Frontiers in Microbiology,
Journal Year:
2022,
Volume and Issue:
13
Published: April 7, 2022
Temperature
strongly
influences
microbial
community
structure
and
function,
in
turn
contributing
to
global
carbon
cycling
that
can
fuel
further
warming.
Recent
studies
suggest
biotic
interactions
among
microbes
may
play
an
important
role
determining
the
temperature
responses
of
these
communities.
However,
how
predation
regulates
microbiomes
under
future
climates
is
still
poorly
understood.
Here,
we
assess
whether
by
a
key
bacterial
consumer—protists—influences
response
function
freshwater
microbiome.
To
do
so,
exposed
communities
two
cosmopolitan
protist
species—
Tetrahymena
thermophila
Colpidium
sp.—at
different
temperatures,
month-long
microcosm
experiment.
While
biomass
respiration
increased
with
due
shifts,
changed
over
time
presence
protists.
Protists
influenced
rate
through
direct
indirect
effects
on
structure,
predator
actually
reduced
at
elevated
temperature.
Indicator
species
analyses
showed
were
mostly
determined
phylum-specific
density
cell
size.
Our
study
supports
previous
findings
driver
but
also
demonstrates
large
mediate
Ecology Letters,
Journal Year:
2024,
Volume and Issue:
27(1)
Published: Jan. 1, 2024
Global
change
is
rapidly
and
fundamentally
altering
many
of
the
processes
regulating
flux
energy
throughout
ecosystems,
although
researchers
now
understand
effect
temperature
on
key
rates
(such
as
aquatic
primary
productivity),
theoretical
foundation
needed
to
generate
forecasts
biomass
dynamics
extinction
risk
remains
underdeveloped.
We
develop
new
theory
that
describes
interconnected
effects
nutrients
phytoplankton
populations
show
thermal
response
equilibrium
(i.e.
carrying
capacity)
always
peaks
at
a
lower
than
for
productivity
growth
rate).
This
mismatch
driven
by
differences
in
responses
growth,
death,
per-capita
impact
nutrient
pool,
making
our
results
highly
general
applicable
widely
used
population
models
beyond
phytoplankton.
further
non-equilibrium
depend
pace
environmental
relative
underlying
vital
respond
variable
environments
differently
high
versus
low
temperatures
due
asymmetries.
Ecology,
Journal Year:
2019,
Volume and Issue:
100(11)
Published: July 22, 2019
Abstract
Nutrient
availability
and
temperature
are
important
drivers
of
phytoplankton
growth
stoichiometry.
However,
the
interactive
effects
nutrients
on
have
been
analyzed
mostly
by
addressing
changes
in
average
temperature,
whereas
recent
evidence
suggests
an
role
fluctuations.
In
a
laboratory
experiment,
we
grew
natural
community
under
fluctuating
constant
regimes
across
25
combinations
nitrogen
(N)
phosphorus
(P)
supply.
Temperature
fluctuations
decreased
rate
(
r
max
),
as
predicted
nonlinear
averaging
along
temperature–growth
relationship.
increased
with
increasing
P
supply,
significant
×
N
interaction
reflected
that
shape
thermal
reaction
norm
depended
nutrients.
By
contrast,
carrying
capacity
supply
rather
than
temperature.
Higher
N:P
ratios
showed
affected
cellular
nutrient
incorporation.
Minor
differences
species
diversity
composition
existed.
Our
results
suggest
variability
interacts
to
affect
physiology
stoichiometry
at
level.
Ecosphere,
Journal Year:
2020,
Volume and Issue:
11(4)
Published: April 1, 2020
Abstract
Describing
how
resource
consumption
rates
depend
on
density,
conventionally
termed
“functional
responses,”
is
crucial
to
understanding
the
population
dynamics
of
trophically
interacting
organisms.
Yet,
accurately
determining
functional
response
for
any
given
pair
predator
and
prey
remains
a
challenge.
Moreover,
responses
are
potentially
complex
surfaces
in
multidimensional
space,
where
density
only
one
several
factors
rates.
