Frontiers in Cellular and Infection Microbiology,
Journal Year:
2025,
Volume and Issue:
15
Published: April 7, 2025
Non-pharmaceutical
interventions
(NPIs)
implemented
during
the
COVID-19
pandemic
had
a
significant
impact
on
prevalence
of
various
acute
respiratory
infections
(ARIs)
pathogens.
We
collected
337,310
real-time
PCR
results
for
13
pathogens
from
clinical
samples
between
January
2018
and
2024
to
assess
changes
ARIs
among
children
before
after
pandemic.
A
variety
pathogens,
including
Influenza
(Flu
A),
B
B),
Adenovirus
(ADV),
Rhinovirus
(RhV),
Respiratory
Syncytial
Virus
(RSV),
as
well
co-infecting
bacterial
such
Klebsiella
pneumoniae
(KPN),
Pseudomonas
aeruginosa
(PAE),
Streptococcus
(SP),
Haemophilus
influenzae
(HI),
Listeria
monocytogenes
(LP),
reached
peak
positive
rate
at
age
3.
The
susceptible
Mycoplasma
(MP)
was
3
7
years
old.
Compared
pre-COVID
period,
rates
Flu
A,
MP,
ADV,
SP,
HI,
Staphylococcus
aureus
(SA)
KPN
decreased
And
PAE
increased.
period
pandemic,
RSV,
RhV,
KPN,
SA
were
increased
Conversely,
B,
Parainfluenza
virus
(PIV)
decreased.
implementation
NPIs
interrupted
circulation
However,
release
reduced
baseline
population
immunity,
may
contribute
resurgence
children.
Science Immunology,
Journal Year:
2023,
Volume and Issue:
8(83)
Published: May 5, 2023
Rare
immune-mediated
cardiac
tissue
inflammation
can
occur
after
vaccination,
including
SARS-CoV-2
mRNA
vaccines.
However,
the
underlying
immune
cellular
and
molecular
mechanisms
driving
this
pathology
remain
poorly
understood.
Here,
we
investigated
a
cohort
of
patients
who
developed
myocarditis
and/or
pericarditis
with
elevated
troponin,
B-type
natriuretic
peptide,
C-reactive
protein
levels
as
well
imaging
abnormalities
shortly
vaccination.
Contrary
to
early
hypotheses,
did
not
demonstrate
features
hypersensitivity
myocarditis,
nor
they
have
exaggerated
SARS-CoV-2-specific
or
neutralizing
antibody
responses
consistent
hyperimmune
humoral
mechanism.
We
additionally
found
no
evidence
cardiac-targeted
autoantibodies.
Instead,
unbiased
systematic
serum
profiling
revealed
elevations
in
circulating
interleukins
(IL-1β,
IL-1RA,
IL-15),
chemokines
(CCL4,
CXCL1,
CXCL10),
matrix
metalloproteases
(MMP1,
MMP8,
MMP9,
TIMP1).
Subsequent
deep
using
single-cell
RNA
repertoire
sequencing
peripheral
blood
mononuclear
cells
during
acute
disease
expansion
activated
CXCR3
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Feb. 10, 2023
Long
COVID
(LC),
a
type
of
post-acute
sequelae
SARS-CoV-2
infection
(PASC),
occurs
after
at
least
10%
infections,
yet
its
etiology
remains
poorly
understood.
Here,
we
used
multiple
"omics"
assays
(CyTOF,
RNAseq/scRNAseq,
Olink)
and
serology
to
deeply
characterize
both
global
SARS-CoV-2-specific
immunity
from
blood
individuals
with
clear
LC
non-LC
clinical
trajectories,
8
months
following
prior
receipt
any
vaccine.
Our
analysis
focused
on
deep
phenotyping
T
cells,
which
play
important
roles
in
against
may
also
contribute
COVID-19
pathogenesis.
findings
demonstrate
that
exhibit
systemic
inflammation
immune
dysregulation.
This
is
evidenced
by
differences
cell
subset
distribution
ways
imply
ongoing
responses,
as
well
sex-specific
perturbations
cytolytic
subsets.
Individuals
harbored
increased
frequencies
CD4+
cells
poised
migrate
inflamed
tissues,
exhausted
CD8+
cells.
They
significantly
higher
levels
antibodies,
contrast
individuals,
exhibited
mis-coordination
between
their
B
responses.
RNAseq/scRNAseq
Olink
analyses
similarly
revealed
dysregulatory
mechanisms,
along
non-immune
associated
perturbations,
LC.
Collectively,
our
data
suggest
proper
crosstalk
the
humoral
cellular
arms
adaptive
has
broken
down
LC,
this,
perhaps
context
persistent
virus,
leads
dysregulation,
inflammation,
symptoms
this
debilitating
condition.
Signal Transduction and Targeted Therapy,
Journal Year:
2025,
Volume and Issue:
10(1)
Published: Jan. 7, 2025
Abstract
The
mucosal
immune
system,
as
the
most
extensive
peripheral
network,
serves
frontline
defense
against
a
myriad
of
microbial
and
dietary
antigens.
It
is
crucial
in
preventing
pathogen
invasion
establishing
tolerance.
A
comprehensive
understanding
immunity
essential
for
developing
treatments
that
can
effectively
target
diseases
at
their
entry
points,
thereby
minimizing
overall
impact
on
body.
