bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Oct. 20, 2023
Abstract
High-throughput
vertebrate
animal
model
systems
for
the
study
of
patient-specific
biology
and
new
therapeutic
approaches
aggressive
brain
tumors
are
currently
lacking,
urgently
needed.
Therefore,
to
build
a
patient-relevant
in
vivo
human
glioblastoma,
we
expressed
common
oncogenic
variants
including
activated
EGFR
vIII
PI3KCA
H1047R
under
control
radial
glial-specific
promoter
her4.1
syngeneic
tp53
loss-of-function
mutant
zebrafish.
Robust
tumor
formation
was
observed
prior
45
days
life,
had
gene
expression
signature
similar
glioblastoma
mesenchymal
subtype,
with
strong
inflammatory
component.
Within
early
stage
lesions,
an
endogenous
microenvironment,
visualized
infiltration
phagocytic
cells,
as
well
internalization
cells
by
mpeg1.1
:EGFP+
microglia/macrophages,
suggesting
negative
regulatory
pressure
pro-inflammatory
cell
types
on
growth
at
stages
initiation.
Furthermore,
CRISPR/Cas9-mediated
targeting
master
transcription
factors
irf7
or
irf8
led
increased
primary
context,
while
suppression
phagocyte
activity
enhanced
engraftment
following
transplantation
into
otherwise
immune-competent
zebrafish
hosts.
Altogether,
developed
genetically
relevant
harnessed
unique
advantages
live
imaging,
high-throughput
genetic
chemical
manipulations
highlight
important
suppressive
roles
innate
immune
system
initiation,
future
opportunities
discovery
optimizations.
Biomaterials Science,
Journal Year:
2024,
Volume and Issue:
12(6), P. 1346 - 1356
Published: Jan. 1, 2024
Blood–brain
barrier-crossing
dendrimers
for
glioma
imaging
diagnostics,
chemotherapy,
gene
therapy,
or
imaging-guided
therapy
have
been
concisely
reviewed
with
perspectives
briefly
discussed.
Science Translational Medicine,
Journal Year:
2023,
Volume and Issue:
15(716)
Published: Oct. 4, 2023
Clonal
evolution
drives
cancer
progression
and
therapeutic
resistance.
Recent
studies
have
revealed
divergent
longitudinal
trajectories
in
gliomas,
but
early
molecular
features
steering
posttreatment
remain
unclear.
Here,
we
collected
sequencing
clinical
data
of
initial-recurrent
tumor
pairs
from
544
adult
diffuse
gliomas
performed
multivariate
analysis
to
identify
predictors
three
glioma
subtypes.
We
found
that
CDKN2A
deletion
at
initial
diagnosis
preceded
necrosis
microvascular
proliferation
occur
later
stages
IDH-mutant
glioma.
Ki67
expression
was
positively
correlated
with
acquiring
hypermutation
recurrence
the
IDH-wild-type
In
all
subtypes,
MYC
gain
or
MYC-target
activation
associated
treatment-induced
recurrence.
To
predict
evolution,
constructed
CELLO2
(Cancer
EvoLution
for
LOngitudinal
version
2),
a
machine
learning
model
integrating
forecast
after
treatment.
successfully
stratified
patients
into
subgroups
distinct
prognoses
identified
high-risk
patient
group
featured
by
worse
post-progression
survival,
low-grade
IDH-mutant-noncodel
subtype.
then
chronic
temozolomide-induction
experiments
cell
lines
isogenic
patient-derived
gliomaspheres
demonstrated
temozolomide
resistance
promoting
hypermutation.
Mechanistically,
that,
binding
open
chromatin
transcriptionally
active
genomic
regions,
c-MYC
increases
vulnerability
key
mismatch
repair
genes
mutagenesis,
thus
triggering
This
study
reveals
under
therapy
provides
resource
precision
oncology
targeting
dynamics
gliomas.
Biomarker Research,
Journal Year:
2024,
Volume and Issue:
12(1)
Published: Oct. 7, 2024
Abstract
Background
Glioma
is
the
most
common
primary
malignant
tumor
in
brain,
and
even
with
standard
treatments
including
surgical
resection,
radiotherapy,
chemotherapy,
long-term
survival
rate
of
patients
remains
unsatisfactory.
Recurrence
one
leading
causes
death
glioma
patients.
The
molecular
mechanisms
underlying
recurrence
remain
unclear.
Methods
Our
study
utilized
single-cell
sequencing,
spatial
transcriptomics,
RNA-seq
data
to
identify
a
subtype
FN1
+
tumor-associated
macrophages
(FN1
TAMs)
associated
recurrence.
Results
This
revealed
an
increased
abundance
TAMs
recurrent
gliomas,
indicating
their
potential
involvement
as
critical
factor
A
negative
correlation
was
observed
between
gliomas
interval
time
recurrence,
suggesting
poor
prognosis
for
high
levels
TAMs.
