bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: Nov. 6, 2024
ABSTRACT
Vaccines
remain
a
vital
public
health
tool
to
reduce
the
burden
of
COVID-19.
COVID-19
vaccines
that
are
more
closely
matched
circulating
SARS-CoV-2
lineages
elicit
potent
and
relevant
immune
responses
translate
improved
real-world
vaccine
effectiveness.
The
rise
in
prevalence
Omicron
JN.1
lineage,
subsequent
derivative
sublineages
such
as
KP.2
KP.3,
coincided
with
reduced
neutralizing
activity
effectiveness
XBB.1.5-adapted
vaccines.
Here,
we
characterized
biophysical
immunologic
attributes
BNT162b2
JN.1-
KP.2-adapted
mRNA
vaccine-encoded
spike
(S)
protein
immunogens.
Biophysical
interrogations
S
revealed
structural
consequences
hallmark
amino
acid
substitutions
potential
molecular
mechanism
escape
employed
by
KP.2.
candidates
were
evaluated
for
their
immunogenicity
when
administered
fourth
or
fifth
doses
BNT162b2-experienced
mice
primary
series
naïve
mice.
In
both
vaccine-experienced
settings,
conferred
over
XBB.1.5
against
broad
panel
emerging
sublineages,
including
predominant
KP.3.1.1
XEC
lineages.
Antigenic
mapping
indicated
greater
antigenic
overlap
currently
compared
an
vaccine.
CD4
+
CD8
T
cell
generally
conserved
across
all
three
Together,
data
support
selection
2024-25
formula.
ONE-SENTENCE
SUMMARY
encoding
prefusion
proteins
similar
preclinical
antibody
sublineage
pseudoviruses
than
those
elicited
past
iterations
licensed
vaccines,
thus
demonstrating
importance
annual
strain
changes
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Nov. 27, 2023
Summary
COVID-19
vaccines
have
recently
been
updated
with
the
spike
protein
of
SARS-CoV-2
XBB.1.5
subvariant
alone,
but
their
immunogenicity
in
humans
has
yet
to
be
fully
evaluated
and
reported,
particularly
against
emergent
viruses
that
are
rapidly
expanding.
We
now
report
administration
an
monovalent
mRNA
vaccine
(XBB.1.5
MV)
uninfected
individuals
boosted
serum
virus-neutralization
antibodies
significantly
not
only
(27.0-fold)
currently
dominant
EG.5.1
(27.6-fold)
also
key
like
HV.1,
HK.3,
JD.1.1,
JN.1
(13.3-to-27.4-fold).
In
previously
infected
by
Omicron
subvariant,
neutralizing
titers
were
highest
levels
(1,504-to-22,978)
all
viral
variants
tested.
While
immunological
imprinting
was
still
evident
vaccines,
it
nearly
as
severe
authorized
bivalent
BA.5
vaccine.
Our
findings
strongly
support
official
recommendation
widely
apply
further
protect
public.
Vaccines,
Journal Year:
2024,
Volume and Issue:
12(2), P. 118 - 118
Published: Jan. 24, 2024
Vaccination
remains
an
important
mitigation
tool
against
COVID-19.
We
report
1-month
safety
and
preliminary
immunogenicity
data
from
a
substudy
of
ongoing,
open-label,
phase
2/3
study
monovalent
Omicron
XBB.1.5-adapted
BNT162b2
(single
30-μg
dose).
Healthy
participants
≥12
years
old
(N
=
412
(12–17
years,
N
30;
18–55
174;
>55
208))
who
previously
received
≥3
doses
US-authorized
mRNA
vaccine,
the
most
recent
being
BA.4/BA.5-adapted
bivalent
vaccine
≥150
days
before
vaccination,
were
vaccinated.
Serum
50%
neutralizing
titers
XBB.1.5,
EG.5.1,
BA.2.86
measured
7
1
month
after
vaccination
in
subset
≥18-year-olds
40)
positive
for
SARS-CoV-2
at
baseline.
Seven-day
was
also
evaluated
matched
group
previous
(ClinicalTrials.gov
Identifier:
NCT05472038).
