bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: May 24, 2023
ABSTRACT
Based
on
studies
with
a
fluorescent
reporter
dye,
Mito
Thermo
Yellow,
and
the
genetically
encoded
gTEMP
ratiometric
temperature
indicator
targeted
to
mitochondria,
of
active
mitochondria
in
four
mammalian
one
insect
cell-line
was
estimated
be
up
15
°C
above
that
external
environment
which
cells
were
exposed.
High
mitochondrial
maintained
face
variety
metabolic
stresses,
including
substrate
starvation
or
modification,
decreased
ATP
demand
due
inhibition
cytosolic
protein
synthesis,
adenine
nucleotide
transporter
and,
if
an
auxiliary
pathway
for
electron
transfer
available
via
alternative
oxidase,
even
respiratory
poisons
acting
downstream
OXPHOS
complex
I.
We
propose
high
is
inescapable
consequence
biochemistry
oxidative
phosphorylation
homeostatically
as
primary
feature
metabolism.
IMPACT
STATEMENT
Mitochondria
are
hotter
than
their
living
cells.
In
response
diverse
re-adjusts
this
value
whenever
possible.
Based
on
studies
with
a
fluorescent
reporter
dye,
Mito
Thermo
Yellow
(MTY),
and
the
genetically
encoded
gTEMP
ratiometric
temperature
indicator
targeted
to
mitochondria,
of
active
mitochondria
in
four
mammalian
one
insect
cell
line
was
estimated
be
up
15°C
above
that
external
environment
which
cells
were
exposed.
High
mitochondrial
maintained
face
variety
metabolic
stresses,
including
substrate
starvation
or
modification,
decreased
ATP
demand
due
inhibition
cytosolic
protein
synthesis,
adenine
nucleotide
transporter
and,
if
an
auxiliary
pathway
for
electron
transfer
available
via
alternative
oxidase,
even
respiratory
poisons
acting
downstream
oxidative
phosphorylation
(OXPHOS)
complex
I.
We
propose
high
is
inescapable
consequence
biochemistry
OXPHOS
homeostatically
as
primary
feature
metabolism.
Communications Biology,
Journal Year:
2024,
Volume and Issue:
7(1)
Published: Nov. 6, 2024
A
spatiotemporal
understanding
of
gene
function
requires
the
precise
control
expression
in
each
cell.
Here,
we
use
an
infrared
laser–evoked
operator
(IR-LEGO)
system
to
induce
at
single-cell
level
moss
Physcomitrium
patens
by
heating
a
living
cell
with
IR
laser
and
thereby
activating
heat
shock
response.
We
identify
irradiation
conditions
that
provide
higher
inducibility
lower
invasiveness
changing
power
duration.
Furthermore,
quantitatively
characterize
induction
profile
response
using
heat-induced
fluorescence
reporter
after
single
cells
under
different
conditions.
Our
data
indicate
long
duration
leads
according
increase
but
not
vice
versa,
even
without
conferring
apparent
damage
decelerates
and/or
delayed
induction.
define
temporal
shift
as
onset
This
study
contributes
versatile
application
IR-LEGO
plants
improves
our
shock-induced
expression.
optimizes
effectively
inducing
characterizes
through
quantitative
imaging
analysis
patens.
Biosensors,
Journal Year:
2023,
Volume and Issue:
13(3), P. 338 - 338
Published: March 3, 2023
Accurate
temperature
control
within
biological
and
chemical
reaction
samples
instrument
calibration
are
essential
to
the
diagnostic,
pharmaceutical
industries.
This
is
particularly
challenging
for
microlitre-scale
reactions
typically
used
in
real-time
PCR
applications
differential
scanning
fluorometry.
Here,
we
describe
development
of
a
simple,
inexpensive
ratiometric
dual
fluorescent
protein
biosensor
(DFPTB).
A
combination
cycle
three
green
monomeric
red
enabled
quantification
relative
changes
identification
discrepancies
across
wide
range
4-70
°C.
The
maximal
sensitivity
6.7%
°C-1
precision
0.1
°C
were
achieved
biologically
relevant
25-42
standard
phosphate-buffered
saline
conditions
at
pH
7.2.
Good
was
variety
buffers
ranging
from
4.8
9.1.
DFPTB
can
be
either
purified
or
mixed
bacteria-encapsulated
formats,
paving
way
vitro
vivo
topologically
precise
measurements.
Advanced Materials,
Journal Year:
2023,
Volume and Issue:
35(52)
Published: Oct. 3, 2023
Abstract
Luminescence
lifetime‐based
sensing
is
ideally
suited
to
monitor
biological
systems
due
its
minimal
invasiveness
and
remote
working
principle.
