New Phytologist,
Journal Year:
2025,
Volume and Issue:
unknown
Published: April 18, 2025
Summary
Plant
interactions
with
abiotic
and
biotic
environments
are
mediated
by
diverse
metabolites,
which
crucial
for
stress
response
defense.
These
metabolites
can
not
only
support
diversity
shaping
species
niche
differences
but
also
display
heritable
plastic
intraspecific
variation,
few
studies
have
quantified
in
terms
of
their
relative
contributions.
To
address
this
shortcoming,
we
used
untargeted
metabolomics
to
annotate
quantify
foliar
restriction‐site
associated
DNA
(RAD)
sequencing
assess
genetic
distances
among
300
individuals
10
locally
abundant
from
a
tropical
community
Southwest
China.
We
the
contributions
relatedness
environment
metabolite
considering
different
biosynthetic
pathways.
Intraspecific
variation
contributed
most
community‐level
diversity,
followed
species‐level
variation.
Biotic
factors
had
largest
effect
on
total
secondary
while
strongly
influenced
primary
particularly
carbohydrates.
The
importance
these
varied
widely
across
pathways
species.
Our
findings
highlight
that
is
an
essential
component
diversity.
Furthermore,
rely
distinct
classes
adapt
environmental
pressures,
genetic,
abiotic,
playing
pathway‐specific
roles
driving
New Phytologist,
Journal Year:
2022,
Volume and Issue:
234(4), P. 1168 - 1174
Published: March 17, 2022
Niche
theory
considering
the
traits
of
species
and
individuals
provides
a
powerful
tool
to
integrate
ecology
evolution
species.
In
plant
ecology,
morphological
physiological
are
commonly
considered
as
niche
dimensions,
whereas
phytochemical
mostly
neglected
in
this
context
despite
their
pivotal
functions
responses
environment
mediating
interactions.
The
diversity
phytochemicals
can
thus
mediate
three
key
processes:
choice,
conformance
construction.
Here,
we
frameworks
from
with
chemical
argue
that
plants
use
individual-specific
(chemodiversity)
for
different
realization
processes.
Our
concept
has
important
implications
ecosystem
processes
stability
increases
predictive
ability
ecology.
Limnology and Oceanography Letters,
Journal Year:
2022,
Volume and Issue:
8(2), P. 229 - 246
Published: Dec. 8, 2022
Abstract
The
worldwide
proliferation
of
harmful
algal
blooms
(HABs)
both
in
freshwater
and
marine
ecosystems
make
understanding
predicting
their
occurrence
urgent.
Trait‐based
approaches,
where
the
focus
is
on
functional
traits,
have
been
successful
explaining
community
structure
dynamics
diverse
but
not
applied
extensively
to
HABs.
existing
trait
compilations
suggest
that
HAB
taxa
differ
from
non
key
traits
determine
responses
major
environmental
drivers.
Multi‐trait
comparisons
between
HAB‐forming
other
phytoplankton
taxa,
as
well
within
groups
characterize
interspecific
intraspecific
differences
will
help
better
define
ecological
niches
different
develop
trait‐based
mechanistic
models,
identify
conditions
would
likely
lead
Building
databases
using
them
statistical
models
increase
our
ability
predict
occurrence,
composition,
severity
under
changing
conditions,
including
anthropogenic
global
change.
New Phytologist,
Journal Year:
2023,
Volume and Issue:
239(4), P. 1212 - 1224
Published: July 8, 2023
Summary
Root
traits
including
root
exudates
are
key
factors
affecting
plant
interactions
with
soil
and
thus
play
an
important
role
in
determining
ecosystem
processes.
The
drivers
of
their
variation,
however,
remain
poorly
understood.
We
determined
the
relative
importance
phylogeny
species
ecology
analyzed
extent
to
which
exudate
composition
can
be
predicted
by
other
traits.
measured
different
morphological
biochemical
(including
profiles)
65
grown
a
controlled
system.
tested
phylogenetic
conservatism
disentangled
individual
overlapping
effects
on
also
using
Phylogenetic
signal
differed
greatly
among
traits,
strongest
phenol
content
tissues.