There
no
new
signals;
local
reactions
systemic
events
mostly
mild
to
moderate
severity,
adverse
infrequent,
none
led
withdrawal.
The
induced
numerically
higher
than
robust
responses
all
three
sublineages
month.
These
support
favorable
benefit-risk
profile
30
μg.
ClinicalTrials.gov
NCT05997290
Vaccination
remains
an
important
mitigation
tool
against
COVID-19.
We
report
1-month
safety
and
preliminary
immunogenicity
data
from
a
substudy
of
ongoing,
open-label,
phase
2/3
study
monovalent
Omicron
XBB.1.5-adapted
BNT162b2
(single
30-μg
dose).
Healthy,
participants
≥12
years
old
(N=412
[12‒17
years,
N=30;
18‒55
N=174;
>55
N=208])
who
previously
received
≥3
doses
US-authorized
mRNA
vaccine,
the
most
recent
being
BA.4/BA.5-adapted
bivalent
vaccine
≥150
days
before
vaccination,
were
vaccinated.
Serum
50%
neutralizing
titers
XBB.1.5,
EG.5.1,
BA.2.86
measured
7
1
month
after
vaccination
in
subset
≥18-year-olds
(N=40)
positive
for
SARS-CoV-2
at
baseline.
Seven-day
was
also
evaluated
matched
group
previous
(NCT05472038).
There
no
new
signals;
local
reactions
systemic
events
mostly
mild
to
moderate
severity,
adverse
infrequent,
none
led
withdrawal.
The
induced
numerically
higher
than
robust
responses
all
3
sublineages
month.
These
support
favorable
benefit-risk
profile
30
μg.
NCT05997290
Journal of Medical Virology,
Journal Year:
2024,
Volume and Issue:
96(7)
Published: July 1, 2024
Abstract
SARS‐CoV‐2
Omicron
lineages
continue
to
emerge
and
evolve
into
new
sublineages,
causing
infection
waves
throughout
2022
2023,
which
has
been
attributed
immune
escape.
We
examined
neutralizing
antibody
responses
the
recently
emerged
JN.1
variant
in
comparison
ancestral
D614G
BA.1,
BA.2,
BA.5,
XBB.1.5
variants.
tested
79
human
sera
from
cohorts
with
different
combinations
of
vaccinations
infections,
including
23
individuals
who
had
repeatedly
exposed
Omicron.
Individuals
a
monovalent
vaccine
booster
or
breakthrough
robust
levels
against
all
variants
tested;
however,
evaded
antibodies
after
single
BA.2
BA.5
infections.
Moreover,
non‐vaccinated
cohort,
serum
demonstrated
almost
no
cross‐neutralization
activities
D614G,
JN.1.
infections
earlier
These
findings
show
that
SARS‐CoV‐2‐immunity
is
heterogeneous,
depending
on
emphasize
importance
considering
immune‐backgrounds
when
evaluating
novel
medRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Dec. 28, 2023
ABSTRACT
Importance
Data
describing
the
early
additional
protection
afforded
by
recently
recommended
XBB1.5-
adapted
COVID-19
vaccines
are
limited.
Objective
We
estimated
association
between
receipt
of
BNT162b2
XBB1.5-adapted
vaccine
(Pfizer-
BioNTech
2023–2024
formulation)
and
medically
attended
outcomes
among
adults
≥18
years
age.
Design,
Setting,
Participants
performed
a
test-negative
case-control
study
to
compare
odds
cases
controls
in
Kaiser
Permanente
Southern
California
health
system
October
11
December
10,
2023.
Adjusted
ratios
(OR)
95%
confidence
intervals
(CI)
were
from
multivariable
logistic
regression
models
that
adjusted
for
patient
demographic
clinical
characteristics.
Exposure
The
primary
exposure
was
compared
not
receiving
an
any
kind,
regardless
prior
vaccination
or
SARS-CoV-2
infection
history.
also
(non-XBB1.5-adapted)
versions
unvaccinated
estimate
remaining
older
vaccines.
Main
Outcomes
Measures
Cases
those
with
positive
polymerase
chain
reaction
test,
tested
negative.
