Microbiome,
Journal Year:
2024,
Volume and Issue:
12(1)
Published: May 9, 2024
Abstract
Background
Fungi
and
bacteria
coexist
in
a
wide
variety
of
environments,
their
interactions
are
now
recognized
as
the
norm
most
agroecosystems.
These
microbial
communities
harbor
keystone
taxa,
which
facilitate
connectivity
between
fungal
bacterial
communities,
influencing
composition
functions.
The
roots
plants
associated
with
arbuscular
mycorrhizal
(AM)
fungi,
develop
dense
networks
hyphae
soil.
surface
these
(called
hyphosphere)
is
region
where
multiple
can
occur,
e.g.,
exchanging
or
responding
to
each
other’s
metabolites.
However,
presence
importance
taxa
AM
hyphosphere
remain
largely
unknown.
Results
Here,
we
used
vitro
pot
cultivation
systems
fungi
investigate
whether
certain
were
able
shape
growing
potentially
improved
fitness
host.
Based
on
various
soil
leachates,
synthetic
found
that
under
organic
phosphorus
(P)
conditions,
could
selectively
recruit
enhanced
P
nutrition
competed
less
P-mobilizing
bacteria.
Specifically,
observed
privileged
interaction
isolate
Streptomyces
sp.
D1
genus
Rhizophagus
,
(1)
carbon
compounds
exuded
by
fungus
acquired
bacterium
mineralize
(2)
culturable
community
residing
was
part
regulated
D1,
primarily
inhibiting
weak
P-mineralizing
ability,
thereby
enhancing
acquire
P.
Conclusions
This
work
highlights
multi-functionality
fungal-bacteria
bacterial-bacterial
at
hyphal
fungi.
Frontiers in Plant Science,
Journal Year:
2021,
Volume and Issue:
12
Published: Feb. 1, 2021
Microplastics
(MPs)
are
ubiquitously
found
in
terrestrial
ecosystems
and
increasingly
recognized
as
a
factor
of
global
change
(GCF).
Current
research
shows
that
MP
can
alter
plant
growth,
soil
inherent
properties,
the
composition
activity
microbial
communities.
However,
knowledge
about
how
microplastic
affects
arbuscular
mycorrhizal
fungi
(AMF)
is
scarce.
For
plants
it
has
been
shown
both
increase
decrease
aboveground
biomass
reduce
root
diameter,
which
could
indirectly
cause
AMF
abundance
activity.
One
main
direct
effects
reduction
bulk
density,
translates
to
an
altered
pore
structure
water
transport.
Moreover,
especially
fibers
have
considerable
impacts
on
structure,
namely
size
distribution
stability
aggregates.
Therefore,
alters
number
parameters
determine
habitat
space
conditions
for
AMF.
We
expect
this
will
influence
functions
mediated
by
AMF,
such
aggregation,
nutrient
discuss
deal
with
other
GCFs
context
sustainable
food
production.
The
co-occurrence
several
GCFs,
e.g.,
elevated
temperature,
drought,
pesticides,
modify
impact
Furthermore,
ubiquitous
presence
also
relates
earth
system
processes,
net
primary
production
(NPP),
carbon
nitrogen
cycling,
involve
key
organisms.
future
research,
we
outline
experiments
should
be
prioritized.
Microbiome,
Journal Year:
2022,
Volume and Issue:
10(1)
Published: Nov. 25, 2022
Linking
the
identity
of
wild
microbes
with
their
ecophysiological
traits
and
environmental
functions
is
a
key
ambition
for
microbial
ecologists.
Of
many
techniques
that
strive
this
goal,
Stable-isotope
probing-SIP-remains
among
most
comprehensive
studying
whole
communities
in
situ.
In
DNA-SIP,
actively
growing
microorganisms
take
up
an
isotopically
heavy
substrate
build
heavier
DNA,
which
can
be
partitioned
by
density
into
multiple
fractions
sequenced.
However,
SIP
relatively
low
throughput
requires
significant
hands-on
labor.
We
designed
tested
semi-automated,
high-throughput
(HT-SIP)
pipeline
to
support
well-replicated,
temporally
resolved
amplicon
metagenomics
experiments.
applied
soil
microhabitat
ecological
importance-the
hyphosphere
zone
surrounding
arbuscular
mycorrhizal
fungal
(AMF)
hyphae.