Interspecific
variation
was
partly
explained
ecology,
but
more
most
cases.
Species
could
specific
length,
dry
matter
content,
biomass,
diameter,
large
part
remained
unexplained.
In
conclusion,
exudation
cannot
easily
based
comparative
data
needed
understand
diversity.
Annual Review of Ecology Evolution and Systematics,
Journal Year:
2023,
Volume and Issue:
54(1), P. 107 - 127
Published: Aug. 4, 2023
Classic
theory
relates
herbivore
pressure
to
the
ecology
and
evolution
of
plant
defenses.
Here,
we
summarize
current
trends
in
study
plant–herbivore
interactions
how
they
shape
chemical
defenses,
host
choice,
community
composition
diversity.
Inter-
intraspecific
variation
defense
investment
is
driven
by
resource
availability.
The
defenses
at
deeper
nodes
phylogeny
conserved,
yet
are
highly
labile
tips.
On
an
ecological
timescale,
while
greater
specialization
tropical
herbivores
enhances
local
diversity
reducing
performance
plants
with
similar
temperate
ecosystems
more
generalist
herbivores,
rare
profiles
a
disadvantage.
evolutionary
choice
largely
determined
rather
than
phylogeny,
leading
tracking
cocladogenesis.
interplay
between
shapes
both
origin
maintenance
Journal of Ecology,
Journal Year:
2024,
Volume and Issue:
112(5), P. 936 - 953
Published: April 6, 2024
Abstract
Trophic
rewilding
is
gaining
rapid
momentum
as
a
means
of
restoration
across
the
world.
Advances
in
research
are
elucidating
wide‐ranging
effects
trophic
and
megafauna
re‐establishment
on
ecosystem
properties
processes
including
resilience,
nutrient
cycling,
carbon
sequestration,
productivity
plant
richness.
A
substantial
gap
remains
how
affects
frequency
expression
functional
traits,
key
hypothesised
avenue
by
which
can
affect
biodiversity
processes.
Yet,
there
extensive
literature
examining
mammal
herbivory
exclusion
traits
from
we
may
infer
potential
reintroductions.
Here,
synthesise
to
show
multifaceted
ways
that
composition
responds
mammalian
explore
these
responses
modulated
density
identity
herbivores
well
resource
availability,
historical
contingency.
We
further
interactions
quantitative
analysis
European
species.
In
addition,
link
broad
patterns
between
invasions
predict
be
able
reduce
invasive
dominance,
ecosystems
around
world
transitioning
towards
novel
states,
occupied
mix
native
introduced
Expanding
current
herbivore
(and
their
implications
for
rewilding)
beyond
species
richness
measurable
help
assess
quantify
were
not
previously
possible.
Trait
approaches
test
mechanistic
hypotheses
top‐down
impacts
large
communities
reveal
links
properties.
Synthesis
.
Given
rapid,
much‐needed
expansion
activities
world,
trait‐based
ecology
offers
pathway
generalisable
predictions
rewilding,
particularly
context
both
unique
landscape
associated
with
(e.g.
scale
spatiotemporal
variability,
dispersal)
widely
emerging
ecosystems.
Communications Biology,
Journal Year:
2025,
Volume and Issue:
8(1)
Published: March 4, 2025
Invasive
plants
threaten
global
ecosystems,
yet
traditional
analyses
of
functional
traits
cannot
fully
explain
their
dominance
over
co-occurring
natives.
Metabolomics
offers
insights
into
plant
invasions,
but
single-technique
studies
often
miss
critical
biochemical
mechanisms.
We
employ
a
multimodal
metabolomics
approach
(¹H
NMR,
LC
MS/MS,
FT-ICR-MS,
and
MALDI-MSI)
to
investigate
the
basis
Lehmann
lovegrass
(Eragrostis
lehmanniana)
invasion
in
semi-arid
North
America,
comparing
it
with
native
grass,
Arizona
cottontop
(Digitaria
californica).
