bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: June 17, 2024
Hydrodynamic
coordination
of
cilia
is
ubiquitous
in
biology.
It
commonly
modeled
using
the
steady
Stokes
equations.
The
flow
around
ciliated
cells,
however,
exhibits
finite
time
vorticity
diffusion,
requiring
a
dynamical
description.
We
present
model
elastic
coupled
by
transient
viscous
bulk
fluid.
Therein,
diffusion
impacts
qualitatively
and
quantitatively.
In
particular,
pairs
synchronize
antiphase
for
long
times.
Moreover,
metachronal
waves
occur
chains
larger
than
penetration
depth,
whereas
global
synchronization
occurs
flow.
Nature Communications,
Journal Year:
2025,
Volume and Issue:
16(1)
Published: March 11, 2025
Mucociliary
clearance
is
a
vital
defense
mechanism
of
the
human
airways,
protecting
against
harmful
particles
and
infections.
When
this
process
fails,
it
contributes
to
respiratory
diseases
like
chronic
obstructive
pulmonary
disease
(COPD)
asthma.
While
advances
in
single-cell
transcriptomics
have
revealed
complexity
airway
composition,
much
what
we
know
about
how
structure
impacts
relies
on
animal
studies.
This
limits
our
ability
create
accurate
human-based
models
diseases.
Here
show
that
airways
female
rats
humans
exhibit
species-specific
differences
distribution
ciliated
secretory
cells
as
well
ciliary
beat,
resulting
significantly
higher
effectiveness
humans.
We
further
reveal
standard
lab-grown
cultures
lower
compared
identify
underlying
structural
differences.
By
combining
diverse
experiments
physics-based
modeling,
establish
universal
benchmarks
assess
function,
interpret
preclinical
models,
better
understand
disease-specific
impairments
mucociliary
clearance.
crucial
for
but
its
structure-function
relationships
are
not
fully
understood.
Here,
authors
epithelial
by
mapping
cilia
distribution,
comparing
rat
developing
quantitative
function.
Motile
cilia
are
hair-like
cell
extensions
that
beat
periodically
to
generate
fluid
flow
along
various
epithelial
tissues
within
the
body.
In
dense
multiciliated
carpets,
were
shown
exhibit
a
remarkable
coordination
of
their
in
form
traveling
metachronal
waves,
phenomenon
which
supposedly
enhances
transport.
Yet,
how
coordinate
regular
epithelia
move
fluids
remains
insufficiently
understood,
particularly
due
lack
rigorous
quantification.
We
combine
experiments,
novel
analysis
tools,
and
theory
address
this
knowledge
gap.
To
investigate
collective
dynamics
cilia,
we
studied
zebrafish
nose
brain.
focused
mainly
on
nose,
its
conserved
properties
with
other
ciliated
superior
accessibility
for
non-invasive
imaging.
revealed
synchronized
only
locally
size
local
synchronization
domains
increases
viscosity
surrounding
medium.
Even
though
is
only,
observed
global
patterns
waves
across
epithelium.
Intriguingly,
these
wave
direction
individual
fish,
but
different
left
right
noses,
unveiling
chiral
asymmetry
coordination.
understand
implications
pumping,
used
computational
model
array
cilia.
found
prevents
steric
collisions,
i.e.,
colliding
each
other,
improves
pumping
hardly
affects
flow.
conclusion,
show
together
tissue-scale
alignment
coincide
epithelia,
enhance
physiological
function
pumping.
Proceedings of the National Academy of Sciences,
Journal Year:
2023,
Volume and Issue:
120(40)
Published: Sept. 27, 2023
Motile
cilia
beat
in
an
asymmetric
fashion
order
to
propel
the
surrounding
fluid.
When
many
are
located
on
a
surface,
their
beating
can
synchronize
such
that
phases
form
metachronal
waves.
Here,
we
computationally
study
model
where
each
cilium
is
represented
as
spherical
particle,
moving
along
tilted
trajectory
with
position-dependent
active
driving
force
and
internal
drag
coefficient.
The
thus
takes
into
account
all
essential
broken
symmetries
of
ciliary
beat.
We
show
taking
near-field
hydrodynamic
interactions,
effective
coupling
between
even
over
entire
cycle
become
nonreciprocal:
phase
more
strongly
affected
by
adjacent
one
side
than
at
same
distance
opposite
direction.