Further
investigation
showed
that
were
enriched
hypoxic
regions,
implying
metabolic
changes
tumors
drive
production
recruitment
Additionally,
found
contribute
regulation
immunosuppressive
microenvironment
might
serve
indicator
patients’
sensitivity
immunotherapy.
Finally,
we
developed
user-friendly
website,
PRIMEG
(
http://www.szflab.site/PRIMEG/
),
exploring
immune
gliomas.
Conclusion
findings
highlight
providing
new
insights
into
therapeutic
targets.
Moreover,
hold
promise
predicting
therapy
response
aiding
more
precise
risk
stratification
MedComm,
Journal Year:
2025,
Volume and Issue:
6(5)
Published: April 22, 2025
ABSTRACT
Glioma
subtyping
is
crucial
for
treatment
decisions,
but
traditional
approaches
often
fail
to
capture
tumor
heterogeneity.
This
study
proposes
a
novel
framework
integrating
multiplex
immunohistochemistry
(mIHC)
and
machine
learning
glioma
prognosis
prediction.
185
patient
samples
from
the
Huashan
hospital
cohort
were
stained
using
multi‐label
mIHC
panel
analyzed
with
an
AI‐based
auto‐scanning
system
calculate
cell
ratios
determine
proportion
of
positive
cells
various
markers.
Patients
divided
into
two
cohorts
(training:
N
=
111,
testing:
74),
model
was
then
developed
validated
subtype
classification
The
identified
distinct
subtypes
significant
differences
in
prognosis,
clinical
characteristics,
molecular
profiles.
high‐risk
subtype,
associated
older
age,
poorer
outcomes,
astrocytoma/glioblastoma,
higher
grades,
elevated
mesenchymal
scores,
inhibitory
immune
microenvironment,
exhibited
IDH
wild‐type,
1p19q
non‐codeletion,
MGMT
promoter
unmethylation,
suggesting
chemotherapy
resistance.
Conversely,
low‐risk
characterized
by
younger
better
astrocytoma/oligodendroglioma,
lower
favorable
profiles
(IDH
mutation,
codeletion,
methylation),
indicated
sensitivity.
mIHC‐based
enables
rapid
classification,
facilitating
tailored
strategies
accurate
prediction,
potentially
improving
management
outcomes.
Frontiers in Immunology,
Journal Year:
2025,
Volume and Issue:
16
Published: Feb. 5, 2025
Background
Personalized
precision
medicine
(PPPM)
in
cancer
immunology
and
oncology
is
a
rapidly
advancing
field
with
significant
potential.
Gliomas,
known
for
their
poor
prognosis,
rank
among
the
most
lethal
brain
tumors.
Despite
advancements,
there
remains
critical
need
precise,
individualized
treatment
strategies.
Methods
We
conducted
comprehensive
analysis
of
RNA-seq
microarray
data
from
TCGA
GEO
databases,
supplemented
by
single-cell
RNA
sequencing
(scRNA-seq)
glioma
patients.
By
integrating
foundational
experiments,
we
investigated
molecular
variations
cellular
interactions
within
neural
cell
subpopulations
during
tumor
progression.
Results
Our
revealed
distinct
gene
expression
patterns
across
subpopulations.
Notably,
differentiation
trajectory
identified
NUSAP1
as
key
marker
terminal
subpopulation.
found
that
elevated
correlated
prompting
further
investigation
its
functional
role
through
both
animal
studies.
Conclusions
NUSAP1-based
risk
models
hold
potential
predictive
therapeutic
tools
personalized
treatment.
In-depth
exploration
NUSAP1’s
mechanisms
glioblastoma
could
enhance
our
understanding
response
to
immunotherapy,
suggesting
targeting
may
offer
benefits
Journal of Cellular and Molecular Medicine,
Journal Year:
2025,
Volume and Issue:
29(4)
Published: Feb. 1, 2025
ABSTRACT
Gliomas
are
the
most
ordinary
primary
virulent
brain
tumours
and
commonly
used
clinical
treatments
include
tumour
resection,
radiation
therapy
chemotherapy.
Although
significant
progress
has
been
made
in
recent
years
progression‐free
survival
(PFS)
overall
(OS)
for
patients
with
high‐grade
gliomas,
prognosis
remains
poor.
Chemoresistance
refers
to
phenomenon
of
decreased
sensitivity
cells
drugs,
resulting
reduced
or
ineffective
drug
efficacy,
is
an
important
cause
failure
Exosomes,
a
type
extracellular
vesicle,
secreted
by
cancer
various
stromal
microenvironment
(TME)
transfer
their
inclusions
cells,
increasing
chemoresistance.
Furthermore,
depletion
exosomes
reverses
certain
detrimental
effects
on
metabolism
restores
chemotherapeutic
agents.
