bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: Dec. 20, 2024
Abstract
The
progression
of
the
cell
cycle
is
regulated
by
expression
specific
genes
and
fluctuations
in
cellular
metabolic
states.
Previous
research
has
employed
cycle-based
transcriptomics,
proteomics,
metabolomics
analyses
to
identify
cycle-dependent
changes
at
gene
expression,
protein,
levels.
However,
role
protein
compartmentalization
regulating
function,
coupled
with
evidence
that
enzymes
can
localize
nucleus
influence
chromatin
states,
suggests
nuclear
metabolism
may
play
a
progression.
In
this
study,
we
developed
an
approach
resolve
during
unbiased
systematic
manner.
This
was
achieved
integrating
fluorescent
reporters
mass
spectrometry
imaging.
Our
investigation
focused
on
revealed
phosphatidylinositol
localizes
Moreover,
disruption
affects
distribution
4,5-bisphosphate,
alters
number
morphology
nucleoli,
influences
maintenance
distinct
heterochromatin
states
throughout
cycle.
Finally,
given
established
link
between
methionine
synthesis,
as
well
differential
impact
observed
histone
marks
when
perturbed,
proposed
pools
be
involved
decorate
Frontiers in Pharmacology,
Journal Year:
2024,
Volume and Issue:
14
Published: Jan. 11, 2024
Mitochondria
are
critical
for
cellular
energetic
metabolism,
intracellular
signaling
orchestration
and
programmed
death
regulation.
Therefore,
mitochondrial
dysfunction
is
associated
with
various
pathogeneses.
The
maintenance
of
homeostasis
functional
recovery
after
injury
coordinated
by
biogenesis,
dynamics
autophagy,
which
collectively
referred
to
as
quality
control.
There
increasing
evidence
that
mitochondria
important
targets
melatonin
exert
protective
effects
under
pathological
conditions.
Melatonin,
an
evolutionarily
conserved
tryptophan
metabolite,
can
be
synthesized,
transported
metabolized
in
mitochondria.
In
this
review,
we
summarize
the
role
damaged
elimination
energy
supply
regulating
control,
may
provide
new
strategies
clinical
treatment
mitochondria-related
diseases.
International Journal of Molecular Sciences,
Journal Year:
2025,
Volume and Issue:
26(6), P. 2678 - 2678
Published: March 16, 2025
Despite
the
substantial
advances
in
cancer
therapies,
developing
safe
and
effective
treatment
methodologies
is
critical.
Natural
(plant-derived
compounds),
such
as
flavonoids,
might
be
crucial
a
methodology
without
toxicity
toward
healthy
tissues.
Prunin
flavonoid
with
potential
to
used
biomedical
applications.
has
yet
undergo
thorough
scientific
research,
its
precise
molecular
mechanisms
of
action
remain
largely
unexplored.
This
review
summarizes
therapeutic
prunin
for
first
time,
focusing
on
underlying
an
anticancer
compound.
gained
significant
attention
due
antioxidant,
anti-inflammatory,
effects.
aims
unlock
how
functions
at
level
exert
effects,
primarily
modulating
key
cellular
pathways.
Furthermore,
we
have
discussed
prunin’s
adjunctive
therapy
conventional
treatments,
highlighting
ability
strengthen
responses
while
decreasing
drug
resistance.
Moreover,
discussion
probes
into
innovative
delivery
methods,
particularly
nanoformulations,
that
address
bioavailability,
solubility,
stability
limitations
optimize
application.
By
providing
comprehensive
analysis
properties,
this
stimulate
further
exploration
using
agent,
thereby
progressing
development
targeted,
selective,
safe,
methods.
Oncogene,
Journal Year:
2025,
Volume and Issue:
unknown
Published: March 25, 2025
Abstract
Birt-Hogg-Dubé
syndrome
(BHD)
patients
are
uniquely
susceptible
to
all
renal
tumor
subtypes.
However,
the
underlying
mechanism
of
carcinogenesis
is
unclear.
To
study
cancer
development
in
BHD,
we
used
human
proximal
kidney
(HK2)
cells
and
found
that
long-term
folliculin
(
FLCN
)
knockdown
was
required
increase
tumorigenic
potential
these
cells,
as
evidenced
by
formation
larger
spheroids
under
nonadherent
conditions.
Transcriptomic
proteomic
analyses
revealed
links
between
FLCN,
cell
cycle
control
DNA
damage
response
(DDR)
machinery.
In
addition,
HK2
lacking
had
an
altered
transcriptome
profile
enriched
genes.
G
1
/S
checkpoint
signaling
compromised
increased
protein
levels
cyclin
D1
(CCND1)
hyperphosphorylation
retinoblastoma
(RB1).
A
interactome
screen
binds
DNA-dependent
kinase
(DNA-PK).
This
novel
interaction
reversed
irradiation-responsive
manner.
Knockdown
caused
a
marked
γH2AX
RB1
phosphorylation.
The
both
CCND1
phosphorylated
remained
high
during
damage,
which
associated
with
defective
knockdown.
Furthermore,
Flcn
-knockdown
C.
elegans
were
arrest
damage.
work
loss
defects
BHD
could
contribute
their
risk
cancer.
Journal of Cell Science,
Journal Year:
2025,
Volume and Issue:
138(9)
Published: May 1, 2025
As
we
have
learned
more
about
mitochondria
over
the
past
decades,
including
their
essential
cellular
roles
and
how
altered
mitochondrial
biology
results
in
disease,
it
has
become
apparent
that
they
are
not
just
powerplants
pumping
out
ATP
at
whim
of
cell.
Rather,
dynamic
information
energy
processors
play
crucial
directing
dozens
processes
behaviors.
