Advances in Clustered, Regularly Interspaced Short Palindromic Repeats (CRISPR)-Based Diagnostic Assays Assisted by Micro/Nanotechnologies DOI

Huahua Yue,

Mengqi Huang, Tian Tian

et al.

ACS Nano, Journal Year: 2021, Volume and Issue: 15(5), P. 7848 - 7859

Published: May 7, 2021

Clustered, regularly interspaced short palindromic repeats (CRISPR)-based diagnoses, derived from gene-editing technology, have been exploited for less than 5 years and are now reaching the stage of precommercial use. CRISPR tools some notable features, such as recognition at physiological temperature, excellent specificity, high-efficiency signal amplification capabilities. These characteristics promising development next-generation diagnostic technologies. In this Perspective, we present a detailed summary which micro/nanotechnologies play roles in advancement diagnosis how they involved. The use nanoprobes, nanochips, nanodevices, microfluidic lateral flow strips, etc. detection systems has led to new opportunities CRISPR-based assay development, achieving equipment-free detection, providing more compact systems, improving sensitivity quantitative Although tremendous progress made, not yet reached its full potential. We discuss upcoming improvements will continue key roles.

Language: Английский

A CRISPR/Cas12a-empowered surface plasmon resonance platform for rapid and specific diagnosis of the Omicron variant of SARS-CoV-2 DOI Creative Commons
Zhi Chen, Jingfeng Li, Tianzhong Li

et al.

National Science Review, Journal Year: 2022, Volume and Issue: 9(8)

Published: June 3, 2022

The outbreak of the COVID-19 pandemic was partially due to challenge identifying asymptomatic and presymptomatic carriers virus, thus highlights a strong motivation for diagnostics with high sensitivity that can be rapidly deployed. On other hand, several concerning SARS-CoV-2 variants, including Omicron, are required identified as soon samples 'positive'. Unfortunately, traditional PCR test does not allow their specific identification. Herein, first time, we have developed MOPCS (Methodologies Photonic CRISPR Sensing), which combines an optical sensing technology-surface plasmon resonance (SPR) 'gene scissors' clustered regularly interspaced short palindromic repeat (CRISPR) technique achieve both specificity when it comes measurement viral variants. is low-cost, CRISPR/Cas12a-system-empowered SPR gene-detecting platform analyze RNA, without need amplification, within 38 min from sample input results output, limit detection 15 fM. achieves highly sensitive analysis SARS-CoV-2, mutations appear in variants B.1.617.2 (Delta), B.1.1.529 (Omicron) BA.1 (a subtype Omicron). This also used some recently collected patient local China, by Centers Disease Control Prevention. innovative CRISPR-empowered will further contribute fast, accurate target nucleic acid sequences single-base mutations.

Language: Английский

Citations

297

Visible-light and near-infrared fluorescence and surface-enhanced Raman scattering point-of-care sensing and bio-imaging: a review DOI
Yingjie Hang,

Jennifer Boryczka,

Nianqiang Wu

et al.

Chemical Society Reviews, Journal Year: 2021, Volume and Issue: 51(1), P. 329 - 375

Published: Dec. 13, 2021

This review article deals with the concepts, principles and applications of visible-light near-infrared (NIR) fluorescence surface-enhanced Raman scattering (SERS) in vitro point-of-care testing (POCT) vivo bio-imaging. It has discussed how to utilize biological transparency windows improve penetration depth signal-to-noise ratio, use surface plasmon resonance (SPR) amplify SERS signals. highlighted some plasmonic probes. also reviewed design strategies fluorescent sensors detection metal ions, small molecules, proteins nucleic acids. Particularly, it provided perspectives on integration into microfluidic chips as lab-on-chips realize testing. active devices non-paper- or paper-based lateral flow assays for diagnostics. In addition, this NIR bio-imaging platforms monitoring physiological processes disease progression live cells tissues. Moreover, POCT toxins, heavy metals, illicit drugs, cancers, traumatic brain injuries, infectious diseases such COVID-19, influenza, HIV sepsis.

Language: Английский

Citations

201

Amplification-free CRISPR/Cas detection technology: challenges, strategies, and perspectives DOI
Huimin Li, Yi Xie, Fumin Chen

et al.

Chemical Society Reviews, Journal Year: 2022, Volume and Issue: 52(1), P. 361 - 382

Published: Dec. 19, 2022

This review summarizes the recent advances and main strategies to improve sensitivity of amplification-free CRISPR/Cas-based detection techniques.

Language: Английский

Citations

156

Detection of SARS-CoV-2 by CRISPR/Cas12a-Enhanced Colorimetry DOI

Yongzhong Jiang,

Menglu Hu,

An-An Liu

et al.

