Blood Screening of Femtomole Level Multiple Alzheimer’s Disease Biomarkers by Metal Isotopic DNA Walkers DOI
Yu Wang, Jing Zhou, Xue Chen

et al.

Analytical Chemistry, Journal Year: 2024, Volume and Issue: 96(49), P. 19847 - 19854

Published: Nov. 28, 2024

Aging is a critical global issue that contributes to the high incidence of Alzheimer's disease (AD). Blood screening emerges as most promising measure for early diagnosis and intervention AD due its noninvasive low cost. However, practical application blood confronts two significant challenges. First, blood-brain barrier, concentration biomarkers in much lower than cerebrospinal fluid. Second, simultaneous quantitative analysis multiple necessary specificity individual biomarkers. Herein, we propose DNAzyme-based 3D DNA walkers sensitive multiplex detection five AD-associated miRNA biomarkers: hsa-miR-125b, hsa-miR-342-3p, hsa-miR-29b, hsa-miR-191-5p, hsa-miR-7d-5. The provide highly efficient autonomous amplification minimal biomarkers' quantities. walking-released metal isotopes

Language: Английский

DNA tetrahedron-based CRISPR bioassay for treble-self-amplified and multiplex HPV-DNA detection with elemental tagging DOI
Xiaohui Zhan, Juan Zhou, Yujia Jiang

et al.

Biosensors and Bioelectronics, Journal Year: 2023, Volume and Issue: 229, P. 115229 - 115229

Published: March 15, 2023

Language: Английский

Citations

28

Single Particle Analysis-Enhanced DNA Walking Machine for Sensitive miRNA Detection DOI

Yanxue Wei,

Yueli Hu,

Chengchao Zhang

et al.

Analytical Chemistry, Journal Year: 2024, Volume and Issue: 96(28), P. 11566 - 11571

Published: June 28, 2024

DNA walking machines have achieved significant breakthroughs in areas such as biosensing, bioimaging, and early cancer diagnosis, facilitated by the self-assembly of or its combination with other materials, magnetic beads metal nanoparticles. However, current machine strategies are constantly challenged inadequate analytical sensitivity, while sophisticated signal amplification procedures often indispensable. Single-particle inductively coupled plasma mass spectrometry (SP-ICPMS) provides superior sensitivity can effectively discriminate between background noise detected signals due to large number atoms a nanoparticle concentrating effect single detection. In this study, we present novel approach utilizing counting duplex-specific nuclease (DSN)-assisted construct 3D for detecting aggressive prostate (PCa) biomarker miRNA-200c. The proposed strategy showed an improvement detection limit (LOD) 0.93 pM (28 amol) was successfully applied human serum samples. To best our knowledge, is first report study.

Language: Английский

Citations

6

Multiregion Linear DNA Walker-Mediated Ultrasensitive Electrochemical Biosensor for miRNA Detection DOI

Tong-lin Hou,

Liang Zhu, Xiaolong Zhang

et al.

Analytical Chemistry, Journal Year: 2022, Volume and Issue: 94(29), P. 10524 - 10530

Published: July 13, 2022

In this work, an intelligent multiregion linear DNA walker (MLDW) with a high walking rate and amplification efficiency was explored for ultrasensitive detection of miRNA. Significantly, amounts functional domain could be concentrated in long obtained by the target miRNA-mediated rolling-circle to simultaneously increase local concentration collision probability, resulting obviously improved reaction rate. Impressively, MLDW can accomplish within 30 min, which is at least 4 times beyond that traditional single-leg multiple-leg walkers. As proof concept, high-efficiency used develop electrochemical biosensing platform miRNA-21 low limit down 36 aM. Therefore, we designed puts forward innovative insight construct nanodevice promote investigation inherent performance nucleic acid signal ultimate application biomolecules clinical disease diagnosis.

Language: Английский

Citations

27

Simple Amplifier Coupled with a Lanthanide Labeling Strategy for Multiplexed and Specific Quantification of MicroRNAs DOI
Qi Kang, Beibei Chen, Man He

et al.

Analytical Chemistry, Journal Year: 2022, Volume and Issue: 94(37), P. 12934 - 12941

Published: Sept. 7, 2022

Inductively coupled plasma–mass spectrometry (ICP–MS) with elemental labeling is a promising strategy for multiplex microRNA (miRNA) analysis. However, it still challenging specific analysis of multiple miRNAs high homology, and the development assays always limited by complexity sequence design. Herein, simple direct ICP–MS-based assay was developed simultaneous detection three combining lanthanide entropy-driven catalytic (EDC) amplification. Owing to specificity EDC nucleic acid recognition, able differentiate single-base mutation in each circuit. A universal biotin-labeled DNA strand designed hybridize substrates circuits, targeting miRNA-21, miRNA-155, miRNA-10b, respectively. All were loaded on surface streptavidin magnetic beads. In presence target miRNA, reaction initiated, dissociated, continuously releasing reporter strands that labeled lanthanides (Tb/Ho/Lu). After separation, supernatant containing released introduced into an ICP–MS system 159Tb/165Ho/175Lu quantification The limits 7.4, 7.5, 11 pmol L–1 Overall, this study provides powerful miRNAs, advantages flexible probe design, good sensitivity, excellent specificity.