We
explored
three
sources
error
can
be
addressed
design
statistical
analysis
experiments:
ill‐chosen
spacing
densities,
heteroscedastic
variance
rates,
non‐independence
parameters
function
describing
relation
additional
environmental
factors.
generated
extensive,
virtual
data
sets
that
simulated
feeding
experiments
which
both
temperature
were
varied,
true,
deterministic
surface
was
known
realistic
had
been
added.
compared
eight
different
methods
fitting,
stood
out
as
best
performing.
subsequently
tested
conclusions
from
simulation
study
against
experimental
zooplankton
algae
across
broad
range
temperatures.
summarize
our
main
findings
practice
guidelines
estimation
surfaces,
second
most
important:
(1)
space
densities
logarithmically,
starting
very
low
densities;
(2)
log‐transform
prior
fitting;
(3)
fit
multivariate
all
(including
other
factors,
case
temperature)
single
step.
also
observed
fitted
more
precisely
than
their
component
parameters.
The
latter
occurred
because
parameter
estimates
non‐independent,
an
inevitable
feature
fitting
nonlinear
functions
data:
A
often
described
with
near‐equal
accuracy
by
multiple
combinations.
therefore
conclude
models
perform
better
at
optimizing
overall
parameters,
such
attack
rate
or
handling
time,
temperature.
Environmental Microbiology,
Journal Year:
2019,
Volume and Issue:
21(12), P. 4706 - 4723
Published: Oct. 1, 2019
Summary
High
temperatures
(e.g.,
fever)
and
gut
microbiota
can
both
influence
host
resistance
to
infection.
However,
effects
of
temperature‐driven
changes
in
on
parasites
remain
unexplored.
We
examined
the
temperature
dependence
infection
bacterial
communities
bumble
bees
infected
with
trypanosomatid
parasite
Crithidia
bombi
.
Infection
intensity
decreased
by
over
80%
between
21
37°C.
Temperatures
peak
were
lower
than
predicted
based
growth
vitro
,
consistent
mismatches
thermal
performance
curves
hosts,
symbionts.
Gut
community
size
composition
exhibited
slight
but
significant,
non‐linear,
taxon‐specific
responses
temperature.
Abundance
total
bacteria
Orbaceae,
negatively
correlated
previous
studies,
positively
here.
Prevalence
bee
pathogen‐containing
family
Enterobacteriaceae
declined
temperature,
suggesting
that
high
may
confer
protection
against
diverse
pathogens.
Our
results
indicate
reflects
not
only
performance,
also
temperature‐dependent
activity
bacteria.
The
ecology
parasite‐symbiont
interactions
be
broadly
relevant
infectious
disease,
ectothermic
organisms
inhabit
changing
climates,
endotherms
exhibit
fever‐based
immunity.
Ecology Letters,
Journal Year:
2022,
Volume and Issue:
25(9), P. 1974 - 1985
Published: July 13, 2022
The
potential
for
forecasting
the
dynamics
of
ecological
systems
is
currently
unclear,
with
contrasting
opinions
regarding
its
feasibility
due
to
complexity.
To
investigate
forecast
skill
within
and
across
systems,
we
monitored
a
microbial
system
exposed
either
constant
or
fluctuating
temperatures
in
5-month-long
laboratory
experiment.
We
tested
how
species
abundances
depends
on
number
strength
interactions
model
size
(number
predictors).
also
greater
complexity
(i.e.
temperatures)
impacted
these
relations.
found
that
more
had,
weaker
were
better
abundance
was
predicted.
Forecast
increased
size.
Greater
decreased
three
out
eight
species.
These
insights
into
prediction
connectedness
overall
could
improve
monitoring.
Limnology and Oceanography Methods,
Journal Year:
2022,
Volume and Issue:
20(7), P. 400 - 427
Published: June 11, 2022
Abstract
Accurate
and
detailed
reporting
of
methods
is
essential
for
scientific
progress,
yet
it
widely
accepted
that
authors
across
all
fields
tend
to
provide
insufficient
detail.
Given
the
recent
proliferation
automated
semi‐automated
technologies
data
collection,
address
this
widespread
issue
details
needed
interpretation
reproducibility
each
specific
technique
first
need
be
identified.
A
systematic
literature
review
assessed
comprehensiveness
method
reported
by
116
peer‐reviewed
studies
published
between
2017
2020
using
FlowCam
(a
used
imaging
flow
cytometer)
image
phytoplankton,
finding
lacking
in
critical
details,
inhibiting
reproducibility,
limiting
veracity
some
findings.
Through
three
case
studies,
we
identify
several
key
should
ensure
their
findings
are
credible,
comparable,
replicable
illustrate
wide‐reaching
implications
not
doing
so.
Future
phytoplankton
analyses
clear
relevant
relating
unit,
sample
preparation,
run
settings,
post‐processing
images,
considered
use
only
verified
measurement
outputs.
template
presented
as
a
guideline
intended
enhance
quality,
interpretability,
repeatability
future
papers.
