Actin Bundles Dynamics and Architecture DOI Creative Commons
Sudeepa Rajan, Dmitri S. Kudryashov, Emil Reisler

et al.

Biomolecules, Journal Year: 2023, Volume and Issue: 13(3), P. 450 - 450

Published: Feb. 28, 2023

Cells use the actin cytoskeleton for many of their functions, including division, adhesion, mechanosensing, endo- and phagocytosis, migration, invasion. Actin bundles are main constituent actin-rich structures involved in these processes. An ever-increasing number proteins that crosslink into or regulate morphology is being identified cells. With recent advances high-resolution microscopy imaging techniques, complex process formation multiple forms physiological beginning to be better understood. Here, we review physiochemical biological properties four families highly conserved abundant actin-bundling proteins, namely, α-actinin, fimbrin/plastin, fascin, espin. We describe similarities differences between role bundles, properties—both related unrelated bundling abilities. also some aspects general mechanism formation, which known from available information on activity key partners this process.

Language: Английский

Astrocyte contribution to dysfunction, risk and progression in neurodegenerative disorders DOI
Ashley N. Brandebura, Adrien Paumier, Tarik Seref Onur

et al.

Nature reviews. Neuroscience, Journal Year: 2022, Volume and Issue: 24(1), P. 23 - 39

Published: Oct. 31, 2022

Language: Английский

Citations

260

Liquid–liquid phase separation drives cellular function and dysfunction in cancer DOI
Sohum Mehta, Jin Zhang

Nature reviews. Cancer, Journal Year: 2022, Volume and Issue: 22(4), P. 239 - 252

Published: Feb. 11, 2022

Language: Английский

Citations

255

Modulating biomolecular condensates: a novel approach to drug discovery DOI Creative Commons
Diana M. Mitrea, Matthäus Mittasch, Beatriz Ferreira Gomes

et al.

Nature Reviews Drug Discovery, Journal Year: 2022, Volume and Issue: 21(11), P. 841 - 862

Published: Aug. 16, 2022

In the past decade, membraneless assemblies known as biomolecular condensates have been reported to play key roles in many cellular functions by compartmentalizing specific proteins and nucleic acids subcellular environments with distinct properties. Furthermore, growing evidence supports view that often form phase separation, which a single-phase system demixes into two-phase consisting of condensed dilute particular biomolecules. Emerging understanding condensate function normal aberrant states, mechanisms formation, is providing new insights human disease revealing novel therapeutic opportunities. this Perspective, we propose such could enable previously unexplored drug discovery approach based on identifying condensate-modifying therapeutics (c-mods), discuss strategies, techniques challenges involved.

Language: Английский

Citations

232

Primary cilia as dynamic and diverse signalling hubs in development and disease DOI
Pleasantine Mill, Søren T. Christensen, Lotte B. Pedersen

et al.

Nature Reviews Genetics, Journal Year: 2023, Volume and Issue: 24(7), P. 421 - 441

Published: April 18, 2023

Language: Английский

Citations

184

Visible-Light-Mediated Modification and Manipulation of Biomacromolecules DOI

Vivian M. Lechner,

Manuel Nappi, Patrick J. Deneny

et al.

Chemical Reviews, Journal Year: 2021, Volume and Issue: 122(2), P. 1752 - 1829

Published: Sept. 21, 2021

Chemically modified biomacromolecules─i.e., proteins, nucleic acids, glycans, and lipids─have become crucial tools in chemical biology. They are extensively used not only to elucidate cellular processes but also industrial applications, particularly the context of biopharmaceuticals. In order enable maximum scope for optimization, it is pivotal have a diverse array biomacromolecule modification methods at one's disposal. Chemistry has driven many significant advances this area, especially recently, numerous novel visible-light-induced photochemical approaches emerged. these reactions, light serves as an external source energy, enabling access highly reactive intermediates under exceedingly mild conditions with exquisite spatiotemporal control. While UV-induced transformations on biomacromolecules date back decades, visible unmistakable advantage being considerably more biocompatible, spectrum visible-light-driven now available, chiefly proteins acids. This review will discuss modifications native functional groups (FGs), including functionalization, labeling, cross-linking techniques well utility oxidative degradation mediated by photochemically generated oxygen species. Furthermore, non-native, bioorthogonal FGs be addressed, photoclick chemistry DNA-encoded library synthesis that allow manipulation activity biomacromolecule.

Language: Английский

Citations

144

An Introduction to Mass Spectrometry-Based Proteomics DOI Open Access
Steven R. Shuken

Journal of Proteome Research, Journal Year: 2023, Volume and Issue: 22(7), P. 2151 - 2171

Published: June 1, 2023

Mass spectrometry is unmatched in its versatility for studying practically any aspect of the proteome. Because foundations mass spectrometry-based proteomics are complex and span multiple scientific fields, can be perceived as having a high barrier to entry. This tutorial intended an accessible illustrated guide technical details relatively simple quantitative proteomic experiment. An attempt made explain relevant concepts those with limited knowledge basic understanding proteins. experimental overview provided, from beginning sample preparation analysis protein group quantities, explanations how data acquired, processed, analyzed. A selection advanced topics briefly surveyed works further reading cited. To conclude, brief discussion future given, considering next-generation sequencing technologies that may complement create fruitful proteomics.

Language: Английский

Citations

116

Strategies for monitoring cell–cell interactions DOI
Tyler J. Bechtel, Tamara Reyes Robles, Olugbeminiyi Fadeyi

et al.

Nature Chemical Biology, Journal Year: 2021, Volume and Issue: 17(6), P. 641 - 652

Published: May 25, 2021

Language: Английский

Citations

105

In-Cell Structural Biology by NMR: The Benefits of the Atomic Scale DOI
François‐Xavier Theillet

Chemical Reviews, Journal Year: 2022, Volume and Issue: 122(10), P. 9497 - 9570

Published: March 31, 2022

In-cell structural biology aims at extracting information about proteins or nucleic acids in their native, cellular environment. This emerging field holds great promise and is already providing new facts outlooks of interest both fundamental applied levels. NMR spectroscopy has important contributions on this stage: It brings a broad variety nuclei the atomic scale, which ensures its versatility uniqueness. Here, we detail methods, knowledge, applications biomedical engineering related to in-cell by NMR. We finally propose brief overview main other techniques (EPR, smFRET, cryo-ET, etc.) draw some advisable developments for In era large-scale screenings deep learning, accurate qualitative experimental evidence are as essential ever understand interior life cells. can generate such it does so scale. review meant deliver comprehensive but accessible information, with advanced technical details reflections nature results, future field.

Language: Английский

Citations

81

μMap-Red: Proximity Labeling by Red Light Photocatalysis DOI

Benito F. Buksh,

Steve D. Knutson, James V. Oakley

et al.

Journal of the American Chemical Society, Journal Year: 2022, Volume and Issue: 144(14), P. 6154 - 6162

Published: April 1, 2022

Modern proximity labeling techniques have enabled significant advances in understanding biomolecular interactions. However, current tools primarily utilize activation modes that are incompatible with complex biological environments, limiting our ability to interrogate cell- and tissue-level microenvironments animal models. Here, we report μMap-Red, a platform uses red-light-excited Sn

Language: Английский

Citations

73

Dynamic mapping of proteome trafficking within and between living cells by TransitID DOI Creative Commons
Wei Qin, Joleen S. Cheah, Charles Xu

et al.

Cell, Journal Year: 2023, Volume and Issue: 186(15), P. 3307 - 3324.e30

Published: June 28, 2023

Language: Английский

Citations

73