ChemBioChem,
Journal Year:
2023,
Volume and Issue:
24(12)
Published: Feb. 23, 2023
Abstract
Visualizing
the
structure
and
dynamics
of
biomolecules
is
critical
to
understand
biological
function,
requires
methods
fluorescently
label
targets
interest
in
their
cellular
context.
Self‐labelling
proteins,
which
combine
a
genetically
encoded
tag
with
small‐molecule
fluorophore,
have
attracted
considerable
attention
for
this
purpose,
as
they
can
overcome
limitations
fluorescent
proteins.
Among
them,
HaloTag
protein
most
broadly
used,
showing
fast
specific
labelling
small,
easy
functionalize
cell‐permeant
ligand.
Synthetic
chemistry
engineering
provided
portfolio
powerful
imaging
tools
exploiting
HaloTag,
along
general
optimize
adapt
them
applications.
Here,
we
provide
an
overview
reporters
based
on
biosensing,
highlighting
strategies
JACS Au,
Journal Year:
2021,
Volume and Issue:
1(5), P. 690 - 696
Published: April 23, 2021
Fluorescence
microscopy
relies
on
dyes
that
absorb
and
then
emit
photons.
In
addition
to
fluorescence,
fluorophores
can
undergo
photochemical
processes
decrease
quantum
yield
or
result
in
spectral
shifts
irreversible
photobleaching.
Chemical
strategies
suppress
these
undesirable
pathways—thereby
increasing
the
brightness
photostability
of
fluorophores—are
crucial
for
advancing
frontier
bioimaging.
Here,
we
describe
a
general
method
improve
small-molecule
by
incorporating
deuterium
into
alkylamino
auxochromes
rhodamines
other
dyes.
This
strategy
increases
fluorescence
yield,
inhibits
photochemically
induced
shifts,
slows
irreparable
photobleaching,
yielding
next-generation
labels
with
improved
performance
cellular
imaging
experiments.
Chemical Society Reviews,
Journal Year:
2023,
Volume and Issue:
52(16), P. 5607 - 5651
Published: Jan. 1, 2023
Since
their
inception,
rhodamine
dyes
have
been
extensively
applied
in
biotechnology
as
fluorescent
markers
or
for
the
detection
of
biomolecules
owing
to
good
optical
physical
properties.
Accordingly,
they
emerged
a
powerful
tool
visualization
living
systems.
In
addition
fluorescence
bioimaging,
molecular
design
derivatives
with
disease
therapeutic
functions
(e.g.,
cancer
and
bacterial
infection)
has
recently
attracted
increased
research
attention,
which
is
significantly
important
construction
libraries
diagnostic
integration.
However,
reviews
focusing
on
integrated
strategies
dye-based
diagnosis
treatment
wide
application
are
extremely
rare.
this
review,
first,
brief
history
development
dyes,
transformation
from
bioimaging
therapy,
concept
optics-based
integration
its
significance
human
presented.
Next,
systematic
review
several
excellent
rhodamine-based
well
treatment,
Finally,
challenges
practical
future
outlook
clinical
translation
also
discussed.
Journal of the American Chemical Society,
Journal Year:
2021,
Volume and Issue:
143(41), P. 17136 - 17143
Published: Oct. 11, 2021
Fluorescence
bioimaging
through
the
second
near-infrared
window
(NIR-II,
1000–1700
nm)
has
attracted
much
attention
due
to
its
deep
penetration
and
high
contrast.
However,
exploring
new
fluorescent
materials,
especially
small
molecular
fluorophores
with
long
wavelength
brightness,
is
still
quite
challenging.
By
expanding
π-conjugation
enhancing
intramolecular
charge
transfer
effect,
herein
we
report
a
series
of
xanthene-based
NIR-II
dyes,
named
VIXs.
Among
these
VIX-4
exhibits
best
performance
fluorescence
emission
at
1210
nm
brightness
been
used
for
dynamically
imaging
blood
flow
mice
200
fps.
virtue
spatiotemporal
resolution
dynamic
imaging,
can
distinguish
directly
artery
vein
direction
measure
volume
by
videos.
This
study
provides
not
only
an
effective
tool
spatial
temporal
but
also
promising
conjugated
skeleton
dyes.
Nature Methods,
Journal Year:
2021,
Volume and Issue:
19(1), P. 65 - 70
Published: Dec. 16, 2021
Abstract
Self-labeling
protein
tags
such
as
HaloTag
are
powerful
tools
that
can
label
fusion
proteins
with
synthetic
fluorophores
for
use
in
fluorescence
microscopy.