Despite
its
importance,
our
knowledge
remains
incomplete,
necessitating
further
research.
outbreak
severe
acute
respiratory
syndrome
coronavirus
2
(SARS-CoV-2)
has
underscored
critical
role
disease
prevention
treatment.
This
systematic
review
focuses
dynamic
interactions
between
mucosa-associated
lymphoid
structures
related
diseases.
We
delve
into
basic
functions
these
tissues
during
processes
explore
intricate
regulatory
networks
mechanisms
involved.
Additionally,
we
summarize
novel
therapies
clinical
research
advances
immunity-related
also
addresses
challenges
vaccines,
which
aim
to
induce
specific
responses
while
maintaining
tolerance
non-pathogenic
microbes.
Innovative
therapies,
such
nanoparticle
vaccines
inhalable
antibodies,
show
promise
enhancing
offer
potential
improved
Genome Medicine,
Journal Year:
2023,
Volume and Issue:
15(1)
Published: Sept. 12, 2023
Abstract
Background
The
immune
response
to
severe
acute
respiratory
syndrome
coronavirus
2
(SARS-CoV-2)
infection
in
COVID-19
patients
has
been
extensively
investigated.
However,
much
less
is
known
about
the
long-term
effects
of
and
how
it
could
affect
system
its
capacity
respond
future
perturbations.
Methods
Using
a
targeted
single-cell
multiomics
approach,
we
have
recently
identified
prolonged
anti-inflammatory
gene
expression
signature
T
NK
cells
type
1
diabetes
treated
with
low-dose
IL-2.
Here,
investigated
dynamics
this
three
independent
cohorts
patients:
(i)
Oxford
Multi-omics
Blood
Atlas
(COMBAT)
dataset,
cross-sectional
cohort
including
77
ten
healthy
donors;
(ii)
INCOV
consisting
525
samples
taken
from
209
during
after
infection;
(iii)
longitudinal
dataset
269
whole-blood
139
followed
for
period
up
7
months
onset
symptoms
using
bulk
transcriptomic
approach.
Results
We
discovered
that
SARS-CoV-2
leads
alteration
profile
circulating
T,
B
monocytes.
Some
genes
affected
were
same
as
those
present
IL-2-induced
but
regulated
opposite
direction,
implying
pro-inflammatory
status.
altered
transcriptional
was
detected
at
least
disease
not
observed
influenza
or
sepsis.
Gene
network
analysis
suggested
central
role
factor
NF-κB
regulation
alterations.
Conclusions
causes
increase
status
predispose
post-acute
development
health
consequences,
autoimmune
disease,
reactivation
other
viruses
disruption
host
system-microbiome
ecosystem.
Frontiers in Immunology,
Journal Year:
2023,
Volume and Issue:
14
Published: July 20, 2023
Background
The
role
of
adaptive
immune
responses
in
long
COVID
remains
poorly
understood,
with
contrasting
hypotheses
suggesting
either
an
insufficient
antiviral
response
or
excessive
associated
inflammatory
damage.
To
address
this
issue,
we
set
to
characterize
humoral
and
CD4+
T
cell
patients
prior
SARS-CoV-2
vaccination.
Methods
Long
who
were
seropositive
(LC+,
n=28)
seronegative
(LC-,
n=23)
by
spike
ELISA
assay
recruited
based
on
(i)
initial
infection
documented
PCR
the
conjunction
three
major
signs
COVID-19
(ii)
persistence
resurgence
at
least
3
symptoms
for
over
months.
They
compared
resolved
(RE,
n=29)
uninfected
control
individuals
(HD,
n=29).
Results
spectrum
persistent
proved
similar
both
groups,
a
trend
higher
number
group
(median=6
vs
4.5;
P=0.01).
use
highly
sensitive
S-flow
enabled
detection
low
levels
spike-specific
IgG
22.7%
ELISA-seronegative
(LC-)
patients.
In
contrast,
uniformly
high
LC+
RE
groups.
Multiplexed
antibody
analyses
30
different
viral
antigens
showed
that
LC-
had
defective
all
proteins
tested
but
most
cases
preserved
other
viruses.
A
primary
line
revealed
detectable
SARS-CoV-2-specific
CD4
39.1%
patients,
while
frequencies
Correlation
overall
strong
associations
between
cellular
responses,
exceptions
group.
Conclusions
These
findings
provide
evidence
two
types
COVID.
Seropositive
coordinated
as
those
recovered
specific
cells
and/or
antibodies
close
half
(52.2%).
divergent
sharing
comparable
raise
possibility
multiple
etiologies
medRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: April 5, 2024
Abstract
Outcomes
following
SARS-CoV-2
infection
are
variable;
whilst
the
majority
of
patients
recover
without
serious
complications,
a
subset
develop
prolonged
illness
termed
Long
COVID
or
post-acute
sequelae
(PASC).
The
pathophysiology
underlying
remains
unclear
but
appears
to
involve
multiple
mechanisms
including
persistent
inflammation,
coagulopathy,
autoimmunity,
and
organ
damage.
Studies
suggest
that
microclots,
also
known
as
fibrinaloids,
play
role
in
COVID.
In
this
context,
we
developed
method
quantify
microclots
investigated
relationship
between
microclot
counts
We
show
cohort,
platelet-poor
plasma
from
samples
had
higher
count
compared
control
groups
retained
wide
distribution
counts.
Recent
COVID-19
infections
were
seen
be
associated
with
than
equivalent
subsequent
time-dependent
reduction
Our
findings
could
potential
biomarker
disease
and/or
treatment
target
some
patients.