bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Nov. 5, 2023
Abstract
Biodiversity
is
distributed
unevenly
among
lineages
and
regions,
understanding
the
processes
generating
these
global
patterns
a
central
goal
in
evolutionary
research,
particularly
light
of
current
biodiversity
crisis.
Here,
we
integrate
phylogenetic
relatedness
with
species
diversity
four
major
clades
living
tetrapods
(amphibians,
squamates,
birds
mammals)
to
approach
this
challenge.
We
studied
geographic
richness-corrected
(residual
PD),
identifying
regions
where
are
phylogenetically
more
closely
or
distantly
related
than
expected
by
richness.
explored
effect
different
factors
residual
PD:
recent
speciation
rates,
temporal
trends
lineage
accumulation,
environmental
variables.
Specifically,
searched
for
ecological
differences
between
high
low
PD.
Our
results
reveal
nuanced
relationship
rates
PD,
underscoring
role
events
structuring
biogeographic
patterns.
Furthermore,
found
endothermic
ectothermic
response
temperature
precipitation,
highlighting
pivotal
thermal
physiology
shaping
dynamics.
By
illuminating
multifaceted
underpinning
patterns,
our
study
represents
significant
advancement
towards
effective
holistic
conservation
approaches
that
crucial
facing
ongoing
challenges.
Proceedings of the National Academy of Sciences,
Journal Year:
2023,
Volume and Issue:
120(30)
Published: July 17, 2023
Assessing
the
distribution
of
geographically
restricted
and
evolutionarily
unique
species
their
underlying
drivers
is
key
to
understanding
biogeographical
processes
critical
for
global
conservation
prioritization.
Here,
we
quantified
geographic
phylogenetic
endemism
~320,000
seed
plants
worldwide
identified
centers
young
(neoendemism)
old
(paleoendemism).
Tropical
subtropical
islands
as
well
tropical
mountain
regions
displayed
world's
highest
endemism.
Most
rainforest
emerged
paleoendemism,
while
most
Mediterranean-climate
showed
high
neoendemism.
Centers
where
neo-
paleoendemism
coincide
on
some
oceanic
continental
fragment
islands,
in
parts
Irano-Turanian
floristic
region.
Global
variation
was
explained
by
a
combination
past
present
environmental
factors
(79.8
87.7%
variance
explained)
strongly
related
heterogeneity.
Also,
warm
wet
climates,
isolation,
long-term
climatic
stability
Neo-
were
jointly
geological
history.
Long-term
promoted
persistence
paleoendemics,
isolation
histories
Mountainous
both
reflecting
diversification
over
time.
Our
study
provides
insights
into
evolutionary
underpinnings
patterns
identifies
areas
Earth
with
uniqueness-key
information
setting
priorities.
Plants,
Journal Year:
2023,
Volume and Issue:
12(14), P. 2640 - 2640
Published: July 13, 2023
The
Mediterranean
islands
are
exceptionally
rich
in
endemism,
most
of
which
is
narrowly
distributed.
Conservation
measures,
such
as
protected
areas,
have
been
prioritised,
mainly
on
the
basis
species
richness
and
but
phylogenetic
information
should
also
be
taken
into
account.
In
this
study,
we
calculated
several
taxonomic
metrics
at
a
high
resolution
for
endemic
flora
Balearic
Islands
(154
taxa),
order
to
identify
(i)
spatial
patterns
environmental
factors
that
explain
(ii)
hotspots
(iii)
gaps
areas.
showed
different
distribution
patterns,
mountainous
areas
Mallorca,
some
coastal
Islands,
highest
values.
These
values
were
positively
related
elevation,
precipitation,
temperature,
slope,
negatively
distance
from
coast,
aspect,
temperature
wettest
quarter.
We
identified
top
grid
where
all
had
values,
nano-hotspots
within
these
hotspots,
peaks
metrics'
maximum
coincided.
This
approach
allowed
us
conservation
priority
highlight
need
review
their
boundaries
definition.
BioScience,
Journal Year:
2025,
Volume and Issue:
unknown
Published: March 28, 2025
Abstract
Natural
history
collections
play
a
crucial
role
in
our
understanding
of
biodiversity,
informing
research,
management,
and
policy
areas
such
as
biosecurity,
conservation,
climate
change,
food
security.
However,
the
growing
volume
specimens
associated
data
presents
significant
challenges
for
curation
management.
