Food Webs and Feedbacks: The Untold Ecological Relevance of Antimicrobial Resistance as Seen in Harmful Algal Blooms DOI Creative Commons
Aabir Banerji, Nichole E. Brinkman, Benjamin C. Davis

et al.

Microorganisms, Journal Year: 2024, Volume and Issue: 12(11), P. 2121 - 2121

Published: Oct. 23, 2024

Antimicrobial resistance (AMR) has long been framed as an epidemiological and public health concern. Its impacts on the environment are unclear. Yet, basis for AMR is altered cell physiology. Just this affects how microbes interact with antimicrobials, it can also affect they their own species, other non-living environment. Moreover, if globally notorious causing landscape-level environmental issues, then these effects could alter biodiversity ecosystem function a grand scale. To investigate possibilities, we compiled peer-reviewed literature from past 20 years regarding in toxic freshwater cyanobacterial harmful algal blooms (HABs). We examined evidence of affecting HAB frequency, severity, or persistence. Although no study within our scope was explicitly designed to address question, multiple studies reported AMR-associated changes HAB-forming cyanobacteria (and co-occurring microbes) that pertained directly timing, toxicity, phase, well dynamics HAB-afflicted aquatic food webs. These findings highlight potential have far-reaching (including loss function) bring into focus importance confronting complex interrelated issues such HABs concert, interdisciplinary tools perspectives.

Language: Английский

Genomics of Acinetobacter baumannii iron uptake DOI Creative Commons
Irene Artuso,

Harsh Poddar,

Benjamin A. Evans

et al.

Microbial Genomics, Journal Year: 2023, Volume and Issue: 9(8)

Published: Aug. 7, 2023

Iron is essential for growth in most bacteria due to its redox activity and role metabolic reactions; it a cofactor many bacterial enzymes. The bacterium Acinetobacter baumannii multidrug-resistant nosocomial pathogen. A. responds low iron availability imposed by the host through exploitation of multiple iron-acquisition strategies, which are likely deliver cell under variety environmental conditions, including human animal infection. To date, six different gene clusters active uptake have been described , encoding protein systems involved (i) ferrous ( feo ); (ii) haem hemT hemO (iii) synthesis transport baumannoferrin(s) bfn ), acinetobactin bas / bau ) fimsbactin(s) fbs siderophores. Here we describe structure, distribution phylogeny iron-uptake among >1000 genotypically diverse isolates, showing that very prevalent across dataset, whereas additional haem-uptake system only present portion dataset cluster rare. Since expression can be linked virulence, presence may contributed success some clones.

Language: Английский

Citations

16

Bioelectrochemical remediation of soil antibiotic and antibiotic resistance gene pollution: Key factors and solution strategies DOI
Ke Zhao,

Shenghe Liu,

Yimeng Feng

et al.

The Science of The Total Environment, Journal Year: 2024, Volume and Issue: 947, P. 174517 - 174517

Published: July 6, 2024

Language: Английский

Citations

6

The Efficient Remediation and Community Assembly of Co-Contaminated Agricultural Soils Under Cold Stress Using Immobilized Bacterial Agents: A Perspective Based on Abundance Differences DOI

Zijun Ni,

Xiaorong Zhang,

Xuan Gong

et al.

Published: Jan. 1, 2025

Language: Английский

Citations

0

Leveraging the microbiome to combat antibiotic resistant gynecological infections DOI Creative Commons

Tanya Kumar,

Aryak Rekhi,

Yumie Lee

et al.

npj Antimicrobials and Resistance, Journal Year: 2025, Volume and Issue: 3(1)

Published: April 23, 2025

Abstract The vaginal resistome can be considered a collection of the resistant determinants in microbiome. Here we review including microbes and genes harbored common gynecological infections, that participate horizontal gene transfer, host factors contribute to resistome, therapies. Finally, provide perspective on technologies leveraged study remaining challenges.

Language: Английский

Citations

0

Unraveling the tempo and mode of horizontal gene transfer in bacteria DOI Creative Commons
Benjamin H. Good, Ami S. Bhatt, Michael J. McDonald

et al.