Here,
we
summarised
correlation
between
resistance
agents
glioma
patients,
mechanisms
action
involved
value.
We
aimed
afford
new
thoughts
research,
diagnosis
intervention
chemoresistance
patients.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2025,
Volume and Issue:
unknown
Published: Feb. 17, 2025
Summary
Malignant
gliomas
follow
two
distinct
natural
histories:
de
novo
high
grade
tumors
such
as
glioblastoma,
or
lower
with
a
propensity
to
transform
into
disease.
Despite
differences
in
tumor
genotype,
both
entities
converge
on
common
histologically
aggressive
phenotype,
and
the
basis
for
this
progression
is
unknown.
Glioma
associated
macrophages
(GAM)
have
been
implicated
process,
however
GAMs
are
ontologically
transcriptionally
diverse,
rendering
isolation
of
pathogenic
subpopulations
challenging.
Since
macrophage
contextual
gene
programs
orchestrated
by
transcription
factors
acting
cis
-acting
promoters
enhancers
regulatory
networks
(GRN),
we
hypothesized
that
functional
populations
can
be
resolved
through
GRN
inference.
Here
show
via
parallel
single
cell
RNA
ATAC
sequencing
subpopulation
human
defined
centered
around
Activator
Protein-1
factor
FOSL2
preferentially
enriched
tumors.
Using
nominate
ANXA1
HMOX1
surrogate
surface
markers
activation,
thus
permitting
prospective
validation
GAMs.
These
cells,
termed
malignancy
(mGAMs)
pro-invasive,
pro-angiogenic,
pro-proliferative,
possess
intact
antigen
presentation
but
skew
T-cells
towards
CD4+FOXP3+
phenotype
under
hypoxia.
Ontologically,
mGAMs
share
somatic
mitochondrial
mutations
peripheral
blood
monocytes,
their
presence
correlates
disease
irrespective
underlying
mutation
status.
Furthermore,
spatio-temporally
occupy
metabolic
niches;
directly
induce
proliferation
mesenchymal
transition
low
glioma
cells
accelerate
growth
vivo
upon
co-culture.
Finally
patients
newly
transformed
regions
gliomas,
supporting
view
play
pivotal
role
may
represent
plausible
therapeutic
target
high-grade
glioma.
Journal of Advanced Research,
Journal Year:
2025,
Volume and Issue:
unknown
Published: May 1, 2025
Glioblastoma
(GBM),
also
known
as
glioblastoma
multiforme,
is
a
rapidly
growing
and
highly
invasive
malignant
tumor.
Due
to
the
inability
clearly
distinguish
between
normal
tissue,
surgery
cannot
achieve
safe
resection,
often
leading
poor
patient
prognosis
inevitable
tumor
recurrence.
According
previous
studies,
GBM
invasion
related
intercellular
adhesion,
matrix
degradation,
extracellular
its
adhesion
molecules,
well
molecular
of
protein
hydrolases
in
microenvironment
cells
stromal
cells.
The
aim
enhance
our
understanding
mechanisms
underlying
advance
research
on
targeted
therapies
for
inhibiting
invasion.
This
article
describes
that
may
affect
cell
invasion,
changes
cytoskeleton
during
motility,
regulatory
intracellular
signaling
pathways
In
addition,
we
explored
possibility
therapy
against
molecules
GBM.
MedComm,
Journal Year:
2024,
Volume and Issue:
5(11)
Published: Nov. 1, 2024
Abstract
Mutations
in
isocitrate
dehydrogenase
(IDH)
are
important
markers
of
glioma
prognosis.
However,
few
studies
have
examined
the
gene
expression
regulatory
network
(GRN)
IDH‐mutant
and
wild‐type
gliomas.
In
this
study,
single‐cell
RNA
sequencing
spatial
transcriptome
were
used
to
analyze
GRN
cell
subsets
patients
with
Through
transcriptional
regulation
analysis,
we
identified
M4
module,
whose
transcription
factor
activity
is
highly
expressed
IDH
gliomas
compared
IDH‐mutants.
Enrichment
analysis
revealed
that
these
genes
predominantly
microglia
macrophages,
significant
enrichment
interferon‐related
signaling
pathways.
Interferon
7
(IRF7),
a
within
pathway,
showed
highest
percentage
was
primarily
localized
core
region
tumors.
A
machine‐learning
prognostic
model
novel
subgroups
population.
Additionally,
IRF7
shown
promote
proliferation
migration
T98G
U251
cells
vitro,
its
knockdown
affected
vivo.
This
study
systematically
established
mechanism
at
level
drew
corresponding
map.
The
presents
map
for
gliomas,
involving
transcriptomics
identify
networks,
machine
learning
models
subtyping,
experimental
validation,
highlighting
role
progression.