Toward Microbial Recycling and Upcycling of Plastics: Prospects and Challenges DOI Creative Commons
Jo-Anne Verschoor, Hadiastri Kusumawardhani, Arthur F. J. Ram

et al.

Frontiers in Microbiology, Journal Year: 2022, Volume and Issue: 13

Published: March 23, 2022

Annually, 400 Mt of plastics are produced which roughly 40% is discarded within a year. Current plastic waste management approaches focus on applying physical, thermal, and chemical treatments polymers. However, these methods have severe limitations leading to the loss valuable materials resources. Another major drawback rapid accumulation into environment causing one biggest environmental threats twenty-first century. Therefore, complement current novel routes toward degradation upcycling need be developed. Enzymatic conversion present promising approach sustainable recycling building blocks. quest for enzymes that efficiently operate in cost-effective, large-scale poses many challenges. To date, wide range experimental set-ups has been reported, cases lacking detailed investigation microbial species exhibiting degrading properties as well their corresponding enzymes. The apparent lack consistent compromises necessary discovery In this review, we discuss prospects possibilities efficient enzymatic degradation, recycling, plastics, correlation with diversity broad utilization. identification optimization compared discussed. We framework standardized workflow, allowing transparent future.

Language: Английский

Late-stage C–H functionalization offers new opportunities in drug discovery DOI
Lucas Guillemard, Nikolaos Kaplaneris, Lutz Ackermann

et al.

Nature Reviews Chemistry, Journal Year: 2021, Volume and Issue: 5(8), P. 522 - 545

Published: July 13, 2021

Language: Английский

Citations

588

Metabolic and Pharmaceutical Aspects of Fluorinated Compounds DOI
Benjamin M. Johnson,

Yue‐Zhong Shu,

Xiaoliang Zhuo

et al.

Journal of Medicinal Chemistry, Journal Year: 2020, Volume and Issue: 63(12), P. 6315 - 6386

Published: March 17, 2020

The applications of fluorine in drug design continue to expand, facilitated by an improved understanding its effects on physicochemical properties and the development synthetic methodologies that are providing access new fluorinated motifs. In turn, studies molecules deeper insights into metabolic pathways, distribution, disposition. Despite high strength C–F bond, departure fluoride from intermediates can be facile. This reactivity has been leveraged mechanism-based enzyme inhibitors influenced fate compounds. this Perspective, we summarize literature associated with metabolism molecules, focusing examples where presence influences profile. These have revealed potentially problematic outcomes some motifs enhancing our how should deployed.

Language: Английский

Citations

509

Mechanisms of Cytochrome P450-Catalyzed Oxidations DOI
F. Peter Guengerich

ACS Catalysis, Journal Year: 2018, Volume and Issue: 8(12), P. 10964 - 10976

Published: Oct. 18, 2018

Enzymes are complex biological catalysts and critical to life. Most oxidations of chemicals catalyzed by cytochrome P450 (P450, CYP) enzymes, which generally utilize mixed-function oxidase stoichiometry, utilizing pyridine nucleotides as electron donors: NAD(P)H + O2 R → NAD(P)+ RO H2O (where is a carbon substrate an oxidized product). The catalysis largely understood in the context heme iron-oxygen referred Compound I, formally FeO3+, whose basis was peroxidase chemistry. Many X-ray crystal structures P450s now available (≥ 822 from ≥146 different P450s) have helped understanding catalytic specificity. In addition hydroxylations, catalyze more oxidations, including C-C bond formation cleavage. derived directed evolution can even unusual reactions, e.g. cyclopropanation. Current questions under investigation include potential role intermediate 0 (formally FeIII-O2-) some roles high- low-spin forms mechanism desaturation, open closed catalysis, extent processivity multi-step accessory protein b5. More global exactly how structure drives function, prediction multiple conformations.

Language: Английский

Citations

337

Human steroid biosynthesis, metabolism and excretion are differentially reflected by serum and urine steroid metabolomes: A comprehensive review DOI Creative Commons
Lina Schiffer, Lise Barnard, Elizabeth S. Baranowski

et al.

The Journal of Steroid Biochemistry and Molecular Biology, Journal Year: 2019, Volume and Issue: 194, P. 105439 - 105439

Published: July 27, 2019

Advances in technology have allowed for the sensitive, specific, and simultaneous quantitative profiling of steroid precursors, bioactive steroids inactive metabolites, facilitating comprehensive characterization serum urine metabolomes. The quantification panels is therefore gaining favor over single marker metabolites clinical research laboratories. However, although biochemical pathways biosynthesis metabolism hormones are now well defined, a gulf still exists between this knowledge its application to measured profiles. In review, we present an overview hormone by liver peripheral tissues, specifically highlighting linking differentiating A brief methodology used also provided.

