Microbiome,
Journal Year:
2020,
Volume and Issue:
8(1)
Published: March 3, 2020
Abstract
Background
Plant
health
is
intimately
influenced
by
the
rhizosphere
microbiome,
a
complex
assembly
of
organisms
that
changes
markedly
across
plant
growth.
However,
most
microbiome
research
has
focused
on
fractions
this
particularly
bacteria
and
fungi.
It
remains
unknown
how
other
microbial
components,
especially
key
predators—protists—are
linked
to
health.
Here,
we
investigated
holistic
including
bacteria,
eukaryotes
(fungi
protists),
as
well
functional
metabolism
genes.
We
these
communities
genes
throughout
growth
tomato
plants
either
developed
disease
symptoms
or
remained
healthy
under
field
conditions.
Results
found
pathogen
dynamics
best
predicted
protists.
More
specifically,
microbial-feeding
phagotrophic
protists
differed
between
later
diseased
at
establishment.
The
relative
abundance
phagotrophs
negatively
correlated
with
growth,
suggesting
predator-prey
interactions
influence
performance.
Furthermore,
likely
shifted
bacterial
functioning
enhancing
pathogen-suppressing
secondary
metabolite
involved
in
mitigating
success.
Conclusions
illustrate
importance
top-down
controllers
propose
perspective,
protists,
provides
optimal
next
step
predicting
FEMS Microbiology Ecology,
Journal Year:
2016,
Volume and Issue:
92(8), P. fiw119 - fiw119
Published: June 7, 2016
Here
we
discuss
the
advantages
of
majority
this
versatile
and
diverse
group
microorganisms
for
plant
health
growth
as
demonstrated
by
their
contribution
to
disease-suppressive
soils,
antifungal
antibacterial
activities,
ability
produce
volatile
compounds
capacity
enhance
biomass.
Although
much
is
still
be
discovered
about
colonization
strategies
molecular
interactions
between
roots
these
microorganisms,
they
are
destined
become
important
players
in
field
growth-promoting
rhizobacteria
agriculture.
Frontiers in Microbiology,
Journal Year:
2017,
Volume and Issue:
8
Published: Dec. 18, 2017
Disease
suppressive
soils
offer
effective
protection
to
plants
against
infection
by
soil-borne
pathogens,
including
fungi,
oomycetes,
bacteria
and
nematodes.
The
specific
disease
suppression
that
operates
in
these
is,
most
cases,
microbial
origin.
Therefore,
are
considered
as
a
rich
resource
for
the
discovery
of
beneficial
microorganisms
with
novel
antimicrobial
other
plant
protective
traits.
To
date,
several
genera
have
been
proposed
key
players
suppressiveness
soils,
but
complexity
interactions
well
underlying
mechanisms
traits
remain
elusive
soils.
Recent
developments
next
generation
sequencing
'omics
technologies
provided
new
insights
into
ecology
identification
consortia
involved
suppressiveness.
Here,
we
review
results
recent
'omics-based
studies
on
basis
emphasis
role
rhizosphere
this
intriguing
microbiological
phenomenon.
Saudi Journal of Biological Sciences,
Journal Year:
2019,
Volume and Issue:
26(7), P. 1315 - 1324
Published: June 4, 2019
Tomato
(Lycopersicon
esculentum)
is
one
of
the
widely
grown
vegetables
worldwide.
Fusarium
oxysporum
f.
sp.
lycopersici
(FOL)
significant
contributory
pathogen
tomato
vascular
wilt.
The
initial
symptoms
disease
appear
in
lower
leaves
gradually,
trail
by
wilting
plants.
It
has
been
reported
that
FOL
penetrates
plant,
colonizing
and
leaving
tissue
dark
brown,
this
discoloration
extends
to
apex,
leading
plants
wilting,
collapsing
dying.
Therefore,
it
accepted
caused
fungus
result
a
combination
various
physiological
activities,
including
accumulation
fungal
mycelia
around
xylem,
mycotoxin
production,
inactivation
host
defense,
production
tyloses;
however,
are
variable.
selection
molecular
markers
may
be
more
effective
means
screening
races.
Several
studies
on
detection
have
carried
out
suggested
potency
technique
for
diagnosing
FOL.
This
review
focuses
biology
variability
FOL,
understanding
presenting
holistic
picture
wilt
relation
model,
biology,
virulence.
We
conclude
genomic
proteomic
approachesare
greater
tools
identification
informative
candidates
involved
pathogenicity,
which
can
considered
as
approaches
managing
disease.
Microbiome,
Journal Year:
2020,
Volume and Issue:
8(1)
Published: March 3, 2020
Abstract
Background
Plant
health
is
intimately
influenced
by
the
rhizosphere
microbiome,
a
complex
assembly
of
organisms
that
changes
markedly
across
plant
growth.
However,
most
microbiome
research
has
focused
on
fractions
this
particularly
bacteria
and
fungi.
It
remains
unknown
how
other
microbial
components,
especially
key
predators—protists—are
linked
to
health.
Here,
we
investigated
holistic
including
bacteria,
eukaryotes
(fungi
protists),
as
well
functional
metabolism
genes.
We
these
communities
genes
throughout
growth
tomato
plants
either
developed
disease
symptoms
or
remained
healthy
under
field
conditions.
Results
found
pathogen
dynamics
best
predicted
protists.
More
specifically,
microbial-feeding
phagotrophic
protists
differed
between
later
diseased
at
establishment.
The
relative
abundance
phagotrophs
negatively
correlated
with
growth,
suggesting
predator-prey
interactions
influence
performance.
Furthermore,
likely
shifted
bacterial
functioning
enhancing
pathogen-suppressing
secondary
metabolite
involved
in
mitigating
success.
Conclusions
illustrate
importance
top-down
controllers
propose
perspective,
protists,
provides
optimal
next
step
predicting