They
provide
instructions
to
enact
programs
regulate
various
operations,
such
as
complex
metabolic
networks,
signaling
innate
immunity,
even
control
cell
fate,
dictating
when
cells
should
divide,
differentiate
or
die.
To
help
current
future
generations
biologists
incorporate
dynamic,
multifaceted
nature
assimilate
modern
discoveries
into
scientific
framework,
need
a
21st
century
'rebranding'.
In
this
Opinion
article,
argue
be
considered
'Chief
Executive
Organelle'
-
CEO
PLoS Biology,
Journal Year:
2024,
Volume and Issue:
22(6), P. e3002678 - e3002678
Published: June 17, 2024
The
rates
at
which
mutations
accumulate
across
human
cell
types
vary.
To
identify
causes
of
this
variation,
are
often
decomposed
into
a
combination
the
single-base
substitution
(SBS)
“signatures”
observed
in
germline,
soma,
and
tumors,
with
idea
that
each
signature
corresponds
to
one
or
small
number
underlying
mutagenic
processes.
Two
such
signatures
turn
out
be
ubiquitous
types:
SBS
1,
consists
primarily
transitions
methylated
CpG
sites
thought
caused
by
spontaneous
deamination,
more
diffuse
5,
is
unknown
etiology.
In
cancers,
attributed
these
2
accumulates
linearly
age
diagnosis,
thus
have
been
termed
“clock-like.”
better
understand
clock-like
behavior,
we
develop
mathematical
model
includes
DNA
replication
errors,
unrepaired
damage,
damage
repaired
incorrectly.
We
show
mutational
can
exhibit
behavior
because
divisions
occur
constant
rate
and/or
remain
over
time,
distinct
sources
teased
apart
comparing
lineages
divide
different
rates.
With
goal
mind,
analyze
accumulation
multiple
types,
including
soma
as
well
male
female
germline.
find
no
detectable
increase
1
neurons
only
very
weak
assigned
but
significant
time
rapidly
dividing
cells,
suggesting
driven
rounds
occurring
relatively
fixed
rate.
contrast,
5
increases
all
postmitotic
ones,
indicating
it
independently
divisions;
observation
points
errors
repair
key
mechanism.
Thus,
two
“clock-like”
likely
origins,
set
division,
other
Cell Reports,
Journal Year:
2024,
Volume and Issue:
43(8), P. 114543 - 114543
Published: July 26, 2024
Mechanistic
Target
of
Rapamycin
Complex
1
(mTORC1)
is
a
master
metabolic
regulator
that
active
in
nearly
all
proliferating
eukaryotic
cells;
however,
it
unclear
whether
mTORC1
activity
changes
throughout
the
cell
cycle.
We
find
oscillates
from
lowest
mitosis/G1
to
highest
S/G2.
The
interphase
oscillation
mediated
through
TSC
complex
but
independent
major
known
regulatory
inputs,
including
Akt
and
Mek/Erk
signaling.
By
contrast,
suppression
mitosis
does
not
require
complex.
has
long
been
promote
progression
G1.
also
promotes
S
G2
important
for
satisfying
Chk1/Wee1-dependent
G2/M
checkpoint
allow
entry
into
mitosis.
low
G1
sensitizes
cells
autophagy
induction
response
partial
inhibition
or
reduced
nutrient
levels.
Together,
these
findings
demonstrate
differentially
regulated
cycle,
with
phase-specific
consequences
cells.
Materials & Design,
Journal Year:
2024,
Volume and Issue:
244, P. 113145 - 113145
Published: July 8, 2024
The
repair
of
secondary
critical
bone
defects
is
an
international
medical
challenge.
Bone
tissue
engineering
provides
methods
and
technology
for
repair.
regeneration
mechanism
serves
as
inspiration
the
material
structural
design
scaffolds.
In
terms
materials,
this
review
draws
from
biological
characteristics
host
cells
in
osteogenic
microenvironment
(including
osteoblast
lineage,
vascular
cell
inflammatory
cells,
etc.),
reviewing
regulatory
mechanisms
self-healing
proposing
autonomous
living
materials
scaffolds
which
prepared
by
in-situ
manufacturing.
Autonomous
regulate
migration,
proliferation
differentiation
real
time
releasing
steadily
long-term.
Regarding
structure,
we
functional
role
natural
structures
homeostasis,
providing
insights
into
bone-inspired
Due
to
conflict
between
mechanical
properties
ability,
proposes
assembled
They
can
prolong
half-life
provide
support
attachment
points
new
growth,
autonomously
microenvironment.
have
potential
advance
research
progress
field
pave
way
novel
clinical
treatments.
International Journal of Molecular Sciences,
Journal Year:
2025,
Volume and Issue:
26(9), P. 4445 - 4445
Published: May 7, 2025
Precise
modulation
of
the
cell
cycle
via
electromagnetic
(EM)
control
presents
a
groundbreaking
approach
for
cancer
therapy,
especially
in
development
personalized
treatment
strategies.
EM
fields
can
precisely
regulate
key
cellular
homeostatic
mechanisms
such
as
proliferation,
apoptosis,
and
repair
by
finely
tuning
parameters
like
frequency,
intensity,
duration.
This
review
summarizes
through
which
influence
dynamics,
highlighting
recent
developments
high-throughput
platforms
that
facilitate
precise
regulation.
Additionally,
integration
with
emerging
technologies
artificial
intelligence,
immunotherapy,
nanotechnology
is
explored,
collectively
enhancing
targeting
precision,
immune
activation,
therapeutic
efficacy.
A
systematic
analysis
existing
clinical
studies
indicates
technology
significantly
overcomes
challenges
tumor
heterogeneity,
microenvironment
complexity,
treatment-related
adverse
effects.
prospects
translation
future
research
directions,
emphasizing
its
critical
potential
core
element
individualized
multimodal