Here
we
introduce
variants
either
increased
or
decreased
brightness
and
lifetime
compared
HaloTag7
when
labeled
rhodamines.
Combining
these
enabled
live-cell
multiplexing
of
three
cellular
targets
one
spectral
channel
using
a
single
fluorophore
the
generation
lifetime-based
biosensor.
Additionally,
brightest
variant
showed
up
to
40%
higher
imaging
applications.
Journal of the American Chemical Society,
Journal Year:
2021,
Volume and Issue:
143(36), P. 14592 - 14600
Published: Aug. 30, 2021
Rhodamines
are
the
most
important
class
of
fluorophores
for
applications
in
live-cell
fluorescence
microscopy.
This
is
mainly
because
rhodamines
exist
a
dynamic
equilibrium
between
fluorescent
zwitterion
and
nonfluorescent
but
cell-permeable
spirocyclic
form.
Different
imaging
require
different
positions
this
equilibrium,
an
adjustment
poses
challenge
design
suitable
probes.
We
describe
here
how
conversion
ortho-carboxy
moiety
given
rhodamine
into
substituted
acyl
benzenesulfonamides
alkylamides
permits
systematic
tuning
spirocyclization
with
unprecedented
accuracy
over
large
range.
allows
one
to
transform
same
either
highly
fluorogenic
probe
live-cell-stimulated
emission
depletion
(STED)
microscopy
or
spontaneously
blinking
dye
single-molecule
localization
(SMLM).
used
approach
generate
differently
colored
probes
optimized
labeling
systems
applications.
Nature Genetics,
Journal Year:
2022,
Volume and Issue:
54(10), P. 1527 - 1533
Published: Sept. 19, 2022
Abstract
Oncogene
amplification
on
extrachromosomal
DNA
(ecDNA)
is
a
common
event,
driving
aggressive
tumor
growth,
drug
resistance
and
shorter
survival.
Currently,
the
impact
of
nonchromosomal
oncogene
inheritance—random
identity
by
descent—is
poorly
understood.
Also
unclear
ecDNA
somatic
variation
selection.
Here
integrating
theoretical
models
random
segregation,
unbiased
image
analysis,
CRISPR-based
tagging
with
live-cell
imaging
CRISPR-C,
we
demonstrate
that
inheritance
results
in
extensive
intratumoral
copy
number
heterogeneity
rapid
adaptation
to
metabolic
stress
targeted
treatment.
Observed
ecDNAs
benefit
host
cell
survival
or
growth
can
change
within
single
cycle.
predict,
priori,
some
features
ecDNA-containing
cancers.
These
properties
are
facilitated
ability
rapidly
adapt
genomes
way
not
possible
through
chromosomal
amplification.
show
how
pattern
contributes
poor
outcomes
for
patients
cancer.
Advanced Materials,
Journal Year:
2023,
Volume and Issue:
35(12)
Published: Jan. 11, 2023
Phototheranostics
have
emerged
and
flourished
as
a
promising
pattern
for
cancer
theranostics
owing
to
their
precise
photoinduced
diagnosis
therapeutic
meet
the
demands
of
precision
medicine.
The
information
effect
are
directly
determined
by
fluorescence
imaging
ability
photothermal
conversion
efficiency
(PCE)
phototheranostic
agents.
Hence,
how
balance
competitive
radiative
nonradiative
processes
agents
is
key
factor
evaluate
effect.
Herein,
molecules
named
ICRs
with
high
photostaibility
rationally
designed,
exhibiting
emission
in
second
near-infrared
window
(NIR-II,
1000-1700
nm)
PCE,
which
related
strong
donor-acceptor
(D-A)
interaction
reorganization
energy
Noteworthily,
ICR-Qu
stronger
D-A
large-sized
conjugated
unit
encapsulated
nanoparticles
exhibits
PCE
(81.1%).
In
addition,
ICR-QuNPs
used
(FLI),
photoacoustic
(PAI),
(PTI)
guide
deep-tissue
photonic
hyperthermia,
achieving
removal
inhibition
breast
cancer.
Furthermore,
combined
α-PD-1,
show
huge
potential
be
facile
efficient
tool
photo-immunotherapy.
More
importantly,
this
study
not
only
reports
an
"all-in-one"
polymethine-based
agent,
but
also
sheds
light
on
exploration
versatile
organic
future
practical
applications.