Journal of Inflammation Research,
Journal Year:
2022,
Volume and Issue:
Volume 15, P. 1969 - 1989
Published: March 1, 2022
Purpose:
The
role
of
RNA
N6-methyladenosine
(m
6
A)
modification
in
the
progression
multiple
tumours
and
tumour
microenvironment
(TME)
has
been
progressively
demonstrated
promises
a
new
direction
for
therapy.
However,
there
have
no
reports
on
systematic
analyses
m
A
TME
non-small
cell
lung
cancer
(NSCLC).
Patients
Methods:
In
this
study,
we
used
unsupervised
cluster
analysis
to
identify
three
patterns
28
regulators
gene
signature
subgroups
commonly
differentially
expressed
genes
(co-DEGs)
patterns.
Quantifying
these
subtypes
using
ssGSEA
ESTIMATE
algorithms
characterise
immune
(TIME)
NSCLC.
Based
principal
component
(PCA),
co-DEGs
construct
scores
analyse
characteristics
modifications
individual
patients
assessed
practical
clinical
utility
nomogram
survival
prediction.
Results:
total
1210
NSCLC
samples
were
mainly
enriched
metabolic
biological
processes.
following
identified
based
TME:
inflammation,
evasion
desert.
calculated
significantly
positively
correlated
with
infiltration
negatively
mutational
burden
(TMB).
Survival
was
better
high-m
A-score
group
than
low-m
group,
score
could
be
as
an
independent
favourable
prognostic
factor.
addition,
assessment
both
checkpoint
inhibitors
(ICIs)
immunophenoscore
(IPS)
revealed
immunotherapeutic
effect
group.
Conclusion:
TIME
analysed
from
comprehensive
basis,
which
may
facilitate
development
more
effective
strategies.
Graphical
Abstract:
Keywords:
immunophenotype,
immunotherapy,
modification,
cancer,
Signal Transduction and Targeted Therapy,
Journal Year:
2022,
Volume and Issue:
7(1)
Published: Sept. 22, 2022
RNA
modifications
have
become
hot
topics
recently.
By
influencing
processes,
including
generation,
transportation,
function,
and
metabolization,
they
act
as
critical
regulators
of
cell
biology.
The
immune
abnormality
in
human
diseases
is
also
a
research
focus
progressing
rapidly
these
years.
Studies
demonstrated
that
participate
the
multiple
biological
processes
cells,
development,
differentiation,
activation,
migration,
polarization,
thereby
modulating
responses
are
involved
some
related
diseases.
In
this
review,
we
present
existing
knowledge
functions
underlying
mechanisms
modifications,
N6-methyladenosine
(m6A),
5-methylcytosine
(m5C),
N1-methyladenosine
(m1A),
N7-methylguanosine
(m7G),
N4-acetylcytosine
(ac4C),
pseudouridine
(Ψ),
uridylation,
adenosine-to-inosine
(A-to-I)
editing,
summarize
their
roles
Via
regulating
can
pathogenesis
diseases,
such
cancers,
infection,
inflammatory
autoimmune
We
further
highlight
challenges
future
directions
based
on
knowledge.
All
all,
review
will
provide
helpful
well
novel
ideas
for
researchers
area.
Molecular Cancer,
Journal Year:
2022,
Volume and Issue:
21(1)
Published: March 16, 2022
Abstract
N
6
-methyladenosine
(m
A)
is
the
most
abundant
epigenetic
modification
of
RNA,
and
its
dysregulation
drives
aberrant
transcription
translation
programs
that
promote
cancer
occurrence
progression.
Although
defective
gene
regulation
resulting
from
m
A
often
affects
oncogenic
tumor-suppressing
networks,
can
also
modulate
tumor
immunogenicity
immune
cells
involved
in
anti-tumor
responses.
Understanding
this
counterintuitive
concept
aid
design
new
drugs
target
to
potentially
improve
outcomes
immunotherapies.
