Geoscientific model development,
Journal Year:
2012,
Volume and Issue:
5(5), P. 1195 - 1220
Published: Sept. 28, 2012
Abstract.
Earth
System
Climate
Models
(ESCMs)
are
valuable
tools
that
can
be
used
to
gain
a
better
understanding
of
the
climate
system,
global
biogeochemical
cycles
and
how
anthropogenically-driven
changes
may
affect
them.
Here
we
describe
improvements
made
marine
ecosystem
component
University
Victoria's
ESCM
(version
2.9).
Major
include
corrections
code
equations
describing
phytoplankton
light
limitation
zooplankton
grazing,
implementation
more
realistic
growth
grazing
model,
an
iron
scheme
constrain
growth.
The
new
model
is
evaluated
after
10
000-yr
spin-up
compared
both
previous
version
observations.
For
majority
tracers
processes
shows
significant
when
against
Many
due
simulation
seasonal
in
higher
latitude
ecosystems
effect
this
has
on
ocean
biogeochemistry.
This
improved
intended
provide
basic
component,
which
as
or
expanded
upon
(i.e.,
addition
tracers),
for
change
cycling
research.
Journal of Plankton Research,
Journal Year:
2009,
Volume and Issue:
32(1), P. 119 - 137
Published: Oct. 28, 2009
Global
increases
in
atmospheric
CO2
and
temperature
are
associated
with
changes
ocean
chemistry
circulation,
altering
light
nutrient
regimes.
Resulting
phytoplankton
community
structure
expected
to
have
a
cascading
effect
on
primary
export
production,
food
web
dynamics
the
of
marine
as
well
biogeochemical
cycling
carbon
bio-limiting
elements
sea.
A
review
current
literature
indicates
cell
size
elemental
stoichiometry
often
respond
predictably
abiotic
conditions
follow
biophysical
rules
that
link
environmental
growth
rates,
rates
interactions,
consequently
elements.
This
suggests
promising
ecophysiological
traits
for
modelling
tracking
response
climate
change.
In
turn,
these
further
impacts
through
yet
poorly
understood
secondary
processes
trophic
dynamics.
Science,
Journal Year:
2007,
Volume and Issue:
315(5820), P. 1843 - 1846
Published: March 30, 2007
A
marine
ecosystem
model
seeded
with
many
phytoplankton
types,
whose
physiological
traits
were
randomly
assigned
from
ranges
defined
by
field
and
laboratory
data,
generated
an
emergent
community
structure
biogeography
consistent
observed
global
distributions.
The
modeled
organisms
included
types
analogous
to
the
cyanobacterium
Prochlorococcus
.
Their
distributions
properties
simultaneously
correspond
observations.
This
flexible
representation
of
can
be
used
explore
relations
between
ecosystems,
biogeochemical
cycles,
climate
change.
Geoscientific model development,
Journal Year:
2015,
Volume and Issue:
8(8), P. 2465 - 2513
Published: Aug. 13, 2015
Abstract.
PISCES-v2
(Pelagic
Interactions
Scheme
for
Carbon
and
Ecosystem
Studies
volume
2)
is
a
biogeochemical
model
which
simulates
the
lower
trophic
levels
of
marine
ecosystems
(phytoplankton,
microzooplankton
mesozooplankton)
cycles
carbon
main
nutrients
(P,
N,
Fe,
Si).
The
intended
to
be
used
both
regional
global
configurations
at
high
or
low
spatial
resolutions
as
well
short-term
(seasonal,
interannual)
long-term
(climate
change,
paleoceanography)
analyses.
There
are
24
prognostic
variables
(tracers)
including
two
phytoplankton
compartments
(diatoms
nanophytoplankton),
zooplankton
size
classes
(microzooplankton
description
carbonate
chemistry.
Formulations
in
based
on
mixed
Monod–quota
formalism.
On
one
hand,
stoichiometry
C
/
N
P
fixed
growth
rate
limited
by
external
availability
Si.
other
iron
silicon
quotas
variable
internal
Fe.
