Direct Cloning and Heterologous Expression of the Dmxorosin Biosynthetic Gene Cluster from Streptomyces thermolilacinus SPC6, a Halotolerant Actinomycete Isolated from the Desert in China DOI Open Access

Maoxing Dong,

Huyuan Feng, Wei Zhang

et al.

International Journal of Molecular Sciences, Journal Year: 2025, Volume and Issue: 26(4), P. 1492 - 1492

Published: Feb. 11, 2025

Streptomyces thermolilacinus SPC6 is a halotolerant strain isolated from the Linze Desert in China. It has very high growth rate and short life cycle compared to other Streptomycetes, including model organism coelicolor. The one strain–many compounds fermentation approach global natural products investigation revealed that exhibits impressive productivity of secondary metabolites. Genome mining uncovered 20 typical metabolic biosynthetic gene clusters (BGC), with BGC dmx identified as completely silent. Subsequently, this cryptic was successfully directly cloned heterologously expressed hosts, resulting discovery new lanthipeptide, dmxorosin. Notably, proposed pathway indicates its potential basis for synthetic biology lanthipeptide.

Language: Английский

Bacterial pigments: A colorful palette reservoir for biotechnological applications DOI Creative Commons
Viviana Teresa Orlandi, Eleonora Martegani, Cristina Giaroni

et al.

Biotechnology and Applied Biochemistry, Journal Year: 2021, Volume and Issue: 69(3), P. 981 - 1001

Published: April 19, 2021

Abstract Synthetic derivatives are currently used instead of pigments in many applicative fields, from food to feed, pharmaceutical diagnostic, agronomy industry. Progress organic chemistry allowed obtain rather cheap compounds covering the whole color spectrum. However, several concerns arise this chemical approach, as it is mainly based on nonrenewable resources such fossil oil, and toxicity or carcinogenic properties products and/or precursors may be harmful for personnel involved productive processes. In scenario, microorganisms their represent a colorful world discover reconsider. Each living bacterial strain source secondary metabolites with peculiar functions. The aim review link physiological role potential use different biotechnological fields. This enormous supports big challenge development strategies useful identify, produce, purify right pigment desired application. At end ideal journey through pigments, attention will focused melanin compounds, whose production relies upon techniques ranging natural producers, heterologous hosts, isolated enzymes. green workflow, starting final point production.

Language: Английский

Citations

51

A field study reveals links between hyperaccumulating Sedum plants-associated bacterial communities and Cd/Zn uptake and translocation DOI Creative Commons
Yingjie Wu, Susana S. Santos, Mette Vestergård

et al.

The Science of The Total Environment, Journal Year: 2021, Volume and Issue: 805, P. 150400 - 150400

Published: Sept. 17, 2021

Hyperaccumulating ecotypes of Sedum plants are promising Cd/Zn phytoextractors, with potential for leveraging its rhizospheric or endophytic microbiomes to improve phytoremediation efficiency. However, research bacteria associated at field scale is still lacking. Here, we presented a detailed investigation the bacterial microbiome hyperaccumulating (S. alfredii and S. plumbizincicola) non-hyperaccumulating ecotype, which grow different soil environments. Moreover, evaluated heavy metal uptake translocation locations. The results showed that both HE ecotypes, contrary NHE, were efficient in mine areas farmlands. For NHE plants, rhizosphere co-occurrence networks more complex than other compartments, while bulk roots. proportion positive correlations within was higher suggesting greater mutualistic interactions. Plant compartment location predominantly shaped assembly, Proteobacteria, Actinobacteria Acidobacteria dominated communities plants. Keystone taxa related Zn hyperaccumulation similar those Cd hyperaccumulation, nine genera had significantly correlation hyperaccumulation. Taxa, linked farmland (i.e. Actinospica Streptomyces from Actinobacteria), could be targets further their ability promote species.