Here,
we
provide
an
up-to-date
comprehensive
overview
how
modifications
intrinsically
affect
alterations
cell
extrinsically
responses
microenvironment
(TME).
We
review
strategies
for
modulating
endogenous
immunity
discuss
challenge
reshaping
TME.
Strategies
include:
combining
specific
efficient
inhibitors
against
regulators
with
checkpoint
blockers;
generating
effective
programmable
gene-editing
system
enables
manipulation
individual
sites;
establishing
enhance
T
or
natural
killer
cells;
using
nanoparticles
specifically
tumor-associated
macrophages
(TAMs)
deliver
messenger
RNA
small
interfering
A-related
molecules
repolarize
TAMs,
enabling
them
remodel
The
goal
help
field
understand
shape
TME
so
better
immunotherapy
be
designed
developed.
Molecular Cancer,
Journal Year:
2023,
Volume and Issue:
22(1)
Published: March 1, 2023
Abstract
N6-methyladenosine
(m
6
A)
methylation
is
the
most
universal
internal
modification
in
eukaryotic
mRNA.
With
elaborate
functions
executed
by
m
A
writers,
erasers,
and
readers,
modulation
involved
myriad
physiological
pathological
processes.
Extensive
studies
have
demonstrated
diverse
tumours,
with
effects
on
tumorigenesis,
metastasis,
resistance.
Recent
evidence
has
revealed
an
emerging
role
of
tumour
immunoregulation,
divergent
patterns
been
microenvironment.
To
depict
regulatory
immune
microenvironment
(TIME)
its
effect
evasion,
this
review
focuses
TIME,
which
characterized
hypoxia,
metabolic
reprogramming,
acidity,
immunosuppression,
outlines
A-regulated
TIME
evasion
under
stimuli.
Furthermore,
anti-tumour
cells
are
summarized.
Molecular Cancer,
Journal Year:
2024,
Volume and Issue:
23(1)
Published: June 20, 2024
Abstract
RNA
methylation,
a
prevalent
post-transcriptional
modification,
has
garnered
considerable
attention
in
research
circles.
It
exerts
regulatory
control
over
diverse
biological
functions
by
modulating
splicing,
translation,
transport,
and
stability.
Notably,
studies
have
illuminated
the
substantial
impact
of
methylation
on
tumor
immunity.
The
primary
types
encompass
N6-methyladenosine
(m6A),
5-methylcytosine
(m5C),
N1-methyladenosine
(m1A),
N7-methylguanosine
(m7G),
3-methylcytidine
(m3C).
Compelling
evidence
underscores
involvement
regulating
microenvironment
(TME).
By
affecting
translation
stability
through
"writers",
"erasers"
"readers",
influence
dysregulation
immune
cells
factors.
Consequently,
plays
pivotal
role
immunity
mediating
various
behaviors,
encompassing
proliferation,
invasion,
metastasis,
etc.
In
this
review,
we
discussed
mechanisms
several
methylations,
providing
comprehensive
overview
their
roles
underlying
within
among
immunocytes.
exploring
how
these
modifications
mediate
evasion,
also
examine
potential
applications
immunotherapy.
This
review
aims
to
provide
novel
insights
strategies
for
identifying
targets
advancing
cancer
immunotherapy
efficacy.
Molecular Cancer,
Journal Year:
2022,
Volume and Issue:
21(1)
Published: Feb. 21, 2022
Abstract
Accumulating
research
suggests
that
the
tumor
immune
microenvironment
(TIME)
plays
an
essential
role
in
regulation
of
growth
and
metastasis.
The
cellular
molecular
nature
TIME
influences
cancer
progression
metastasis
by
altering
ratio
immune-
suppressive
versus
cytotoxic
responses
vicinity
tumor.
Targeting
or
activating
components
show
a
promising
therapeutic
avenue
to
combat
cancer.
success
immunotherapy
is
both
astounding
unsatisfactory
clinic.