Our
analysis
reveals
three
metabolomic
compared
cottontop:
Enhanced
nitrogen
allocation
shoots,
reduced
defensive
metabolites
root
layers;
increased
exudate
modulation
under
stress
conditions.
These
suggest
succeeds
through
adaptation
increasing
aridity
rather
than
direct
competition,
demonstrating
nutrient-poor
environments
high
phenotypic
plasticity
response
aridity.
This
integrated
provides
new
mechanistic
ecology
environmental
change.
New Phytologist,
Journal Year:
2022,
Volume and Issue:
237(6), P. 2478 - 2492
Published: Dec. 17, 2022
Summary
Plants
produce
large
numbers
of
phytochemical
compounds
affecting
plant
physiology
and
interactions
with
their
biotic
abiotic
environment.
Recently,
chemodiversity
has
attracted
considerable
attention
as
an
ecologically
evolutionary
meaningful
way
to
characterize
the
phenotype
a
mixture
compounds.
Currently
used
measures
diversity,
related
dissimilarity,
generally
do
not
take
structural
or
biosynthetic
properties
into
account.
Such
can
be
indicative
compounds'
function
inform
about
(in)dependence,
should
therefore
included
in
calculations
these
measures.
We
introduce
R
package
chemodiv
,
which
retrieves
biochemical
from
databases
provides
functions
for
calculating
visualizing
chemical
diversity
dissimilarity
phytochemicals
other
types
Our
enables
that
takes
richness,
relative
abundance
–
most
importantly
and/or
illustrate
use
examples
on
simulated
real
datasets.
By
providing
quantifying
multiple
aspects
chemodiversity,
we
hope
facilitate
investigations
how
varies
across
levels
biological
organization,
its
importance
ecology
evolution
plants
organisms.
Methods in Ecology and Evolution,
Journal Year:
2022,
Volume and Issue:
14(2), P. 444 - 458
Published: Nov. 22, 2022
Abstract
Traits
have
become
a
crucial
part
of
ecological
and
evolutionary
sciences,
helping
researchers
understand
the
function
an
organism's
morphology,
physiology,
growth
life
history,
with
effects
on
fitness,
behaviour,
interactions
environment
ecosystem
processes.
However,
measuring,
compiling
analysing
trait
data
comes
data‐scientific
challenges.
We
offer
10
(mostly)
simple
rules,
some
detailed
extensions,
as
guide
in
making
critical
decisions
that
consider
entire
cycle
data.
This
article
is
particularly
motivated
by
its
last
rule,
is,
to
propagate
good
practice.
It
has
intention
bringing
awareness
how
traits
organisms
can
be
collected
managed
for
reuse
research
community.
Trait
observations
are
relevant
broad
interdisciplinary
community
field
biologists,
synthesis
ecologists,
computer
scientists
database
managers.
hope
these
basic
guidelines
useful
starter
active
communication
disseminating
such
integrative
knowledge
make
future‐proof.
invite
scientific
participate
this
effort
at
http://opentraits.org/best‐practices.html
.
Ecology Letters,
Journal Year:
2023,
Volume and Issue:
26(11), P. 1898 - 1910
Published: Sept. 30, 2023
Metabolomics
provides
an
unprecedented
window
into
diverse
plant
secondary
metabolites
that
represent
a
potentially
critical
niche
dimension
in
tropical
forests
underlying
species
coexistence.
Here,
we
used
untargeted
metabolomics
to
evaluate
chemical
composition
of
358
tree
and
its
relationship
with
phylogeny
variation
light
environment,
soil
nutrients,
insect
herbivore
leaf
damage
rainforest
plot.
We
report
no
phylogenetic
signal
most
compound
classes,
indicating
rapid
diversification
metabolomes.
found
locally
co-occurring
were
more
chemically
dissimilar
than
random
local
dispersion
metabolite
diversity
associated
lower
herbivory,
especially
specialist
herbivores.
Our
results
highlight
the
role
mediating
plant-herbivore
interactions
their
potential
facilitate
differentiation
manner
contributes
Furthermore,
our
findings
suggest
pressure
is
important
mechanism
promoting
phytochemical
forests.