Language: Английский

Citations

327

Power of Biocatalysis for Organic Synthesis DOI Creative Commons
Christoph K. Winkler, Joerg H. Schrittwieser, Wolfgang Kroutil

et al.

ACS Central Science, Journal Year: 2021, Volume and Issue: 7(1), P. 55 - 71

Published: Jan. 14, 2021

Biocatalysis, using defined enzymes for organic transformations, has become a common tool in synthesis, which is also frequently applied industry. The generally high activity and outstanding stereo-, regio-, chemoselectivity observed many biotransformations are the result of precise control reaction active site biocatalyst. This achieved by exact positioning reagents relative to each other fine-tuned 3D environment, specific activating interactions between protein, subtle movements catalyst. Enzyme engineering enables one adapt catalyst desired process. A well-filled biocatalytic toolbox ready be used various reactions. Providing nonnatural conditions evolving biocatalysts play with myriad options creating novel transformations thereby opening new, short pathways target molecules. Combining several pot perform reactions concurrently increases efficiency biocatalysis even further.

Language: Английский

Citations

290

Heme: emergent roles of heme in signal transduction, functional regulation and as catalytic centres DOI
Tôru Shimizu, Alžběta Lengálová, Václav Martínek

et al.

Chemical Society Reviews, Journal Year: 2019, Volume and Issue: 48(24), P. 5624 - 5657

Published: Jan. 1, 2019

Protoporphyrin IX iron complex (heme) is an important cofactor for oxygen transfer, storage, activation, and electron transfer when bound to the heme proteins hemoglobin, myoglobin, cytochrome P450 c, respectively. In addition these prototypical proteins, there are emergent, critical roles of exchangeable/labile in signal transduction. Specifically, it has been shown that association/dissociation to/from heme-responsive sensors regulates numerous functions, including transcription, DNA binding, microRNA splicing, translation, protein kinase activity, degradation, K+ channel function, two-component transduction, many other functions. this review, we provide a comprehensive overview structure-function relationships describe new, additional as functional inhibitors activators. order complete description various heme-bound also mention novel chemical reaction centre aldoxime dehydratase, cis-trans isomerase, N-N bond formation, hydrazine formation S-S These unprecedented functions should be interest biological chemists. Insight into underlying molecular mechanisms essential understanding new role physiological pathological processes.

Language: Английский

Citations

181

Gene Editing and Systems Biology Tools for Pesticide Bioremediation: A Review DOI Creative Commons
Shweta Jaiswal, Dileep Kumar Singh, Pratyoosh Shukla

et al.

Frontiers in Microbiology, Journal Year: 2019, Volume and Issue: 10

Published: Feb. 13, 2019

Bioremediation is the degradation potential of microorganisms to dissimilate complex chemical compounds from surrounding environment. The genetics and biochemistry biodegradation processes in datasets opened way systems biology. Systemic biology aid study interacting parts involved system. significant keys system are network, computational biology, omics approaches. Biodegradation network consists all databases which assisting deterioration for bioremediation processes. This review deciphers bio-degradation i.e., (UM-BBD, PAN, PTID etc.) aiding processes, multi approaches like metagenomics, genomics, transcriptomics, proteomics metabolomics efficient functional gene mining their validation experiments. Besides, present also describes editing tools CRISPR Cas, TALEN ZFNs can possibly make design microbe with interest particular recalcitrant improved bioremediation.

Language: Английский

Citations

169

Molecular oxygen-mediated oxygenation reactions involving radicals DOI
Conghui Tang, Xu Qiu, Zengrui Cheng

et al.

Chemical Society Reviews, Journal Year: 2021, Volume and Issue: 50(14), P. 8067 - 8101

Published: Jan. 1, 2021

Molecular oxygen as a green, inexpensive oxidant and source has displayed lots of advantages compared to other oxidants. This review introduces the recent advances radical processes in molecular oxygen-mediated oxygenation reactions.

Language: Английский

Citations

166

Iron- and cobalt-catalyzed C(sp3)–H bond functionalization reactions and their application in organic synthesis DOI
Yungen Liu,

Tingjie You,

Hai‐Xu Wang

et al.

Chemical Society Reviews, Journal Year: 2020, Volume and Issue: 49(15), P. 5310 - 5358

Published: Jan. 1, 2020

This review highlights the developments in iron and cobalt catalyzed C(sp3)–H bond functionalization reactions with emphasis on their applications organic synthesis, i.e. natural products pharmaceuticals synthesis and/or modification.

Language: Английский

Citations

162

A comprehensive review on the potential of microbial enzymes in multipollutant bioremediation: Mechanisms, challenges, and future prospects DOI
Mathiyazhagan Narayanan, Sameh S. Ali, Mostafa M. El‐Sheekh

et al.

Journal of Environmental Management, Journal Year: 2023, Volume and Issue: 334, P. 117532 - 117532

Published: Feb. 20, 2023

Language: Английский

Citations

142