Functionally enriched human polymorphisms associate to species in the chronic wound microbiome
Rebecca Gabrilska,
No information about this author
Khalid Omeir,
No information about this author
Jacob Ancira
No information about this author
et al.
medRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2025,
Volume and Issue:
unknown
Published: Jan. 16, 2025
ABSTRACT
Chronic
wounds
are
a
burden
to
millions
of
patients
and
healthcare
providers
worldwide.
With
rising
incidence
prevalence,
there
is
an
urgent
need
address
non-healing
with
novel
approaches.
Impaired
wound
healing
has
been
shown
be
associated
microbiota,
multiple
bacterial
species
known
contribute
delays
in
closure.
Recent
evidence
suggests
human
genetics
may
shape
differences
composition
microbiomes,
unraveling
this
relationship
important
implications
for
understanding
bioburden
tailoring
treatment.
Here,
two-stage
microbiome
genome
wide
association
study
(mbGWAS;
n=509)
was
used
test
effects
on
the
relative
abundances
detected
chronic
using
16S
rRNA
gene
sequencing.
Sixteen
were
significantly
193
genetic
loci
distributed
across
25
non-overlapping
genomic
regions.
No
locus
more
than
one
species,
heritability
estimates
per
ranging
up
20%.
Functional
analyses
regions
resulted
overrepresentation
pertaining
pathways
relevant
microbial
infection
healing,
suggesting
that
interactions
jointly
influence
microenvironment.
Species
host
turn
exhibited
significant
co-occurrence
relationships
common
pathogens
including
Staphylococcus
aureus
Finegoldia
magna
.
Moreover,
overall
distance
among
related
their
composition.
Identification
such
biomarkers
reveals
new
mechanistic
insight
into
patient-microbiome
provides
avenue
identify
predictive
risk
factors
diagnosis
management
wounds.
Language: Английский
The role of yes‐associated protein in nasal inflammatory diseases
Eye & ENT Research,
Journal Year:
2025,
Volume and Issue:
unknown
Published: March 5, 2025
Abstract
Yes‐associated
protein
(YAP),
a
pivotal
of
the
Hippo
signaling
pathway,
plays
crucial
role
in
regulating
cell
proliferation
and
differentiation.
Emerging
evidence
highlights
its
significance
respiratory
inflammatory
disorders,
including
chronic
rhinosinusitis,
allergic
rhinitis.
This
review
delves
into
impact
YAP
on
individuals
affected
by
these
ailments,
with
specific
focus
it
nasal
mucosal
epithelial
cells.
We
further
explore
interplay
between
mediators,
outlining
pathological
mechanisms
through
which
contributes
to
tissue
restructuring
contexts.
Despite
advancements,
gaps
persist
understanding
YAP's
broader
clinical
applications.
Future
research
directions
are
proposed
this
article
bridge
knowledge
gaps.
Language: Английский
The Role of Yes‐Associated Protein in Inflammatory Diseases and Cancer
Bing Zhong,
No information about this author
Jintao Du,
No information about this author
Feng Liu
No information about this author
et al.
MedComm,
Journal Year:
2025,
Volume and Issue:
6(3)
Published: March 1, 2025
Yes-associated
protein
(YAP)
plays
a
central
role
in
the
Hippo
pathway,
primarily
governing
cell
proliferation,
differentiation,
and
apoptosis.
Its
significance
extends
to
tumorigenesis
inflammatory
conditions,
impacting
disease
initiation
progression.
Given
increasing
relevance
of
YAP
disorders
cancer,
this
study
aims
elucidate
its
pathological
regulatory
functions
these
contexts.
Specifically,
we
aim
investigate
involvement
molecular
mechanisms
various
diseases
cancers.
We
particularly
focus
on
how
activation,
whether
through
Hippo-dependent
or
independent
pathways,
triggers
release
inflammation
mediators
respiratory,
cardiovascular,
digestive
conditions.
In
not
only
promotes
tumor
proliferation
differentiation
but
also
modulates
immune
microenvironment,
thereby
fostering
metastasis
Additionally,
provide
an
overview
current
YAP-targeted
therapies.
By
emphasizing
YAP's
enhance
our
understanding
protein's
pivotal
processes,
intricate
related
diseases,
contribute
future
drug
development
strategies
targeting
YAP.
Language: Английский
Upper respiratory microbial communities of healthy populations are shaped by niche and age
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: April 14, 2024
Alterations
in
upper
respiratory
microbiomes
have
been
implicated
shaping
host
health
trajectories,
including
by
limiting
mucosal
pathogen
colonization.
However,
limited
comparative
studies
of
microbiome
development
and
functioning
across
age
groups
performed.
Herein,
we
perform
shotgun
metagenomic
sequencing
paired
with
inhibition
assays
to
elucidate
differences
nasal
oral
composition
healthy
24-month-old
infant
(n=229)
adult
(n=100)
populations.
Language: Английский
Yokenella regensburgei—Past, Present and Future
Antibiotics,
Journal Year:
2024,
Volume and Issue:
13(7), P. 589 - 589
Published: June 26, 2024
is
a
Gram-negative
rod
part
of
the
Language: Английский
Nasal microbiome dynamics: decoding the intricate nexus in the progression of respiratory and neurological diseases
Keerti Maheshwari,
No information about this author
R. Gupta,
No information about this author
Ruchika Sharma
No information about this author
et al.
Critical Reviews in Microbiology,
Journal Year:
2024,
Volume and Issue:
unknown, P. 1 - 16
Published: Aug. 19, 2024
In
recent
times,
the
nasal
region
has
emerged
as
a
distinctive
and
dynamic
environment
where
myriad
of
microbial
communities
establish
residence
from
infancy,
persisting
both
commensal
opportunistic
pathogens
throughout
lifespan.