Trends in Microbiology, Journal Year: 2025, Volume and Issue: unknown

Published: April 1, 2025

Language: Английский

Citations

0

Enhanced Remediation of Co-contaminated Agricultural Soils under Cold Stress by Immobilized Bacterial Agents: A Perspective Based on Abundance Differences DOI

Zijun Ni,

Xiaorong Zhang,

Xuan Gong

et al.

Journal of Hazardous Materials, Journal Year: 2025, Volume and Issue: 494, P. 138552 - 138552

Published: May 9, 2025

Language: Английский

Citations

0

Delineating the Acquired Genetic Diversity and Multidrug Resistance in Alcaligenes from Poultry Farms and Nearby Soil DOI
Abhilash Bhattacharjee,

Anil Kumar Singh

The Journal of Microbiology, Journal Year: 2024, Volume and Issue: 62(7), P. 511 - 523

Published: June 21, 2024

Language: Английский

Citations

1

Genome evolution following an ecological shift in nectar-dwelling Acinetobacter DOI Creative Commons
Vivianna A. Sanchez, Tanya Renner, L. Baker

et al.

mSphere, Journal Year: 2024, Volume and Issue: unknown

Published: Dec. 26, 2024

ABSTRACT The bacterial genus Acinetobacter includes species found in environmental habitats like soil and water, as well taxa adapted to be host-associated or pathogenic. High genetic diversity may allow for this habitat flexibility, but the specific genes underlying switches between are poorly understood. One lineage of has undergone a substantial change by evolving from presumed soil-dwelling ancestral state thrive floral nectar. Here, we compared genomes floral-dwelling pollinator-associated , including newly described species, with relatives other environments determine genomic changes associated ecological shift. Following one evolutionary origin nectar adaptation, nectar-dwelling have reduction genome size experienced dynamic gene gains losses they diversified. Gene content suggest shift metabolism monosaccharides rather than diverse carbohydrates, scavenging nitrogen sources, which predict beneficial environments. appear result duplication events, divergence, horizontal transfer. Most notably, acquired ability degrade pectin plant pathogens, duplicated under selection within clade. We hypothesize that was key trait adaptation nectar, it could improve access nutrients nutritionally unbalanced These results identify traits coinciding dramatic switch IMPORTANCE Many bacteria, commonly evolve exploit new habitats. However, underlie often unknown. Floral is home specialized microbes can grow habitat. Several evolved become common abundant investigate adaptations required successfully colonize novel performed comparative genomics analyses environments, water. find although loss coincided living bacteria been particularly important change. gained degrading pectin, polysaccharide, their environment. findings shed light on how novelty evolves bacteria.

Language: Английский

Citations

1

Genome evolution following an ecological shift in nectar-dwellingAcinetobacter DOI Open Access
Vivianna A. Sanchez, Tanya Renner, L. Baker

et al.

bioRxiv (Cold Spring Harbor Laboratory), Journal Year: 2023, Volume and Issue: unknown

Published: Nov. 2, 2023

Abstract The bacterial genus Acinetobacter includes species found in environmental habitats like soil and water, as well adapted to be host-associated or pathogenic. High genetic diversity may allow for this habitat flexibility, but the specific genes underlying switches between are poorly understood. One lineage of has undergone a substantial change by evolving from presumed soil-dwelling ancestral state thrive floral nectar. Here we compared genomes floral-dwelling pollinator-associated , including newly described species, with relatives other environments determine genomic changes associated ecological shift. Following one evolutionary origin nectar adaptation, nectar-dwelling have reduction genome size experienced dynamic gene gains losses they diversified. We content carbohydrate metabolism nitrogen metabolism, which predict beneficial environments. Gene follow pattern consistent streamlining, whereas appear result both divergence horizontal transfer. Most notably, acquired ability degrade pectin plant pathogens duplicated under selection within clade. hypothesize that was key trait adaptation nectar, it could improve access nutrients nutritionally unbalanced These results identify traits coinciding dramatic switch

Language: Английский

Citations

1

Effects of Winter Warming on Bioremediation and Bacterial Community Characteristics in Soil Co-Contaminated with Antibiotics and Heavy Metals in Cold Regions DOI

Zijun Ni,

Xiaorong Zhang,

Chunyun Jia

et al.

Published: Jan. 1, 2024

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Language: Английский

Citations

0