Yet,
applicability
limited
in
conditions
of
low
signal‐to‐noise
ratio
(SNR)
induced
by,
e.g.,
short
exposure
times
presence
opaque
tissues.
Herein
this
limitation
overcome
by
applying
a
U‐shaped
convolutional
neural
network
(U‐NET)
improve
luminescence
lifetime
estimation
under
extremely
SNR.
Specifically,
the
prowess
U‐NET
showcased
context
thermometry,
achieving
more
precise
thermal
readouts
using
Ag
2
S
nanothermometers.
Compared
traditional
analysis
methods
decay
curve
fitting
integration,
can
extract
average
lifetimes
precisely
consistently
regardless
SNR
value.
The
improvement
achieved
performance
demonstrated
with
two
experiments
characterized
extreme
measurement
conditions:
monitoring
free‐falling
droplets,
transients
suspended
droplets
through
an
medium.
These
results
broaden
fields
including
vivo
experimentation
microfluidics,
while,
hopefully,
spurring
further
research
on
implementation
machine
learning
(ML)
sensing.
Biophysics and Physicobiology,
Journal Year:
2022,
Volume and Issue:
19(0), P. n/a - n/a
Published: Jan. 1, 2022
Measuring
physical
quantities
in
the
nanometric
region
inside
single
cells
is
of
great
importance
for
understanding
cellular
activity.
Thus,
development
biocompatible,
sensitive,
and
reliable
nanobiosensors
essential
progress
biological
research.
Diamond
nanoparticles
containing
nitrogen-vacancy
centers
(NVCs),
referred
to
as
fluorescent
nanodiamonds
(FNDs),
have
recently
emerged
sensors
that
show
promise
ultrasensitive
nanosensing
quantities.
FNDs
emit
stable
fluorescence
without
photobleaching.
Additionally,
their
distinctive
magneto-optical
properties
enable
an
optical
readout
quantum
states
electron
spin
NVC
under
ambient
conditions.
These
quantitative
sensing
parameters
(temperature,
magnetic
field,
electric
pH,
etc.)
vicinity
FND;
hence,
are
often
described
"quantum
sensors".
In
this
review,
recent
advancements
biosensing
applications
summarized.
First,
principles
orientation
temperature
using
FND
explained.
Next,
we
introduce
surface
coating
techniques
indispensable
controlling
physicochemical
FNDs.
The
achievements
practical
surface-coated
FNDs,
including
orientation,
temperature,
thermal
conductivity,
then
highlighted.
Finally,
advantages,
challenges,
perspectives
discussed.
This
review
article
extended
version
Japanese
article,
Situ
Measurement
Intracellular
Thermal
Conductivity
Using
Nanoparticle,
published
SEIBUTSU
BUTSURI
Vol.
62,
p.
122-124
(2022).
Abscisic
acid
(ABA)
is
a
conserved
“stress
hormone”
in
unicellular
organisms,
plants
and
animals.
In
mammals,
ABA
its
receptors
LANCL1
LANCL2
stimulate
insulin-independent
cell
glucose
uptake
oxidative
metabolism:
overexpression
of
LANCL1/2
increases,
their
si-lencing
conversely
reduces,
mitochondrial
number,
respiration
proton
gradient
dissipation
muscle
cells
brown
adipocytes.
We
hypothesized
that
the
ABA/LANCL
hor-mone/receptors
system
could
be
involved
thermogenesis.
Heat
production
by
LANCL1/2-overexpressing
vs.
double-silenced
was
compared
rat
H9c2
cardiomyocytes
with
two
different
methods:
differential
temperature
measurements
using
sensitive
thermistor
probes,
isothermal
calorimetry.
Results
indicate
overexpressing
generate
an
approx.
double
amount
thermal
power
cells,
addition
further
doubles
heat
cells.
With
we
find
time-scale
4
min
for
thermogenesis
to
“turn
on”
after
nutrient
addition.
These
results
identify
hormone
as
hitherto
unknown
regu-lator
Pharmacologic
means
increasing
metabolic
energy
are
considered
promising
strategy
reduce
stress
lipid
accumulation
at
cellular
organismic
level:
from
this
study,
LANCL1-2
proteins
emerge
targetable
controllers
ther-mogenesis
through
natural
ligand
ABA.
Photonics,
Journal Year:
2023,
Volume and Issue:
10(7), P. 705 - 705
Published: June 21, 2023
Determination
of
the
iron
oxide
nanoparticles
(IONPs)
local
temperature
during
laser
heating
is
important
in
aspect
phototherapy.