By
leveraging
human–AI
collaborations,
we
aim
to
transform
way
biological
are
curated
managed,
realizing
their
full
potential
addressing
global
challenges.
In
this
article,
discuss
vision
improving
management
using
collaboration.
We
explore
rationale
behind
approach,
faced
general
problems,
benefits
that
could
be
derived
from
incorporating
AI-based
assistants
collection
teams.
Finally,
examine
future
possibilities
collaborations
between
human
digital
curators
collection-based
research.
Botanical Sciences,
Journal Year:
2025,
Volume and Issue:
103(3)
Published: May 3, 2025
Background:
Biodiversity
is
described
considering
its
alpha
(local
taxon
richness),
beta
(difference
of
taxa
between
localities),
or
gamma
(regional
richness)
components.
We
assessed
the
component
using
different
facets,
taxonomic
and
phylogenetic.
In
Mexico,
more
than
half
genera
Heliantheae
tribe
are
included
in
a
phylogeny,
taxonomically
curated
geographic
database
available,
facilitating
their
study
under
these
concepts.
Question:
Where
greatest
diversity
concentrated
Mexico
from
phylogenetic
perspective?
Data
description:
Geographic
data
75
(gamma
diversity)
phylogeny
including
45
Mexican
genera.
Study
site:
divided
into
grid
253
cells
1°
latitude
longitude.
Methods:
analyzed
22,166
records
for
to
determine
richness
weighted
endemism.
Phylogenetic
endemism
were
evaluated
13,251
molecular
obtained
with
U.PhyloMaker.
performed
maps
Biodiverse
QGIS
programs.
Results:
Twenty
high
values
identified,
11
placed
mountainous
regions
nine
arid
semiarid
areas.
A
correlation
exists
diversity.
Conclusions:
Including
missing
could
change
biogeographic
patterns
All
indices
necessary
select
priority
areas
conservation
associated
biodiversity.
Botanical Journal of the Linnean Society,
Journal Year:
2025,
Volume and Issue:
unknown
Published: March 30, 2025
Abstract
Studying
spatial
patterns
of
biodiversity
allows
us
to
infer
how
different
ecological
and
evolutionary
processes
have
interacted,
but
also
understand
its
current
distribution
in
order
preserve
it.
The
Argentinian
flora
is
rich
diverse
due
the
variety
environments
that
country
includes.
It
has
traditionally
been
classified
into
phytogeographical
provinces,
this
being
one
most
widely
used
bioregionalization
schemes
Argentina.
Since
these
provinces
reflect
both
historical
dimensions,
we
propose
analyse
their
angiosperm
phylogenetic
diversity
using
measures
structure.
results
show
divergence
was
generally
lower
with
cold
dry
climates
(e.g.
Puna,
Monte,
Patagonia,
Altoandina).
Conversely,
warm
humid
subtropical
Paranaense,
Yungas,
Chaco),
phylodiversity
levels
were
higher.
Although
agree
‘tropical
niche
conservatism’
hypothesis,
higher
found
Subantarctica
province,
consistent
here
‘Austral
hypothesis.
Differences
timescales
over
which
accumulates,
distinguishing
Yungas
from
Paranaense
provinces.
This
study
aims
contribute
knowledge
Argentine
Southern
Cone
flora.
PeerJ,
Journal Year:
2024,
Volume and Issue:
12, P. e16664 - e16664
Published: Jan. 2, 2024
The
niche
conservatism
hypothesis
postulates
that
physiological
and
phylogenetic
factors
constrain
species
distributions,
creating
richness
hotspots
with
older
lineages
in
ancestral
climatic
conditions.
Conversely,
convergence
occurs
when
successfully
disperse
to
novel
environments,
diversifying
resulting
areas
high
clustering
endemism,
low
diversity,
lower
clade
age.
Mexican
Transition
Zone
exhibits
both
patterns
as
its
biotic
assembly
resulted
from
successive
dispersal
events
of
different
elements
called
cenocrons.
We
test
the
biogeographic
transitionallity
area
is
a
product
Nearctic
Typical
Neotropical
cenocrons
Mountain
Mesoamerican
cenocron.