Various
parameterizations
can
activated
PISCES-v2,
setting,
instance,
complexity
chemistry
particulate
organic
materials.
So
far,
has
been
coupled
Nucleus
European
Modelling
Ocean
(NEMO)
Regional
Modeling
System
(ROMS)
systems.
A
full
its
optional
functionalities
provided
here.
results
quasi-steady-state
simulation
presented
evaluated
against
diverse
observational
satellite-derived
data.
Finally,
some
new
tested
series
sensitivity
experiments.
Biological reviews/Biological reviews of the Cambridge Philosophical Society,
Journal Year:
2010,
Volume and Issue:
86(2), P. 311 - 339
Published: Aug. 15, 2010
Zooplankton
is
a
morphologically
and
taxonomically
diverse
group
includes
organisms
that
vary
in
size
by
many
orders
of
magnitude,
but
they
are
all
faced
with
the
common
problem
collecting
food
from
very
dilute
suspension.
In
order
to
maintain
viable
population
face
mortality,
zooplankton
ocean
have
clear
daily
volume
ambient
water
for
prey
particles
equivalent
about
106
times
their
own
body
volume.
While
most
size-specific
vital
rates
mortality
decline
size,
clearance
requirement
largely
size-independent
because
availability
also
declines
size.
There
limited
number
solutions
concentrating
sticky
medium:
passive
active
ambush
feeding;
feeding-current
feeding,
where
either
intercepted
directly,
retained
on
filter,
or
individually
perceived
extracted
feeding
current;
cruise
colonization
large
marine
snow
aggregates.
The
basic
mechanics
these
food-collection
mechanisms
described,
it
shown
efficiencies
inherently
different
each
becomes
less
efficient
increasing
Mechanisms
compensate
this
efficiency
including
inflation
structures
development
vision.
Each
mode
has
implications
beyond
terms
risk
encountering
predators
chance
meeting
mates,
partly
target
types
prey.
main
dichotomy
between
(inefficient)
motile
more
modes;
secondary
(efficient)
hovering
(less
efficient)
cruising
modes.
various
modes
traded
off
against
feeding-mode-dependent
metabolic
expenses,
predation
risks,
mating
chances.
optimality
strategies,
evaluated
as
ratio
gain
over
risk,
varies
environment,
may
explain
both
size-dependent
spatio-temporal
differences
distributions
well
other
aspects
biology
(mating
behaviour,
predator
defence
strategies).
Journal of Plankton Research,
Journal Year:
2012,
Volume and Issue:
35(1), P. 3 - 11
Published: Sept. 12, 2012
The
classic
portrayal
of
plankton
is
dominated
by
phytoplanktonic
primary
producers
and
zooplanktonic
secondary
producers.
In
reality,
many
if
not
most
traditionally
labelled
as
phytoplankton
or
microzooplankton
should
be
identified
mixotrophs,
contributing
to
both
production.
Mixotrophic
protists
(i.e.
single-celled
eukaryotes
that
perform
photosynthesis
graze
on
particles)
do
represent
a
minor
component
the
plankton,
some
form
inferior
representatives
past
evolution
protists;
they
major
extant
protist
one
which
could
become
more
dominant
with
climate
change.
implications
for
this
mistaken
identification,
incorrect
labelling
mixotrophs
"phytoplankton"
"microzooplankton",
are
great.
It
extends
from
(mis)use
photopigments
indicators
production
performed
strict
photoautotrophs
rather
than
also
(co)locating
mixotrophic
activity,
through
inadequacy
functional
type
descriptions
in
models
(noting
individual
organism
simple
sum
phototrophy
heterotrophy).
We
propose
mixotrophy
recognized
contributor
dynamics,
due
effort
expended
field
laboratory
studies,
no
longer
side-lined
conceptual
food
webs
mathematical
models.
Limnology and Oceanography,
Journal Year:
2010,
Volume and Issue:
55(3), P. 1353 - 1376
Published: April 13, 2010
Climate
change
will
alter
concurrently
many
environmental
factors
that
exert
control
over
oceanic
phytoplankton.
