Geoscientific model development,
Journal Year:
2016,
Volume and Issue:
9(4), P. 1293 - 1339
Published: April 5, 2016
Abstract.
The
European
Regional
Seas
Ecosystem
Model
(ERSEM)
is
one
of
the
most
established
ecosystem
models
for
lower
trophic
levels
marine
food
web
in
scientific
literature.
Since
its
original
development
early
nineties
it
has
evolved
significantly
from
a
coastal
model
North
Sea
to
generic
tool
simulations
shelf
seas
global
ocean.
current
release
contains
all
essential
elements
pelagic
and
benthic
parts
ecosystem,
including
microbial
web,
carbonate
system,
calcification.
Its
distribution
accompanied
by
testing
framework
enabling
analysis
individual
model.
Here
we
provide
detailed
mathematical
description
ERSEM
components
along
with
case
studies
mesocosm-type
simulations,
water
column
implementations,
brief
example
full-scale
application
north-western
shelf.
Validation
against
situ
data
demonstrates
capability
represent
contrasting
environments.
Limnology and Oceanography,
Journal Year:
2015,
Volume and Issue:
61(1), P. 165 - 197
Published: Oct. 11, 2015
Anthropogenic
activities
are
altering
total
nutrient
loads
to
many
estuaries
and
freshwaters,
resulting
in
high
not
only
of
nitrogen
(N),
but
some
cases,
chemically
reduced
forms,
notably
.
Long
thought
be
the
preferred
form
N
for
phytoplankton
uptake,
may
actually
suppress
overall
growth
when
concentrations
sufficiently
high.
has
been
well
known
inhibitory
or
repressive
uptake
assimilation,
that
promote
vs.
repress
different
groups
under
conditions
understood.
Here,
we
review
metabolism
first
a
"generic"
eukaryotic
cell,
contrasting
metabolic
pathways
regulation
these
substrates
provided
individually
equivalent
conditions.
Then
interactions
described
both
together,
emphasizing
cellular
challenge
balancing
acquisition
with
photosynthetic
energy
balance
dynamic
environments.
Conditions
which
dissipatory
such
as
dissimilatory
/
reduction
photorespiration
lead
suppression
highlighted.
While
more
is
about
diatoms,
taxon-specific
differences
contribute
changes
community
composition
pool
presented.
These
relationships
have
important
implications
harmful
algal
blooms,
development
criteria
management,
modeling
by
phytoplankton,
particularly
where
eutrophication
increasing
redox
state
changing.
Annual Review of Marine Science,
Journal Year:
2014,
Volume and Issue:
7(1), P. 241 - 264
Published: July 25, 2014
Phytoplankton
size
structure
controls
the
trophic
organization
of
planktonic
communities
and
their
ability
to
export
biogenic
materials
toward
ocean's
interior.
Our
understanding
mechanisms
that
drive
variability
in
phytoplankton
has
been
shaped
by
assumption
pace
metabolism
decreases
allometrically
with
increasing
cell
size.
However,
recent
field
laboratory
evidence
indicates
biomass-specific
production
growth
rates
are
similar
both
small
large
cells
but
peak
at
intermediate
sizes.
The
maximum
nutrient
uptake
rate
scales
isometrically
volume
superisometrically
minimum
quota.
unimodal
scaling
arises
from
ataxonomic,
size-dependent
trade-off
processes
related
requirement,
acquisition,
use.
superior
intermediate-size
exploit
high
concentrations
explains
biomass
dominance
during
blooms.
Biogeographic
patterns
independent
temperature
driven
mainly
changes
resource
supply.
European Journal of Phycology,
Journal Year:
2014,
Volume and Issue:
49(1), P. 20 - 46
Published: Jan. 2, 2014
The
partitioning
of
organic
matter
(OM)
between
dissolved
and
particulate
phases
is
an
important
factor
in
determining
the
fate
carbon
ocean.