Advancements
RNA-based
technology
have
improved
understanding
complexity
diversity
its
effects
on
therapy.
TIME-related
RNA
regulators
could
be
targets
for
anticancer
immunotherapy.
In
this
review,
we
discuss
available
immunotherapies
targeting
TIME.
More
importantly,
summarize
potential
various
therapeutics
clinically
treatment.
RNA-dependent
TIME,
as
monotherapy
combined
with
other
evolving
therapeutics,
might
beneficial
patients’
treatment
near
future.
Journal of Hematology & Oncology,
Journal Year:
2022,
Volume and Issue:
15(1)
Published: July 6, 2022
Abstract
The
tumor
microenvironment
(TME),
which
is
regulated
by
intrinsic
oncogenic
mechanisms
and
epigenetic
modifications,
has
become
a
research
hotspot
in
recent
years.
Characteristic
features
of
TME
include
hypoxia,
metabolic
dysregulation,
immunosuppression.
One
the
most
common
RNA
N6-methyladenosine
(m
6
A)
methylation,
widely
involved
regulation
physiological
pathological
processes,
including
development.
Compelling
evidence
indicates
that
m
A
methylation
regulates
transcription
protein
expression
through
shearing,
export,
translation,
processing,
thereby
participating
dynamic
evolution
TME.
Specifically,
methylation-mediated
adaptation
to
phenotypic
shift
immune
cells
synergistically
promote
formation
an
immunosuppressive
supports
proliferation
metastasis.
In
this
review,
we
have
focused
on
involvement
tumor-adaptive
described
detailed
linking
change
cell
biological
functions.
view
collective
data,
advocate
treating
as
complete
ecosystem
components
crosstalk
with
each
other
achieve
adaptive
changes.
Finally,
describe
potential
utility
methylation-targeted
therapies
immunotherapy
clinical
applications
challenges
faced,
aim
advancing
research.
Molecular Cancer,
Journal Year:
2022,
Volume and Issue:
21(1)
Published: Dec. 14, 2022
Abstract
Cancer
drug
resistance
represents
the
main
obstacle
in
cancer
treatment.
Drug-resistant
cancers
exhibit
complex
molecular
mechanisms
to
hit
back
therapy
under
pharmacological
pressure.
As
a
reversible
epigenetic
modification,
N
6
-methyladenosine
(m
A)
RNA
modification
was
regarded
be
most
common
modification.
methyltransferases
(writers),
demethylases
(erasers),
and
m
A-binding
proteins
(readers)
are
frequently
disordered
several
tumors,
thus
regulating
expression
of
oncoproteins,
enhancing
tumorigenesis,
proliferation,
development,
metastasis.
The
review
elucidated
underlying
role
A
resistance.
Alteration
affected
efficacy
by
restructuring
multidrug
efflux
transporters,
drug-metabolizing
enzymes,
anticancer
targets.
Furthermore,
variation
resulted
DNA
damage
repair,
downstream
adaptive
response
(apoptosis,
autophagy,
oncogenic
bypass
signaling),
cell
stemness,
tumor
immune
microenvironment,
exosomal
non-coding
RNA.
It
is
highlighted
that
small
molecules
targeting
regulators
have
shown
significant
potential
for
overcoming
different
categories.
Further
inhibitors
activators
A-modified
expected
provide
novel
drugs,
delivering
therapeutic
addressing
challenge
clinical
Clinical and Translational Medicine,
Journal Year:
2022,
Volume and Issue:
12(3)
Published: March 1, 2022
Abstract
Background
The
intervertebral
disc
(IVD)
degeneration
is
the
leading
cause
of
low
back
pain,
which
accounts
for
a
main
disability.
N
6‐methyladenosine
(m6A)
most
abundant
internal
modification
in
eukaryotic
messenger
RNAs
and
involved
various
diseases
cellular
processes
by
modulating
mRNA
fate.