The
pervasiveness
inadequacies
identified
here
highlights
how
vital
users
any
or
have
understanding
impact
on
findings,
report
these
adequately.
Biological Conservation,
Journal Year:
2023,
Volume and Issue:
281, P. 110003 - 110003
Published: March 29, 2023
Overfishing,
habitat
loss,
and
climate
change
are
driving
population
declines
in
many
species.
Understanding
a
species'
capacity
to
recover
from
these
other
threats
is
necessary
for
prioritising
management.
The
maximum
intrinsic
rate
of
increase
(rmax)
can
be
used
compare
which
species
or
groups
particularly
sensitive
ongoing
threats.
To
investigate
global
patterns
sensitivity
rays
skates
(superorder
Batoidea),
we
calculated
rmax
85
using
modified
Euler-Lotka
model
that
accounts
survival
maturity.
We
examined
how
varies
with
body
mass,
temperature,
depth
an
information-theoretic
approach
through
selection,
accounting
phylogenetic
non-independence.
Although
observed
overall
positive
relationship
between
found
warm,
shallow-water
were
more
intrinsically
exploitation
(lower
rmax)
than
cold,
deep-water
(higher
rmax).
hypothesise
this
pattern
likely
driven
by
their
different
reproductive
strategies
as
live-bearing
have
fewer
offspring
compared
egg-laying
skates,
caution
future
research
should
focus
on
understanding
differences
the
mortality
schedule
juveniles
sub-adults
understand
if
maturity
comparable.
Our
findings
highlight
high
vulnerability
ray
overexploitation
due
low
growth
rates.
These
conservation
implications
our
geographic
extinction
risk,
suggesting
tropical
sensitive.
Ecology and Evolution,
Journal Year:
2023,
Volume and Issue:
13(1)
Published: Jan. 1, 2023
Biomass
dynamics
capture
information
on
population
and
ecosystem-level
processes
(e.g.,
changes
in
production
over
time).
Understanding
how
rising
temperatures
associated
with
global
climate
change
influence
biomass
is
thus
a
pressing
issue
ecology.
The
total
of
species
depends
its
density
average
mass.
Consequently,
disentangling
responds
to
increasingly
warm
variable
ultimately
understanding
temperature
influences
both
mass
dynamics.
Here,
we
address
this
by
keeping
track
experimental
microbial
populations
growing
carrying
capacity
for
15
days
at
two
different
temperatures,
the
presence
absence
variability.
We
develop
simple
mathematical
expression
partition
contribution
assess
responses
either
one
shifts.
Moreover,
use
time-series
analysis
(Convergent
Cross
Mapping)
variability
reciprocal
effects
vice
versa.
show
that
through
dynamics,
which
have
opposite
can
offset
each
other.
also
biomass,
but
effect
independent
any
or
Last,
shift
significantly
across
regimes,
suggesting
rapid
environment-dependent
eco-phenotypic
underlie
responses.
Overall,
our
results
connect
phenotypic
explain
shedding
light
play
cosmopolitan
abundant
microbes
as
world
experiences
temperatures.
Ecology,
Journal Year:
2024,
Volume and Issue:
105(5)
Published: April 5, 2024
Abstract
Climate
warming
is
predicted
to
increase
mean
temperatures
and
thermal
extremes
on
a
global
scale.
Because
their
body
temperature
depends
the
environmental
temperature,
ectotherms
bear
full
brunt
of
climate
warming.
Predicting
impact
ectotherm
diversity
distributions
requires
framework
that
can
translate
effects
life‐history
traits
into
population‐
community‐level
outcomes.
Here
we
present
mechanistic
theoretical
predict
fundamental
niche
envelope
species
based
how
affects
underlying
traits.
The
advantage
this
twofold.
First,
it
phenotypic
individual
organisms
population‐level
patterns
observed
in
nature.
Second,
niches
envelopes
solely
trait
response
data
and,
hence,
completely
independently
any
information.
We
find
at
which
intrinsic
growth
rate
maximized
exceeds
abundance
under
density‐dependent
growth.
As
result,
will
fastest
when
rare
lower
than
recover
from
perturbation
abundant.
test
model
predictions
using
naturalized–invasive
interaction
identify
invasive
most
easily
invade
naturalized's
habitat
naturalized
likely
resist
invasive.
sufficiently
yield
reliable
for
broad
apply
across
range
ectothermic
taxa.
This
ability
before
encounters
new
environment
essential
mitigating
some
major
change
populations
around
globe.