Nature Communications,
Journal Year:
2021,
Volume and Issue:
12(1)
Published: April 9, 2021
Abstract
Prime
editors
(PEs)
mediate
genome
modification
without
utilizing
double-stranded
DNA
breaks
or
exogenous
donor
as
a
template.
PEs
facilitate
nucleotide
substitutions
local
insertions
deletions
within
the
based
on
template
sequence
encoded
prime
editing
guide
RNA
(pegRNA).
However,
efficacy
of
in
adult
mice
has
not
been
established.
Here
we
report
an
NLS-optimized
SpCas9-based
editor
that
improves
efficiency
both
fluorescent
reporter
cells
and
at
endogenous
loci
cultured
cell
lines.
Using
this
system,
could
also
seed
tumor
formation
through
somatic
mouse.
Finally,
successfully
utilize
dual
adeno-associated
virus
(AAVs)
for
delivery
split-intein
demonstrate
system
enables
correction
pathogenic
mutation
mouse
liver.
Our
findings
further
establish
broad
potential
technology
directed
installation
modifications
vivo,
with
important
implications
disease
modeling
correction.
Plants,
Journal Year:
2021,
Volume and Issue:
10(4), P. 635 - 635
Published: March 27, 2021
Worldwide,
the
effects
of
metal
and
metalloid
toxicity
are
increasing,
mainly
due
to
anthropogenic
causes.
Soil
contamination
ranks
among
most
important
factors,
since
it
affects
crop
yield,
metals/metalloids
can
enter
food
chain
undergo
biomagnification,
having
concomitant
on
human
health
alterations
environment.
Plants
have
developed
complex
mechanisms
overcome
these
biotic
abiotic
stresses
during
evolution.
Metals
metalloids
exert
several
plants
generated
by
elements
such
as
Zn,
Cu,
Al,
Pb,
Cd,
As,
others.
The
main
strategies
involve
hyperaccumulation,
tolerance,
exclusion,
chelation
with
organic
molecules.
Recent
studies
in
omics
era
increased
knowledge
plant
genome
transcriptome
plasticity
defend
against
stimuli.
aim
present
review
is
summarize
relevant
findings
which
take
up,
accumulate,
transport,
tolerate,
respond
this
metal/metalloid
stress.
We
also
address
some
potential
applications
biotechnology
improve
tolerance
or
increase
accumulation.
Bone Research,
Journal Year:
2022,
Volume and Issue:
10(1)
Published: Sept. 20, 2022
Abstract
Osteoarthritis
(OA)
is
the
most
common
degenerative
joint
disease
that
causes
painful
swelling
and
permanent
damage
to
joints
in
body.
The
molecular
mechanisms
of
OA
are
currently
unknown.
a
heterogeneous
affects
entire
joint,
multiple
tissues
altered
during
development.
To
better
understand
pathological
OA,
new
approaches,
methods,
techniques
need
be
used
pathogenesis.
In
this
review,
we
first
focus
on
epigenetic
regulation
with
particular
DNA
methylation,
histone
modification,
microRNA
regulation,
followed
by
summary
several
key
mediators
OA-associated
pain.
We
then
introduce
innovative
have
been
will
continue
fields
pain,
such
as
CRISPR,
scRNA
sequencing,
lineage
tracing.
Next,
discuss
timely
updates
concerning
cell
death
pathology,
including
pyroptosis,
ferroptosis,
autophagy,
well
their
individual
roles
potential
targets
treating
OA.
Finally,
our
review
highlights
directions
role
synovial
lymphatic
system
An
improved
understanding
pathogenesis
aid
development
more
specific
effective
therapeutic
interventions
for
The CRISPR Journal,
Journal Year:
2020,
Volume and Issue:
3(6), P. 462 - 469
Published: Dec. 1, 2020
Automated
classification
of
CRISPR-Cas
systems
has
been
challenged
by
their
dynamic
nature
and
expanding
classification.
Here,
we
developed
CRISPRCasTyper,
an
automated
tool
with
improved
capabilities
for
identifying
typing
CRISPR
arrays
cas
loci
based
on
the
latest
nomenclature
(44
subtypes/variants).
As
a
novel
feature,
CRISPRCasTyper
uses
machine
learning
approach
to
subtype
sequences
repeats,
which
allows
orphan
distant
arrays.
provides
graphical
output,
where
CRISPRs
operons
are
visualized
as
gene
maps,
thus
aiding
annotation
partial
through
synteny.
was
benchmarked
against
manually
curated
set
31
subtypes
median
accuracy
98.6%
used
explore
diversity
across
>3,000
metagenomes.
Altogether,
present
up-to-date
software
prediction
loci.
is
available
conda
web
server
(cctyper.crispr.dk).
Nature Communications,
Journal Year:
2021,
Volume and Issue:
12(1)
Published: April 9, 2021
Abstract
Prime
editors
(PEs)
mediate
genome
modification
without
utilizing
double-stranded
DNA
breaks
or
exogenous
donor
as
a
template.
PEs
facilitate
nucleotide
substitutions
local
insertions
deletions
within
the
based
on
template
sequence
encoded
prime
editing
guide
RNA
(pegRNA).
However,
efficacy
of
in
adult
mice
has
not
been
established.
Here
we
report
an
NLS-optimized
SpCas9-based
editor
that
improves
efficiency
both
fluorescent
reporter
cells
and
at
endogenous
loci
cultured
cell
lines.
Using
this
system,
could
also
seed
tumor
formation
through
somatic
mouse.
Finally,
successfully
utilize
dual
adeno-associated
virus
(AAVs)
for
delivery
split-intein
demonstrate
system
enables
correction
pathogenic
mutation
mouse
liver.
Our
findings
further
establish
broad
potential
technology
directed
installation
modifications
vivo,
with
important
implications
disease
modeling
correction.