Journal of Biogeography,
Journal Year:
2023,
Volume and Issue:
50(8), P. 1405 - 1408
Published: July 8, 2023
and
macroecology
originated
in
a
novel
top-down
statistical
view
(Brown
&
Maurer,
1989),
to
name
but
few.We
are
an
age
of
innovationduringwhichtherapidemergenceofnewtechniquescan
provide
unparalleled
information
from
the
smallest
largest
spatial
scales,
individuals
communities,
seconds
tomillennia.Moreover,acquireddataaremorenumerousandmore
accessiblethaneverbefore-evenbeyondtraditionalresearchcommunities,
many
cases
unprecedentedly
vast
increasingly
globalepistemiccommunities-andtheorymorerefined.
Royal Society Open Science,
Journal Year:
2023,
Volume and Issue:
10(10)
Published: Oct. 1, 2023
Colombia,
renowned
as
an
important
centre
of
global
biodiversity,
continues
to
harbour
undiscovered
evolutionary
hotspots
flowering
plants.
The
altitude-dependent
hypothesis
suggests
that
richness
patterns
are
determined
by
altitude
and
probably
influenced
climate
variables.
This
study
employs
null
models
based
on
a
species-level
phylogeny
Colombia's
plants
their
geographical
distributions
identify
hotspots.
We
explore
the
potential
correlation
between
elevation,
variables
such
temperature
rainfall,
location
nature
these
findings
reveal
cradles,
which
house
young
endemic
species,
predominantly
located
in
mountainous
regions
Andes.
Conversely,
museums,
hosting
older
found
lowland
spanning
Caribbean,
Orinoco,
Amazon
Pacific
areas.
These
results
demonstrate
clear
elevational
segregation
hotspots,
primarily
temperature,
thereby
supporting
under
examination.
Furthermore,
this
identifies
previously
unrecognized
regions,
highlighting
limited
understanding
biodiversity
distribution
history.
Journal of Biogeography,
Journal Year:
2023,
Volume and Issue:
51(2), P. 230 - 245
Published: Oct. 17, 2023
Abstract
Aim
The
Eastern
Afromontane
Biodiversity
Hotspot
(EABH)
offers
an
ideal
location
to
investigate
the
evolutionary
mechanisms
producing
a
high
level
of
endemic
biodiversity.
We
tested
hypothesis
that
cradle
diversity
is
in
largest
sub‐region
EABH
montane
archipelago,
Ethiopian
Highlands.
Further,
we
expected
climate
oscillations
followed
by
elevational
shifts
habitats
facilitated
dispersal
small
mammal
populations
across
unsuitable
arid
lowlands.
Location
Mountains
and
highlands
East
Africa.
Taxon
Shrews
genus
Crocidura
(Eastern
phylogenetic
clade).
Methods
collected
comprehensive
genetic
data
from
511
(mitochondrial
gene
for
cytochrome
b
)
147
(double
digest
Restriction‐Associated
DNA
sequencing)
samples
shrews
EABH.
estimated
relationships
with
Bayesian
Maximum
Likelihood
approaches.
Population
analyses
were
performed
STRUCTURE
evaluate
internal
structure
species
outside
Ethiopia.
Ancestral
area
routes
analysed
BioGeoBears
package.
Results
Six
major
phylogenomic
clades
delimited
based
on
concatenated
nuclear
loci.
mitochondrial
phylogeny
roughly
matches
phylogenies,
but
poorer
resolution.
Five
six
revealed
are
restricted
Highlands,
which
unambiguously
this
group
mammals
(also
confirmed
biogeographic
analysis).
All
non‐Ethiopian
single
fall
into
sixth
clade
poorly
resolved
relationships.
Detailed
population
analysis
SNP
pronounced
multiple
pools
clade;
however,
only
partly
corresponds
current
taxonomy.
Main
Conclusions
originated
They
radiated
there,
through
southward
event
Turkana
depression,
they
colonised
rest
response
diverse
geomorphology
climatic
changes
during
Plio‐Pleistocene.
Journal of Biogeography,
Journal Year:
2023,
Volume and Issue:
50(8), P. 1373 - 1376
Published: July 8, 2023
While
theseshortfallsareincreasinglyobvious-skimmingjustthisjournal's
pageswillquicklyillustratepublishedpapersarenotrepresentative
of
the
full
spatial
diversity
important
biogeographical
questions,
nor
people
who
might
ask
them-our
ability
to
fill
gaps
remainslimitedbecauseopportunityandresourcesalsoareunevenly
distributed.Addressingtheseshortfallsisanessentialconsideration
forthefutureofbiogeography.Self-