Understanding
coexistence
microorganisms
in
respiratory
mucosal
layers,
their
potential
for
infections,
underlying
molecular
mechanisms
shaping
these
interactions
is
crucial
developing
efficient
diagnostic
therapeutic
interventions
against
neurodegenerative
diseases.
Despite
significant
strides
understanding
olfactory
system's
nexus
with
microbiota,
comprehensive
correlations
neurological
diseases
still
need
to
be
discovered.
The
microbiome,
sentinel
immune
defense,
orchestrates
delicate
equilibrium
that,
when
disrupted,
can
precipitate
severe
including
Chronic
Rhinosinusitis,
obstructive
pulmonary
disorder
(COPD),
Asthma,
instigate
cascade
effect
on
central
nervous
system
such
Alzheimer's
disease
(AD),
Parkinson's
(PD),
Multiple
sclerosis
(MS).
This
review
aims
redress
this
imbalance
by
meticulously
exploring
anatomical
microbiological
nuances
surface
health
disease.
By
delineating
intricacies
interactions,
unravels
that
govern
intricate
between
microbiota
dysbiosis,
dysfunction,
progression
Language: Английский
Upper respiratory microbial communities of healthy populations are shaped by niche and age
Microbiome,
Journal Year:
2024,
Volume and Issue:
12(1)
Published: Oct. 18, 2024
Alterations
in
upper
respiratory
microbiomes
have
been
implicated
shaping
host
health
trajectories,
including
by
limiting
mucosal
pathogen
colonization.
However,
limited
comparative
studies
of
microbiome
development
and
functioning
across
age
groups
performed.
Herein,
we
perform
shotgun
metagenomic
sequencing
paired
with
inhibition
assays
to
elucidate
differences
nasal
oral
composition
intermicrobial
interactions
healthy
24-month-old
infant
(n
=
229)
adult
100)
populations.
We
find
that
beta
diversity
varies
age,
showing
greater
population-level
variation
compared
microbiomes.
Infant
alpha
was
significantly
lower
samples
higher
samples,
relative
adults.
Accordingly,
demonstrate
significant
genus-
species-level
between
sites
groups.
Antimicrobial
resistome
patterns
likewise
varied
body
sites,
resistance
gene
abundance
Biosynthetic
clusters
encoding
specialized
metabolite
production
were
found
microbiomes,
Investigation
revealed
gram-negative
gram-positive
bacteria
commensals,
while
isolates
had
antifungal
activity.
In
summary,
identify
the
microbial
communities
inhabiting
cavities
infants
These
findings
inform
our
understanding
impacting
functions
related
colonization
resistance,
important
implications
for
lifespan.
Language: Английский
The host genotype actively shapes its microbiome across generations
Laurentiu Benga,
No information about this author
Anna Rehm,
No information about this author
Christina Gougoula
No information about this author
et al.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: March 15, 2024
Abstract
Background
The
microbiome
greatly
affects
health
and
wellbeing.
Evolutionarily,
it
is
doubtful
that
a
host
would
rely
on
chance
alone
to
pass
microbial
colonization
its
offspring.
However,
the
literature
currently
offers
only
limited
evidence
regarding
two
alternative
hypotheses:
active
shaping
by
genetic
factors
or
transmission
of
maternal
legacy.
Results
To
further
dissect
influence
genetics
inheritance,
we
collected
2-cell
stage
embryos
from
representative
wildtypes,
C57BL6/J
BALB/c,
transferred
mixture
both
genotype
into
hybrid
recipient
mice
be
inoculated
an
identical
at
birth.
Conclusions
Observing
offspring
for
six
generations
unequivocally
emphasizes
impact
over
legacy
in
constant
environments,
akin
murine
laboratory
experiments.
Interestingly,
solely
controlled
first
generation.
current
supporting
has
not
extended
beyond
this
initial
generation,
resolving
aforementioned
debate.
graphical
abstract
Language: Английский
Impact of microplastics, fluoride, and mancozeb on tomato plant growth and rhizosphere microbial dynamics: A metagenomic analysis
Ajay Kumar,
No information about this author
Rajni Sharma,
No information about this author
Muskan Bokolia
No information about this author
et al.
Pedosphere,
Journal Year:
2024,
Volume and Issue:
unknown
Published: Sept. 1, 2024
Language: Английский
The host genotype actively shapes its microbiome across generations in laboratory mice
Laurentiu Benga,
No information about this author
Anna Rehm,
No information about this author
Christina Gougoula
No information about this author
et al.
Microbiome,
Journal Year:
2024,
Volume and Issue:
12(1)
Published: Dec. 5, 2024
Abstract
Background
The
microbiome
greatly
affects
health
and
wellbeing.
Evolutionarily,
it
is
doubtful
that
a
host
would
rely
on
chance
alone
to
pass
microbial
colonization
its
offspring.
However,
the
literature
currently
offers
only
limited
evidence
regarding
two
alternative
hypotheses:
active
shaping
by
genetic
factors
or
transmission
of
maternal
legacy.
Results
To
further
dissect
influence
genetics
inheritance,
we
collected
two-cell
stage
embryos
from
representative
wild
types,
C57BL6/J
BALB/c,
transferred
mixture
both
genotype
into
hybrid
recipient
mice
be
inoculated
an
identical
at
birth.
Conclusions
Observing
offspring
for
six
generations
unequivocally
emphasizes
impact
over
legacy
in
constant
environments,
akin
murine
laboratory
experiments.
Interestingly,
solely
controlled
first
generation.
current
supporting
has
not
extended
beyond
this
initial
generation,
resolving
aforementioned
debate.
Graphical
Language: Английский