Language: Английский

Citations

25

Mass Spectrometric Multiplex Detection of MicroRNA and Protein Biomarkers for Liver Cancer DOI
Yan Li, Zili Huang, Ziyan Li

et al.

Analytical Chemistry, Journal Year: 2022, Volume and Issue: 94(49), P. 17248 - 17254

Published: Nov. 30, 2022

The occurrence of cancers is often accompanied by the abnormal expression several sorts biomarkers (e.g., nucleic acids and proteins). multiplex assessment them would substantially aid in early detection precise diagnosis, which hampered their different schemes, reaction matrix reagents, spectral overlapping. Herein, we propose a simple sensitive mass spectrometric method for acid protein, liver cancer-related miRNA 223 alpha-fetoprotein (AFP) were selected as model analytes. self-amplification effect metal atom-based nanoparticle probes can provide high sensitivity complex serum samples without any additional amplification procedure. limits simultaneous AFP 103 (2.1 pM) 219 amol (0.15 ng/mL), respectively, with specificity selectivity. proposed potentially useful rapid screening cancers.

Language: Английский

Citations

25

Hairpin DNAs conformational changes inducing opposite-polarity photoelectric signals recovery for simultaneous monitoring of dual microRNAs DOI

Ye Cao,

Guoshuai Sun,

Defu Qian

et al.

Sensors and Actuators B Chemical, Journal Year: 2023, Volume and Issue: 382, P. 133565 - 133565

Published: Feb. 23, 2023

Language: Английский

Citations

15

Mass Nanotags Mediate Parallel Amplifications on Nanointerfaces for Multiplexed Profiling of RNAs DOI
Zhenzhen Zhang, Hongmei Xu,

Yinyin Fan

et al.

Nano Letters, Journal Year: 2023, Volume and Issue: 23(5), P. 1820 - 1829

Published: Feb. 15, 2023

Multiplexed profiling of RNAs aids in a comprehensive understanding multiparameter-defined cellular processes and pathological states. We herein present mass nanotags-enabled interfacial assembly system (MNTs-AS) with parallel amplification motors for simultaneous assaying multiple biosystems by matrix-assisted laser desorption/ionization spectrometry (MALDI MS). Four kinds MNTs encoding corresponding RNA can be cyclically assembled on magnetic beads target-triggered catalytic hairpin (CHA) machineries nanointerfaces, generating multiplexed amplified characteristic ion signals assigned to target upon MALDI MS interrogation. By virtue high sensitivity multiplexing capability, the MNTs-AS-based assay allows precision subtyping diverse breast cancer cells their exosomes miRNA-21, miRNA-373, miRNA-155, manganese superoxide dismutase mRNA via single inquiry. This method provides promising tool unraveling RNA-involved biological events fundamental research distinguishing different subtypes clinical practice.

Language: Английский

Citations

14

Isotope Dilution DNA Logic Circuits for Multiple Output and Absolute Quantification DOI
Yanbei Zhu, Chao Wei, Ziyan Li

et al.

Analytical Chemistry, Journal Year: 2025, Volume and Issue: unknown

Published: March 6, 2025

DNA logic circuits have gained great success in the past, thanks to their distinct performance regarding scalability and correctness of computation. However, there are still two challenges often considered for circuit-based First, mainstream optical probes subject spectral overlapping interference complex multitask analysis outputs. Second, absolute quantification results traceable primary international system units mission impossible, especially interlaboratory comparisons quality assurances. Herein, we constructed encoded with lanthanide isotopes decoded by elemental mass spectrometry. The 155Gd-enriched isotope 145Nd-enriched were incorporated dilution-based microRNAs. proposed isotopic greatly enhance multiplexity computation accuracy, which poses a potential cancer biomarker-related diagnosis.

Language: Английский

Citations

0

Nanomolecular machines: Pioneering precision medicine for neoplastic diseases through advanced diagnosis and treatment DOI

Ruming Li,

Jialu Qian,

Xiao Zhu

et al.

Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease, Journal Year: 2024, Volume and Issue: 1870(8), P. 167486 - 167486

Published: Aug. 30, 2024

Language: Английский

Citations

3

CRISPR-associated “genetic scissors” for multiplexing analysis DOI
Chengchao Zhang, Zili Huang, Ziyan Li

et al.

TrAC Trends in Analytical Chemistry, Journal Year: 2023, Volume and Issue: 170, P. 117431 - 117431

Published: Nov. 17, 2023

Language: Английский

Citations

8