Dissolved
(DOM)
release
by
phytoplankton
a
ubiquitous
process,
resulting
2–50%
fixed
photosynthesis
leaving
cell.
This
loss
can
be
divided
into
two
components:
passive
leakage
diffusion
across
cell
membrane
active
exudation
DOM
surrounding
environment.
At
present
there
no
method
to
distinguish
whether
released
via
or
exudation.
Most
explanations
for
remain
hypothetical;
as
while
has
been
measured
extensively,
relatively
little
work
determine
why
released.
Further
research
needed
composition
link
physiological
status
environmental
conditions.
For
example,
causes
physiology
death
are
poorly
understood,
though
increases
permeability
presumably
release.
Recent
shown
that
interactions
with
bacteria
both
amount
In
response
increasing
CO2
atmosphere,
climate
change
creating
increasingly
stressful
conditions
surface
ocean,
including
warm
water,
low
pH,
nutrient
supply
high
light.
As
ocean
physics
chemistry
change,
it
hypothesized
greater
proportion
primary
production
will
directly
water
DOM.
Changes
have
bottom-up
effects
on
ecosystem
structure
function.
There
need
how
these
changes
affect
particularly
efficiency
biological
pump.
Frontiers in Marine Science,
Journal Year:
2017,
Volume and Issue:
4
Published: Feb. 16, 2017
Phytoplankton
are
the
base
of
Antarctic
food
web,
sustain
wealth
and
diversity
life
for
which
Antarctica
is
renowned,
play
a
critical
role
in
biogeochemical
cycles
that
mediate
global
climate.
Over
vast
expanse
Southern
Ocean
(SO),
climate
variously
predicted
to
experience
increased
warming,
strengthening
wind,
acidification,
shallowing
mixed
layer
depths,
light
(and
UV),
changes
upwelling
nutrient
replenishment,
declining
sea
ice,
reduced
salinity,
southward
migration
ocean
fronts.
These
expected
alter
structure
function
phytoplankton
communities
SO.
The
diverse
environments
contained
within
SO
will
be
impacted
differently
by
change;
causing
identity
magnitude
environmental
factors
driving
biotic
change
vary
among
bioregions.
Predicting
net
effect
multiple
climate-induced
stressors
over
range
complex.
Yet
understanding
response
vital
if
we
predict
future
state/s
ecosystem,
estimate
impacts
on
fisheries
endangered
species,
accurately
effects
physical
This
review
looks
at
major
define
SO,
examines
forecast
environment,
predicts
likely
these
phytoplankton,
considers
ramifications
trophodynamics
feedbacks
change.
Predictions
strongly
suggest
all
regions
productivity
community
composition
with
nature,
even
sign,
varies
depend
upon
sequence
imposed.
It
affect
biogeochemistry,
carbon
export,
nutrition
higher
trophic
levels.
Harmful Algae,
Journal Year:
2019,
Volume and Issue:
91, P. 101583 - 101583
Published: June 20, 2019
Climate
projections
suggest-with
substantial
certainty-that
global
warming
>1.5
°C
will
occur
by
mid-century
(2050).
Population
is
also
projected
to
increase,
amplifying
the
demands
for
food,
fuel,
water
and
sanitation,
which,
in
turn,
escalate
nutrient
pollution.
Global
of
pollution,
however,
are
less
certain
than
those
climate
as
there
regionally
decreasing
trends
Europe,
stabilization
use
North
America
Australia.
In
this
review
effects
eutrophication
on
harmful
algae,
some
complex,
subtle,
non-intuitive
interactions
physiology
both
non-harmful
taxa
emphasized.
a
future
ocean,
diatoms
may
be
disproportionately
stressed
mixotrophs
advantaged
due
changing
stoichiometry
forms
nutrients,
temperature,
stratification
oceanic
pH.
Modeling
advancing,
but
much
yet
understood,
terms
physiology,
biogeochemistry
trophodynamics
how
nonharmful
change
an
uncertain
driven
anthropogenic
activities.