Language: Английский

Citations

41

Microorganisms and Their Metabolic Capabilities in the Context of the Biogeochemical Nitrogen Cycle at Extreme Environments DOI Open Access
Rosa María Martínez‐Espinosa

International Journal of Molecular Sciences, Journal Year: 2020, Volume and Issue: 21(12), P. 4228 - 4228

Published: June 13, 2020

Extreme microorganisms (extremophile) are organisms that inhabit environments characterized by inhospitable parameters for most live beings (extreme temperatures and pH values, high or low ionic strength, pressure, scarcity of nutrients). To grow optimally under these conditions, extremophiles have evolved molecular adaptations affecting their physiology, metabolism, cell signaling, etc. Due to peculiarities in terms physiology they become good models (i) understanding the limits life on Earth, (ii) exploring possible existence extraterrestrial (Astrobiology), (iii) look potential applications biotechnology. Recent research has revealed extremophilic microbes play key roles all biogeochemical cycles Earth. Nitrogen cycle (N-cycle) is one important nature; thanks it, nitrogen converted into multiple chemical forms, which circulate among atmospheric, terrestrial aquatic ecosystems. This review summarizes recent knowledge role extreme N-cycle ecosystems, with special emphasis members Archaea domain. Potential implications global warming balance, as well biotechnological also discussed.

Language: Английский

Citations

49

Lead/Drug Discovery from Natural Resources DOI Creative Commons
Zhihong Xu, Barrett E. Eichler,

Eytan A. Klausner

et al.

Molecules, Journal Year: 2022, Volume and Issue: 27(23), P. 8280 - 8280

Published: Nov. 28, 2022

Natural products and their derivatives have been shown to be effective drug candidates against various diseases for many years. Over a long period of time, nature has produced an abundant prosperous source pool novel therapeutic agents with distinctive structures. Major natural-product-based drugs approved clinical use include anti-infectives anticancer agents. This paper will review some natural-product-related potent anticancer, anti-HIV, antibacterial antimalarial or lead compounds mainly discovered from 2016 2022. Structurally typical marine bioactive are also included. Molecular modeling, machine learning, bioinformatics other computer-assisted techniques that very important in narrowing down core structural scaffolds helping design new structures fight key disease-associated molecular targets based on available natural considered briefly reviewed.

Language: Английский

Citations

27

Streptomyces sp. Strain PBR11, a Forest-Derived Soil Actinomycetia with Antimicrobial Potential DOI Creative Commons
Rajkumari Mazumdar, Partha Dutta,

Juri Saikia

et al.

Microbiology Spectrum, Journal Year: 2023, Volume and Issue: 11(2)

Published: Jan. 31, 2023

The

Language: Английский

Citations

16

Blastococcus brunescens sp. nov., a member of the Geodermatophilaceae isolated from sandstone collected from the Sahara Desert in Tunisia DOI
Karima Hezbri, Ikram Kammoun, Imed Sbissi

et al.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, Journal Year: 2024, Volume and Issue: 74(4)

Published: April 3, 2024

The taxonomic position of strain BMG 8361

Language: Английский

Citations

5

Metagenomic approaches and opportunities in arid soil research DOI
Muhammad Ejaz, Kareem Rady Badr, Zahoor Ul Hassan

et al.

The Science of The Total Environment, Journal Year: 2024, Volume and Issue: 953, P. 176173 - 176173

Published: Sept. 10, 2024

Language: Английский

Citations

5

Diversity and Antimicrobial Activity of Endophytic Fungi Isolated from Chloranthus japonicus Sieb in Qinling Mountains, China DOI Open Access
Chao An,

Saijian Ma,

Xinwei Shi

et al.