However,
critical
role
m6A
regulation
IVD
remains
unclear.
Nucleus
pulposus
cell
(NPC)
senescence
progression
degeneration.
Here,
we
uncovered
explored
regulatory
mechanism
NPC
during
Methods
Identification
was
based
on
analysis
tissue
samples
model.
ALKBH5
upregulation
inducing
confirmed
functional
experiments
vivo
vitro.
ChIP‐qPCR
DNA‐Pulldown
were
used
to
reveal
increased
regulated
KDM4A‐mediated
H3K9me3.
Furthermore,
Me‐RIP‐seq
performed
identify
hypomethylation
DNMT3B
transcripts
senescent
NPCs.
Stability
showed
that
expression
enhanced
less
YTHDF2
recognition
promoted
via
E4F1
methylation
vitro
analyses.
Results
Expression
senescence,
due
decreased
H3K9me3
modification.
Functionally,
causes
demethylating
turn
promoting
its
following
degradation
transcript
vivo.
Increased
promotes
development
mechanistically
methylating
CpG
islands
at
promoter
region
thus
restraining
transcription
expression.
Conclusions
Collectively,
our
findings
an
epigenetic
interplay
degeneration,
presenting
pro‐senescence
hypomethylation,
highlighting
therapeutic
potential
targeting
m6A/DNMT3B/E4F1
axis
treating
Frontiers in Immunology,
Journal Year:
2023,
Volume and Issue:
14
Published: March 7, 2023
Recent
studies
have
demonstrated
that
N6-methyladenosine
(m6A),
the
most
abundant,
dynamic,
and
reversible
epigenetic
RNA
modification
in
eukaryotes,
is
regulated
by
a
series
of
enzymes,
including
methyltransferases
(writers),
demethylases
(erasers),
m6A
recognition
proteins
(readers).
Aberrant
regulation
pivotal
for
tumorigenesis,
progression,
invasion,
metastasis,
apoptosis
malignant
tumors.
Immune
checkpoint
inhibitors
(ICIs)
has
revolutionized
cancer
treatment,
as
recognized
2018
Nobel
Prize
Medicine
Physiology.
However,
not
all
patients
response
to
ICI
therapy,
which
thought
be
result
intricate
immune
escape
mechanisms.
Recently,
numerous
suggested
novel
role
tumor
evasion.
Herein,
we
review
relevant
mechanisms
regulators
regulating
various
key
signaling
pathways
biology
how
modifications
regulate
expression
checkpoints,
opening
new
window
understand
roles
In
addition,
highlight
prospects
development
directions
future
combined
immunotherapy
strategies
based
on
targeting,
providing
promoting
treatment
outcomes
inhibitors.
Experimental Hematology and Oncology,
Journal Year:
2023,
Volume and Issue:
12(1)
Published: July 6, 2023
Abstract
Tumor
initiation,
progression,
and
response
to
therapies
depend
a
great
extent
on
interactions
between
malignant
cells
the
tumor
microenvironment
(TME),
which
denotes
cancerous/non-cancerous
cells,
cytokines,
chemokines,
various
other
factors
around
tumors.
Cancer
as
well
stroma
can
not
only
obtain
adaption
TME
but
also
sculpt
their
through
series
of
signaling
pathways.
The
post-translational
modification
(PTM)
eukaryotic
by
small
ubiquitin-related
modifier
(SUMO)
proteins
is
now
recognized
key
flexible
pathway.
Proteins
involved
in
tumorigenesis
guiding
several
biological
processes
including
chromatin
organization,
DNA
repair,
transcription,
protein
trafficking,
signal
conduction
rely
SUMOylation.
purpose
this
review
explore
role
that
SUMOylation
plays
formation
reprogramming,
emphasize
importance
targeting
intervene
discuss
potential
inhibitors
(SUMOi)
ameliorating
prognosis.