As
result,
synchronization
starts
from
seed
edge
group
propagates
rapidly
across
system,
leading
time
scales
proportionally
linear
dimension
system.
carpet
characterized
three
different
velocities:
velocity
fluid
transport,
waves,
propagation.
Unlike
systems
reciprocal
coupling,
boundary
effects
not
detrimental
for
synchronization,
but
rather
enable
formation
initial
seed.
Physical Review Letters,
Journal Year:
2024,
Volume and Issue:
132(20)
Published: May 16, 2024
Many
eukaryotic
microorganisms
propelled
by
multiple
flagella
can
swim
very
rapidly
with
distinct
gaits.
Here,
we
model
a
three-dimensional
mutiflagellate
swimmer,
resembling
the
microalgae.
When
are
actuated
synchronously,
swimming
efficiency
be
enhanced
or
reduced
interflagella
hydrodynamic
interactions
(HIs),
determined
intrinsic
tilting
angle
of
flagella.
The
asynchronous
gait
phase
difference
between
neighboring
reduce
oscillatory
motion
via
basal
mechanical
coupling.
In
presence
spherical
body,
simulations
taking
into
account
flagella-body
reveal
advantage
anterior
configuration
compared
posterior
configuration,
where
in
latter
case
an
optimal
number
arises.
Apart
from
understanding
role
HIs
multiflagellate
microorganisms,
this
work
could
also
guide
laboratory
fabrications
novel
microswimmers.
Physical review. E,
Journal Year:
2024,
Volume and Issue:
109(5)
Published: May 16, 2024
A
model
for
coordinated
motion
of
cilia
is
examined
in
this
work.
In
model,
wave
dynamics
are
represented
by
motions
microspheres
elastically
bound
to
circular
orbits
that
inclined
with
respect
a
no-slip
surface.
Parameters
explored
analytical
studies
and
simulations.
The
authors
demonstrate
traveling
waves
whose
direction
may
be
tuned
the
elasticity.
Physical Review Research,
Journal Year:
2025,
Volume and Issue:
7(1)
Published: Feb. 6, 2025
Hydrodynamic
coordination
of
cilia
is
ubiquitous
in
biology.
It
commonly
modeled
using
the
steady
Stokes
equations.
The
flow
around
ciliated
cells,
however,
exhibits
finite-time
vorticity
diffusion,
requiring
a
dynamical
description.
We
present
model
elastic
coupled
by
unsteady
viscous
bulk
fluid.
Therein,
diffusion
impacts
qualitatively
and
quantitatively.
In
particular,
pairs
synchronize
antiphase
for
long
times.
Moreover,
metachronal
waves
occur
chains
larger
than
penetration
depth,
whereas
global
synchronization
occurs
flow.
Published
American
Physical
Society
2025
Physical Review Research,
Journal Year:
2025,
Volume and Issue:
7(1)
Published: Feb. 12, 2025
In
Earth's
aquatic
environments
and
the
human
body,
microbial
swimmers
often
accumulate
at
interfaces
within
layered
systems,
forming
colonies
known
as
.
These
bioactive
layers
enhance
mass
transport
diffusion
in
fluid
media.
Here
we
study
hydrodynamic
behavior
induced
by
confined
semi-infinite
layers,
such
one
found
sea
surface
microlayer.
By
deriving
analytical
expressions
performing
numerical
simulations,
explore
how
geometrical
viscous
confinement
(layer
thickness
viscosity
ratio)
influence
fluctuations
passive
tracer
dynamics.
Our
findings
reveal
anisotropic
distributions
of
fluctuations,
characterized
three
distinct
regions:
near
fluid-fluid
interface
(Region
I),
vertical
dominate;
an
intermediate
region
II),
become
isotropic;
free
III),
horizontal
prevail.
The
results
also
demonstrate
emergence
coherent
vortical
structures
highly
with
roll-like
patterns
governed
layer
sharpness
transitions.
insights
provided
this
work
have
implications
for
understanding
biogenic
flow
processes
natural
engineered
environments,
offering
potential
applications
areas
ecology,
biofilm
management,
microfluidic
technologies.
Published
American
Physical
Society
2025