International Journal of Molecular Sciences, Journal Year: 2020, Volume and Issue: 21(17), P. 5958 - 5958

Published: Aug. 19, 2020

The plant Chloranthus japonicus Sieb is known for its anticancer properties and mainly distributed in China, Japan, Korea. In this study, we firstly investigated the diversity antimicrobial activity of culturable endophytic fungi from C. japonicus. A total 332 fungal colonies were successfully isolated 555 tissue segments medicinal collected Qinling Mountains, China. One hundred thirty representative morphotype strains identified according to ITS rDNA sequence analyses grouped into three phyla (Ascomycota, Basidiomycota, Mucoromycota), five classes (Dothideomycetes, Sordariomycetes, Eurotiomycetes, Agaricomycetes, Mucoromycetes), at least 30 genera. Colletotrichum (RA, 60.54%) was most abundant genus, followed by Aspergillus 11.75%) Diaporthe 9.34%). Species Richness Index (S, 56) Shannon-Wiener (H′, 2.7076) indicated that harbored resources. Thirteen out 130 ethyl acetate extracts exhibited inhibitory activities against one pathogenic bacterium or fungus. Among these, F8158, which as Trichoderma cf. harzianum, good antagonistic capacities (the percent inhibition mycelial growth ranged 47.72~88.18) different pathogens has a potential application biological control. addition, it noteworthy strain F8157 (Thanatephorus cucumeris, an opportunistic pathogen) showed antibacterial antifungal activity, reported should be further. Taken together, these results may interest screening bio-control agents discovering new bioactive compounds.

Language: Английский

Citations

33

Diversity, Ecological Role and Biotechnological Potential of Antarctic Marine Fungi DOI Creative Commons
Stefano Varrella, Giulio Barone, Michael Tangherlini

et al.

Journal of Fungi, Journal Year: 2021, Volume and Issue: 7(5), P. 391 - 391

Published: May 17, 2021

The Antarctic Ocean is one of the most remote and inaccessible environments on our planet hosts potentially high biodiversity, being largely unexplored undescribed. Fungi have key functions unique physiological morphological adaptations even in extreme conditions, from shallow habitats to deep-sea sediments. Here, we summarized information diversity, ecological role, biotechnological potential marine fungi coldest biome Earth. This review also discloses importance boosting research as hidden treasures biodiversity bioactive molecules better understand their role ecosystem functioning applications different fields.

Language: Английский

Citations

32

Isolation and Evaluation of Rhizosphere Actinomycetes With Potential Application for Biocontrolling Fusarium Wilt of Banana Caused by Fusarium oxysporum f. sp. cubense Tropical Race 4 DOI Creative Commons
Lu Zhang,

Huixi Zhang,

Yating Huang

et al.

Frontiers in Microbiology, Journal Year: 2021, Volume and Issue: 12

Published: Oct. 25, 2021

Fusarium wilt of banana caused by oxysporum f. sp. cubense tropical race 4 (TR4) is globally one the most destructive soil-borne fungal diseases. Biological control using environmental microorganisms considered as an alternative and sustainable strategy. Actinomycetes have potential to explore biocontrol agents due their production diverse metabolites. The isolation identification high-efficiency broad-spectrum antagonistic actinomycetes are key for application agents. In present study, 60 were obtained from rhizosphere soil Machilus pingii in primitive ecological natural reserve Hainan province, China. Seventeen isolates extracts exhibited significant antifungal activity against F. TR4. Particularly, strain BITDG-11 with strongest inhibition ability had a activity. assay its physiological biochemical profiles showed that produce IAA siderophores positive response gelatin liquefaction nitrate reduction. Enzyme activities chitinase, β-1,3-glucanase, lipase, urease also detected. Average nucleotide identity calculated comparison standard genome Streptomyces albospinus JCM3399 was 86.55% below novel species threshold, suggesting could be species. addition, obviously reduced disease index plantlets promoted plant growth at 45 days post inoculation. higher lasting expression levels defense genes antioxidant enzymes induced roots banana. Genome sequencing revealed chromosome contained large numbers conserved biosynthesis gene clusters encoding terpenes, non-ribosomal peptides, polyketides, siderophores, ectoines. Fifteen bioactive secondary metabolites further identified extract gas chromatography–mass spectrometry. Dibutyl phthalate demonstrating strong major compound highest peak area. Hence, has great become essential constituent modern agricultural practice biofertilizers

Language: Английский

Citations

32