Epigenetics of Modified DNA Bases: 5-Methylcytosine and Beyond DOI Creative Commons
Suresh Kumar, Viswanathan Chinnusamy,

Trilochan Mohapatra

et al.

Frontiers in Genetics, Journal Year: 2018, Volume and Issue: 9

Published: Dec. 18, 2018

Modification of DNA bases plays vital roles in the epigenetic control gene expression both animals and plants. Though much attention is given to conventional signature 5-methylcytosine (5-mC), field epigenetics attracting increased scientific interest through discovery additional modifications their controlling expression. Theoretically, each can be modified; however, cytosine adenine only are known so far. This review focuses on recent findings well-studied yet poorly characterized modification which serve as an layer regulation discuss potential Cytosine at symmetric (CG, CHG) asymmetric (CHH) contexts a key feature. In addition ROS1 family mediated demethylation, Ten-Eleven Translocation proteins-mediated hydroxylation 5-mC 5-hydroxymethylcytosine active demethylation pathway also discussed. The marks associated with several cellular developmental processes, pluripotency stem cells, neuron cell development, tumor development animals. Therefore, most recently discovered N6-methyladenine, mark regulatory potential, described. Interestingly, these newly found genomes lack canonical 5-mC, signifying independent functions. These modified considered important players epigenomics. for combinatorial interaction among suggests that codon likely substantially more complicated than it thought today.

Language: Английский

The genetic basis of disease DOI Creative Commons
Maria Jackson, Leah Marks, Gerhard May

et al.

Essays in Biochemistry, Journal Year: 2018, Volume and Issue: 62(5), P. 643 - 723

Published: Dec. 3, 2018

Genetics plays a role, to greater or lesser extent, in all diseases. Variations our DNA and differences how that functions (alone combinations), alongside the environment (which encompasses lifestyle), contribute disease processes. This review explores genetic basis of human disease, including single gene disorders, chromosomal imbalances, epigenetics, cancer complex considers understanding technological advances can be applied provision appropriate diagnosis, management therapy for patients.

Language: Английский

Citations

245

Rethinking HSF1 in Stress, Development, and Organismal Health DOI
Jian Li, Johnathan Labbadia, Richard I. Morimoto

et al.

Trends in Cell Biology, Journal Year: 2017, Volume and Issue: 27(12), P. 895 - 905

Published: Sept. 8, 2017

Language: Английский

Citations

244

Long Noncoding RNAs in Cancer and Therapeutic Potential DOI
Arun Renganathan, Emanuela Felley‐Bosco

Advances in experimental medicine and biology, Journal Year: 2017, Volume and Issue: unknown, P. 199 - 222

Published: Jan. 1, 2017

Language: Английский

Citations

237

Epigenetic heterogeneity in cancer DOI Creative Commons
Mingzhou Guo, Yaojun Peng, Aiai Gao

et al.

Biomarker Research, Journal Year: 2019, Volume and Issue: 7(1)

Published: Oct. 31, 2019

Phenotypic and functional heterogeneity is one of the hallmarks human cancers. Tumor genotype variations among tumors within different patients are known as interpatient heterogeneity, variability multiple same type arising in patient referred to intra-patient heterogeneity. Subpopulations cancer cells with distinct phenotypic molecular features a tumor called intratumor (ITH). Since Nowell proposed clonal evolution cell populations 1976, especially ITH, was actively studied. Research has focused on genetic basis cancer, particularly mutational activation oncogenes or inactivation tumor-suppressor genes (TSGs). The phenomenon ITH commonly explained by Darwinian-like single tumor. Despite monoclonal origin most cancers, new clones arise during progression due continuous acquisition mutations. It clear that disruption "epigenetic machinery" plays an important role development. Aberrant epigenetic changes occur more frequently than gene mutations epigenome at intersection environment genome. Epigenetic dysregulation occurs earliest stage cancer. current trend therapy use drugs reverse and/or delay future resistance therapies. A majority therapies fail achieve durable responses, which often attributed ITH. may drug heterogeneous Complete understanding assist designing combinations targeted based information extracted from individual tumors.

Language: Английский

Citations

231

Epigenetics of Modified DNA Bases: 5-Methylcytosine and Beyond DOI Creative Commons
Suresh Kumar, Viswanathan Chinnusamy,

Trilochan Mohapatra

et al.

Frontiers in Genetics, Journal Year: 2018, Volume and Issue: 9

Published: Dec. 18, 2018

Modification of DNA bases plays vital roles in the epigenetic control gene expression both animals and plants. Though much attention is given to conventional signature 5-methylcytosine (5-mC), field epigenetics attracting increased scientific interest through discovery additional modifications their controlling expression. Theoretically, each can be modified; however, cytosine adenine only are known so far. This review focuses on recent findings well-studied yet poorly characterized modification which serve as an layer regulation discuss potential Cytosine at symmetric (CG, CHG) asymmetric (CHH) contexts a key feature. In addition ROS1 family mediated demethylation, Ten-Eleven Translocation proteins-mediated hydroxylation 5-mC 5-hydroxymethylcytosine active demethylation pathway also discussed. The marks associated with several cellular developmental processes, pluripotency stem cells, neuron cell development, tumor development animals. Therefore, most recently discovered N6-methyladenine, mark regulatory potential, described. Interestingly, these newly found genomes lack canonical 5-mC, signifying independent functions. These modified considered important players epigenomics. for combinatorial interaction among suggests that codon likely substantially more complicated than it thought today.

Language: Английский

Citations

230