We
have
carried
out
theoretical
modeling
IONPs
electromagnetic
(EM)
field
enhancement
and
under
action
near
individual
ensembles
with
different
sizes,
shapes
chemical
phases.
For
experimental
determination
temperature,
we
used
fluorescence
thermometry
rhodamine
B
(RhB)
based
on
its
lifetime.
Depending
shape
their
location
space,
a
significant
change
spatial
distribution
EM
surface
observed.
The
an
ensemble
reaches
sufficiently
high
values;
relative
about
35
°C
for
Fe2O3
NPs.
Nevertheless,
all
studied
water
colloids
showed
by
no
more
than
10
°C.
depends
thermal
conductivity
medium,
which
heat
dissipation
depends.
During
scanning
cell
culture
incubated
types
IONPs,
increase,
estimated
from
shortening
RhB
lifetime,
100
Such
“hot
spots”
within
lysosomes,
where
predominantly
reside,
lead
to
severe
cellular
stress
can
be
therapy.
The Journal of Physical Chemistry B,
Journal Year:
2023,
Volume and Issue:
127(30), P. 6684 - 6693
Published: July 23, 2023
A
number
of
biochemical
reactions
proceed
inside
biomembranes.
Since
the
rate
a
chemical
reaction
is
influenced
by
properties
surrounding
environment,
it
important
to
examine
environment
Although
energy
transfer
characteristics
are
basic
and
property
medium,
experimental
investigation
thermal
conducting
capabilities
biomembranes
challenging
task.
We
have
examined
lipid
bilayer
membranes
liposomes,
good
model
system
for
biomembrane,
with
picosecond
time-resolved
Raman
spectroscopy.
The
cooling
kinetics
first
excited
singlet
(S1)
state
trans-stilbene
solubilized
within
observed
as
peak
shift
1570
cm–1
band
S1
trans-stilbene.
constant
obtained
in
six
formed
phospholipids
different
hydrocarbon
chains,
DSPC,
DPPC,
DMPC,
DLPC,
DOPC,
egg-PC.
estimate
diffusivity
known
correlation
between
solvent.
estimated
liquid-crystal-phase
8.9
×
10–8
9.4
m2
s–1,
while
that
gel-phase
8.4
8.5
s–1.
difference
two
phases
explained
one-dimensional
diffusion
equation
heat.
Based
on
studies
with
a
fluorescent
reporter
dye,
Mito
Thermo
Yellow,
and
the
genetically
encoded
gTEMP
ratiometric
temperature
indicator
targeted
to
mitochondria,
of
active
mitochondria
in
four
mammalian
one
insect
cell-line
was
estimated
be
up
15
°C
above
that
external
environment
which
cells
were
exposed.
High
mitochondrial
maintained
face
variety
metabolic
stresses,
including
substrate
starvation
or
modification,
decreased
ATP
demand
due
inhibition
cytosolic
protein
synthesis,
adenine
nucleotide
transporter
and,
if
an
auxiliary
pathway
for
electron
transfer
available
via
alternative
oxidase,
even
respiratory
poisons
acting
downstream
complex
I.
We
propose
high
is
inescapable
consequence
biochemistry
oxidative
phosphorylation
homeostatically
as
primary
feature
metabolism.Mitochondria
are
at
least
hotter
than
their
living
cells.
In
response
diverse
re-adjusts
this
value
whenever
possible.
Based
on
studies
with
a
fluorescent
reporter
dye,
Mito
Thermo
Yellow,
and
the
genetically
encoded
gTEMP
ratiometric
temperature
indicator
targeted
to
mitochondria,
of
active
mitochondria
in
four
mammalian
one
insect
cell-line
was
estimated
be
up
15
°C
above
that
external
environment
which
cells
were
exposed.
High
mitochondrial
maintained
face
variety
metabolic
stresses,
including
substrate
starvation
or
modification,
decreased
ATP
demand
due
inhibition
cytosolic
protein
synthesis,
adenine
nucleotide
transporter
and,
if
an
auxiliary
pathway
for
electron
transfer
available
via
alternative
oxidase,
even
respiratory
poisons
acting
downstream
OXPHOS
complex
I.
We
propose
high
is
inescapable
consequence
biochemistry
oxidative
phosphorylation
homeostatically
as
primary
feature
metabolism.Mitochondria
are
hotter
than
their
living
cells.
In
response
diverse
re-adjusts
this
value
whenever
possible.