Recent
laboratory
culture
work,
shipboard
experiments,
and
field
surveys
reveal
remaining
unknowns
about
the
bottom‐up
controls
for
five
globally
important
algal
groups.
Increasing
uncertainties
exist,
respectively,
picocyanobacteria,
diatoms,
Phaeocystis
spp.,
N
2
‐fixing
cyanobacteria,
coccolithophores.
This
missing
information
current
hinder
progress
in
modeling
how
these
phytoplankton
be
influenced
by
climate
change.
A
review
of
conceptual
approaches
used
to
elucidate
relationship
between
dominance,
from
Margalef's
mandala
functional
traits,
uncovered
limitations
regarding
their
application
climate‐change
scenarios.
For
example,
previous
have
insufficient
scope
or
dimensions
take
into
account
confounding
effects
synergistic
antagonistic
interactions
multiple
variables.
new
approach
is
needed
considers
all
different
properties
altered
while
at
same
time
permitting
a
subset
most
significant
specific
group
isolated
evaluated
factorial
matrix
perturbation
experiments.
We
advocate
three
interlinked
approaches,
including
clusters
incorporate
(temperature,
CO
,
light,
nutrients,
trace
metals),
which
both
present‐day
floristics
By
carefully
linking
holistic
reductionist
experimental
design,
future
responses
open‐ocean
groups
complex,
rapidly
changing
environment
can
better
predicted.
Ecology Letters,
Journal Year:
2015,
Volume and Issue:
19(2), P. 133 - 142
Published: Nov. 26, 2015
Abstract
Understanding
the
mechanisms
that
determine
how
phytoplankton
adapt
to
warming
will
substantially
improve
realism
of
models
describing
ecological
and
biogeochemical
effects
climate
change.
Here,
we
quantify
evolution
elevated
thermal
tolerance
in
phytoplankton,
Chlorella
vulgaris
.
Initially,
population
growth
was
limited
at
higher
temperatures
because
respiration
more
sensitive
temperature
than
photosynthesis
meaning
less
carbon
available
for
growth.
Tolerance
high
evolved
after
≈
100
generations
via
greater
down‐regulation
relative
photosynthesis.
By
down‐regulating
respiration,
overcame
metabolic
constraint
imposed
by
sensitivity
efficiently
allocated
fixed
Rapid
carbon‐use
efficiency
provides
a
potentially
general
mechanism
adaptation
implies
evolutionary
responses
modify
cycles
hence
food
web
structure
function
under
warming.
Models
futures
ignore
would
usefully
be
revisited.
Frontiers in Marine Science,
Journal Year:
2019,
Volume and Issue:
6
Published: April 25, 2019
In
this
paper
we
review
on
the
technologies
available
to
make
globally
quantitative
observations
of
particles,
in
general,
and
plankton,
particular,
world
oceans,
for
sizes
varying
from
sub-micron
centimeters.
Some
these
have
been
years
while
others
only
recently
emerged.
Use
is
critical
improve
understanding
processes
that
control
abundances,
distributions
composition
provide
data
necessary
constrain
ecosystem
biogeochemical
models,
forecast
changes
marine
ecosystems
light
climate
change.
begin
by
providing
motivation
plankton
observations,
quantification
diversity
qualification
a
global
scale.
We
then
expand
state-of-the-art,
detailing
variety
relevant
(mostly)
mature
measurements,
including
bulk
measurements
pigment
composition,
uses
genomic,
optical,
acoustical
methods
analysis
using
particles
counters,
flow
cytometers
imaging
devices.
follow
highlighting
requirements
observing
system,
approach
achieve
it
associated
challenges.
conclude
with
ranked
action-item
recommendations
next
ten
move
towards
our
vision
holistic
ocean-wide
system.
Particularly,
suggest
demonstration
project
GO-SHIP
line
and/or
long-term
observation
site
there
ensuring
issues
methods,
tools,
analysis,
quality
assessment
curation
are
addressed
early
implementation.
Global
coordination
key
success
will
bring
new
insights
nutrient
regeneration,
ocean
production,
fisheries,
carbon
sequestration.