ACS Sensors, Journal Year: 2021, Volume and Issue: 6(3), P. 1086 - 1093

Published: March 8, 2021

The outbreak of COVID-19 caused a worldwide public health crisis. Large-scale population screening is an effective means to control the spread COVID-19. Reverse transcription–polymerase chain reaction (RT-qPCR) and serology assays are most available techniques for SARS-CoV-2 detection; however, they suffer from either less sensitivity accuracy or low instrument accessibility screening. To balance sensitivity, specificity, test availability, here, we developed enhanced colorimetry, which termed as magnetic pull-down-assisted colorimetric method based on CRISPR/Cas12a system (M-CDC), detection. By this method, RNA synthetic sequences cultured viruses can be detected by naked eye gold nanoparticle (AuNP) probes, with detection limit 50 copies per reaction. With CRISPR/Cas12a-assisted detection, specifically distinguished other closely related viruses. M-CDC was further used analyze 41 clinical samples, whose performance 95.12%, consistent that approved Clinical RT-qPCR Diagnosis kit. not dependent sophisticated instruments, makes it potentially valuable applied under poor conditions.

Language: Английский

Citations

153

Materials with Tunable Optical Properties for Wearable Epidermal Sensing in Health Monitoring DOI
Fei Han, Tiansong Wang, Guozhen Liu

et al.

Advanced Materials, Journal Year: 2022, Volume and Issue: 34(26)

Published: March 8, 2022

Advances in wearable epidermal sensors have revolutionized the way that physiological signals are captured and measured for health monitoring. One major challenge is to convert easily readable a convenient way. possibility based on visible readouts. There range of materials whose optical properties can be tuned by parameters such as temperature, pH, light, electric fields. Herein, this review covers highlights set with tunable their integration into Specifically, recent progress, fabrication, applications these summarized discussed. Finally, challenges perspectives next generation devices proposed.

Language: Английский

Citations

152

CRISPR-Cas systems for diagnosing infectious diseases DOI Open Access
Anastasiya Kostyusheva, Sergey Brezgin, Yu.Yu. Babin

et al.

Methods, Journal Year: 2021, Volume and Issue: 203, P. 431 - 446

Published: April 9, 2021

Language: Английский

Citations

120

Clustered Regularly Interspaced Short Palindromic Repeats-Mediated Amplification-Free Detection of Viral DNAs Using Surface-Enhanced Raman Spectroscopy-Active Nanoarray DOI
Jin‐Ha Choi, Minkyu Shin, Letao Yang

et al.

ACS Nano, Journal Year: 2021, Volume and Issue: 15(8), P. 13475 - 13485

Published: Aug. 9, 2021

Nucleic acid biomarkers have been widely used to detect various viral-associated diseases, including the recent pandemic COVID-19. The CRISPR-Cas-based trans-activating phenomenon has shown excellent potential for developing sensitive and selective detection of nucleic acids. However, amplification steps are typically required when monitoring target is needed. To overcome aforementioned challenges, we developed a CRISPR-Cas12a-based amplification-free biosensor by surface-enhanced Raman spectroscopy (SERS)-assisted ultrasensitive system. We integrated activated CRISPR-Cas12a viral DNA with Raman-sensitive system composed ssDNA-immobilized probe-functionalized Au nanoparticles (RAuNPs) on graphene oxide (GO)/triangle nanoflower array. Using this CRISPR-based improved sensitivity multiviral DNAs such as hepatitis B virus (HBV), human papillomavirus 16 (HPV-16), HPV-18 an extremely low limit vast range from 1 aM 100 pM without steps. suggest that acids can be applied precise early diagnosis infections, cancers, several genetic diseases.

Language: Английский

Citations

116

CRISPR/Cas12a-mediated liposome-amplified strategy for the photoelectrochemical detection of nucleic acid DOI

Hexiang Gong,

Yulin Wu,

Ruijin Zeng

et al.

Chemical Communications, Journal Year: 2021, Volume and Issue: 57(71), P. 8977 - 8980

Published: Jan. 1, 2021

This study reports a photoelectrochemical biosensor for dopamine-loaded liposome-encoded magnetic beads cleaved by CRISPR/Cas 12a system the quantification of human papilloma virus-related DNA using neodymium-doped BiOBr nanosheets.

Language: Английский

Citations

114

CRISPR-cas12a mediated SERS lateral flow assay for amplification-free detection of double-stranded DNA and single-base mutation DOI
Yuanfeng Pang, Qing Li, Chongwen Wang

et al.

Chemical Engineering Journal, Journal Year: 2021, Volume and Issue: 429, P. 132109 - 132109

Published: Aug. 31, 2021

Language: Английский

Citations

110

CRISPR/Cas-powered nanobiosensors for diagnostics DOI
Quynh Anh Phan, Linh B. Truong, David Medina-Cruz

et al.

Biosensors and Bioelectronics, Journal Year: 2021, Volume and Issue: 197, P. 113732 - 113732

Published: Oct. 29, 2021

Language: Английский

Citations

107