Analyses
done
separately
hospital
admissions,
emergency
department
(ED)
urgent
care
(UC)
encounters,
outpatient
visits.
Results
Among
4232
19,775
median
age
54
years,
ORs
testing
who
received
30
days
ago
(
vs
having
kind)
0.37
(95%
CI:
0.20–0.67)
hospitalization,
0.42
(0.34–0.53)
ED/UC
visits,
(0.27–0.66)
Compared
unvaccinated,
had
only
did
show
significantly
reduced
risk
outcomes,
including
admission.
Conclusions
Relevance
Our
findings
reaffirm
current
recommendations
broad
age-based
use
annually
updated
given
(1)
provided
significant
against
range
(2)
offered
little,
if
any,
protection,
admission,
number
type
doses
received.
KEY
POINTS
Questions
Does
offer
admission
ambulatory
visits
US
kind?
Do
still
provide
unvaccinated?
Findings
(Pfizer-BioNTech
during
period
when
XBB
sub-lineages
predominant
but
JN.1
co-circulating
rapidly
increasing
prevalence.
Older
Meaning
The
continued
evolution
of
severe
acute
respiratory
syndrome
2
(SARS-CoV-2)
requires
persistent
monitoring
its
subvariants.
Omicron
subvariants
are
responsible
for
the
vast
majority
SARS-CoV-2
infections
worldwide,
with
XBB
and
BA.2.86
sublineages
representing
more
than
90%
circulating
strains
as
January
2024.
To
better
understand
parameters
involved
in
viral
transmission,
we
characterized
functional
properties
Spike
glycoproteins
from
BA.2.75,
CH.1.1,
DV.7.1,
BA.4/5,
BQ.1.1,
XBB,
XBB.1,
XBB.1.16,
XBB.1.5,
FD.1.1,
EG.5.1,
HK.3,
JN.1.
We
tested
their
capacity
to
evade
plasma-mediated
recognition
neutralization,
binding
angiotensin-converting
enzyme
(ACE2),
susceptibility
cold
inactivation,
processing,
well
impact
temperature
on
Spike-ACE2
interaction.
found
that
compared
early
wild-type
(D614G)
strain,
most
subvariants'
evolved
escape
neutralization
by
plasma
individuals
who
received
a
fifth
dose
bivalent
(BA.1
or
BA.4/5)
mRNA
vaccine
improve
ACE2
binding,
particularly
at
low
temperatures.
Moreover,
had
best
affinity
all
temperatures
tested.
processing
is
associated
inactivation.
Intriguingly,
was
significantly
growth
rates
humans.
Overall,
report
Spikes
newly
emerged
relatively
stable
resistant
present
improved
which
associated,
temperatures,
rates.IMPORTANCEThe
gave
rise
wide
range
variants
harboring
new
mutations
glycoproteins.
Several
factors
have
been
transmission
fitness
such
plasma-neutralization
whether
additional
could
be
importance
variants'
characterize
several
glycoprotein
presents
an
further
temperature.
interaction
strongly
rate,
such,
represent
another
parameter
affecting
transmission.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: April 6, 2024
Abstract
Antigenic
assessments
of
SARS-CoV-2
variants
inform
decisions
to
update
COVID-19
vaccines.
Primary
infection
sera
are
often
used
for
assessments,
but
such
rare
due
population
immunity
from
infections
and
vaccinations.
Here,
we
show
that
neutralization
titers
breadth
matched
human
hamster
pre-Omicron
variant
primary
correlate
well
generate
similar
antigenic
maps.
The
map
shows
modest
drift
among
XBB
sub-lineage
variants,
with
JN.1
BA.4/BA.5
within
the
cluster,
five
six-fold
differences
between
these
XBB.1.5.
Compared
following
only
ancestral
or
bivalent
vaccinations,
post-vaccination
infections,
XBB.1.5
booster
had
broadest
against
although
a
five-fold
titer
difference
was
still
observed
variants.
These
findings
suggest
antibody
coverage
antigenically
divergent
could
be
improved
vaccine
antigen.