AMF
form
symbiotic
relationships
plant
species
play
roles
terrestrial
nutrient
carbon
cycling.
Microorganisms,
Journal Year:
2022,
Volume and Issue:
10(12), P. 2399 - 2399
Published: Dec. 3, 2022
The
spatially
heterogeneous
distribution
of
soil
nutrients
is
ubiquitous
in
terrestrial
ecosystems
and
has
been
shown
to
promote
the
performance
plant
communities,
influence
species
coexistence,
alter
ecosystem
nutrient
dynamics.
Plants
interact
with
diverse
microbial
communities
that
lead
an
interdependent
relationship
(e.g.,
symbioses),
driving
community
productivity,
belowground
biodiversity,
functioning.
However,
potential
role
regulating
effect
heterogeneity
on
growth
little
studied.
Here,
we
highlight
ecological
importance
microorganisms
discuss
acquisition
mechanisms
soil.
We
also
examine
evolutionary
advantages
via
a
environment.
Lastly,
three-way
interaction
among
plants,
heterogeneity,
propose
areas
for
future
research
priorities.
By
clarifying
shaping
performance,
present
study
enhances
current
understanding
dynamics
context
patchily
distributed
nutrients.
The ISME Journal,
Journal Year:
2022,
Volume and Issue:
16(12), P. 2752 - 2762
Published: Sept. 9, 2022
Abstract
Drought
disrupts
soil
microbial
activity
and
many
biogeochemical
processes.
Although
plant-associated
fungi
can
support
plant
performance
nutrient
cycling
during
drought,
their
effects
on
nearby
drought-exposed
communities
are
not
well
resolved.
We
used
H218O
quantitative
stable
isotope
probing
(qSIP)
16S
rRNA
gene
profiling
to
investigate
bacterial
community
dynamics
following
water
limitation
in
the
hyphospheres
of
two
distinct
fungal
lineages
(Rhizophagus
irregularis
Serendipita
bescii)
grown
with
bioenergy
model
grass
Panicum
hallii.
In
uninoculated
soil,
a
history
resulted
significantly
lower
growth
potential
efficiency,
as
diversity
actively
growing
community.
contrast,
both
had
protective
effect
hyphosphere
exposed
limitation:
potential,
were
suppressed
by
soils
inoculated
either
fungus.
Despite
similar
at
level,
did
elicit
different
taxon-specific
responses,
was
greater
R.
compared
S.
bescii-inoculated
soils.
Several
taxa
that
responded
positively
inocula
belong
considered
drought
susceptible.
Overall,
qSIP
highlighted
treatment
structure
less
pronounced
using
traditional
profiling.
Together,
these
results
indicate
fungal–bacterial
synergies
may
resilience
moisture
limitation.
Microbiome,
Journal Year:
2024,
Volume and Issue:
12(1)
Published: May 9, 2024
Abstract
Background
Fungi
and
bacteria
coexist
in
a
wide
variety
of
environments,
their
interactions
are
now
recognized
as
the
norm
most
agroecosystems.
These
microbial
communities
harbor
keystone
taxa,
which
facilitate
connectivity
between
fungal
bacterial
communities,
influencing
composition
functions.
The
roots
plants
associated
with
arbuscular
mycorrhizal
(AM)
fungi,
develop
dense
networks
hyphae
soil.
surface
these
(called
hyphosphere)
is
region
where
multiple
can
occur,
e.g.,
exchanging
or
responding
to
each
other’s
metabolites.
However,
presence
importance
taxa
AM
hyphosphere
remain
largely
unknown.
Results
Here,
we
used
vitro
pot
cultivation
systems
fungi
investigate
whether
certain
were
able
shape
growing
potentially
improved
fitness
host.
Based
on
various
soil
leachates,
synthetic
found
that
under
organic
phosphorus
(P)
conditions,
could
selectively
recruit
enhanced
P
nutrition
competed
less
P-mobilizing
bacteria.
Specifically,
observed
privileged
interaction
isolate
Streptomyces
sp.
D1
genus
Rhizophagus
,
(1)
carbon
compounds
exuded
by
fungus
acquired
bacterium
mineralize
(2)
culturable
community
residing
was
part
regulated
D1,
primarily
inhibiting
weak
P-mineralizing
ability,
thereby
enhancing
acquire
P.
Conclusions
This
work
highlights
multi-functionality
fungal-bacteria
bacterial-bacterial
at
hyphal
fungi.