses. RT-qPCR results demonstrated OsJRL4 was up-regulated under PEG6000 NaCl OsJRL12 OsJRL26 down-regulated PEG6000. These findings provide comprehensive insights will facilitate further functional characterization JRLs.

Language: Английский

Citations

0