The need for an integrated multi‐OMICs approach in microbiome science in the food system DOI Creative Commons
Ilario Ferrocino, Kalliopi Rantsiou, Ryan McClure

et al.

Comprehensive Reviews in Food Science and Food Safety, Journal Year: 2023, Volume and Issue: 22(2), P. 1082 - 1103

Published: Jan. 12, 2023

Microbiome science as an interdisciplinary research field has evolved rapidly over the past two decades, becoming a popular topic not only in scientific community and among general public, but also food industry due to growing demand for microbiome-based technologies that provide added-value solutions. expanded context of systems, strongly driven by methodological advances different -omics fields leverage our understanding microbial diversity function. However, managing integrating complex layers are still challenging. Within Coordinated Support Action MicrobiomeSupport (https://www.microbiomesupport.eu/), project supported European Commission, workshop "Metagenomics, Metaproteomics Metabolomics: need data integration microbiome research" gathered 70 participants from relevant discuss challenges promote switch descriptive studies functional studies, elucidating biology interactive roles microbiomes systems. A combination is proposed. This will reduce biases resulting each individual technology result more comprehensive view biological system whole. Although combinations datasets rare, advanced bioinformatics tools artificial intelligence approaches can contribute understanding, prediction, management microbiome, thereby providing basis improvement quality safety.

Language: Английский

Climate change impacts on plant pathogens, food security and paths forward DOI Open Access
Brajesh K. Singh, Manuel Delgado‐Baquerizo, Eleonora Egidi

et al.

Nature Reviews Microbiology, Journal Year: 2023, Volume and Issue: 21(10), P. 640 - 656

Published: May 2, 2023

Language: Английский

Citations

561
Soil microbiomes and one health DOI
Samiran Banerjee, Marcel G. A. van der Heijden

Nature Reviews Microbiology, Journal Year: 2022, Volume and Issue: 21(1), P. 6 - 20

Published: Aug. 23, 2022

Language: Английский

Citations

489
Plant–microbiome interactions under a changing world: responses, consequences and perspectives DOI Creative Commons
Pankaj Trivedi, Bruna Durante Batista, Kathryn E. Bazany

et al.

New Phytologist, Journal Year: 2022, Volume and Issue: 234(6), P. 1951 - 1959

Published: Feb. 4, 2022

Summary Climate change is increasing global temperatures and the frequency severity of droughts in many regions. These anthropogenic stresses pose a significant threat to plant performance crop production. The plant‐associated microbiome modulates impacts biotic abiotic on fitness. However, climate change‐induced alteration composition activities microbiomes can affect host functions. Here, we highlight recent advancements our understanding impact (warming drought) plant–microbiome interactions their ecological functions from genome ecosystem scales. We identify knowledge gaps, propose new concepts make recommendations for future research directions. It proposed that short term (years decades), adaptation plants mainly driven by microbiome, whereas long (century millennia), will be equally eco‐evolutionary between its host. A better response ways which mitigate negative inform predictions primary productivity aid developing management policy tools improve resilience systems.

Language: Английский

Citations

334
Managing Land Carrying Capacity: Key to Achieving Sustainable Production Systems for Food Security DOI Creative Commons
Xiukang Wang

Land, Journal Year: 2022, Volume and Issue: 11(4), P. 484 - 484

Published: March 27, 2022

Many previous studies have estimated the carrying capacity and feasible planetary boundaries for humankind. However, less attention has been given to how we will sustainably feed 9 billion people in 2050 beyond. Here, review major natural resources that limit food production discuss possible options, measures, strategies a human population of Currently, greatly depends on external inputs, e.g., irrigation water fertilizers, but these approaches are not sustainable. Due unbalanced distribution global large regional differences, urbanization expansion causes important areas face more serious arable land resource shortages. Hence, feeding beyond remains an immense challenge humankind, this requires novel planning better decision-making tools. Importantly, measures employed must be region-/country-specific because significant differences socioeconomic characteristics environmental different parts world. Considering impact unexpected extreme events (e.g., pandemic war) future, trade translocation goods also challenges, processes consider influences at both scales.

Language: Английский

Citations

162
Microbiome as a Key Player in Sustainable Agriculture and Human Health DOI Creative Commons
Jarupula Suman, Amitava Rakshit,

Siva Devika Ogireddy

et al.

Frontiers in Soil Science, Journal Year: 2022, Volume and Issue: 2

Published: April 11, 2022

The aggregate of microorganisms in the soil environment is a microbiome that emerged as vital component sustainable agriculture recent past. These beneficial perform multiple plant growth-promoting activities including fixation, mineralization, solubilization, and mobilization nutrients, production siderophores, antagonistic substances, antibiotics, release such auxin gibberellin hormones, mediated by interactions between host roots microbes rhizosphere. Numerous species forms symbiotic association with draw benefit mineral nutrient supply expense minimal energy, their distribution governed nature number root exudates, crop species, cultivars. On other hand, critical roles can be isolated, formulated, developed new biological product called biofertilizers. Agriculturally, important Fe- Zn-solubilizing attributes used for biofortification micronutrients different cereal crops. Regardless approach to used, innovations use microbiomes represent future agriculture. Probiotic microbes, Lactobacillus, etc., are increasingly being dietary supplements functional food products. Effective utilization aids promoting accomplishes safe environment, which turn manifests positively on human health.

Language: Английский

Citations

134
Legacies at work: plant–soil–microbiome interactions underpinning agricultural sustainability DOI

Jingying Jing,

Wen‐Feng Cong, Т. Martijn Bezemer

et al.

Trends in Plant Science, Journal Year: 2022, Volume and Issue: 27(8), P. 781 - 792

Published: June 11, 2022

Language: Английский

Citations

125
Biopesticides in Sustainable Agriculture: A Critical Sustainable Development Driver Governed by Green Chemistry Principles DOI Creative Commons
Emmanuel O. Fenibo, Grace N. Ijoma, Tonderayi S. Matambo

et al.

Frontiers in Sustainable Food Systems, Journal Year: 2021, Volume and Issue: 5

Published: June 11, 2021

OPINION article Front. Sustain. Food Syst., 11 June 2021Sec. Agroecology and Ecosystem Services https://doi.org/10.3389/fsufs.2021.619058

Language: Английский

Citations

123
Importance of Bacteroidetes in host–microbe interactions and ecosystem functioning DOI

Xinya Pan,

Jos M. Raaijmakers, Víctor J. Carrión

et al.

Trends in Microbiology, Journal Year: 2023, Volume and Issue: 31(9), P. 959 - 971

Published: May 10, 2023

Language: Английский

Citations

92
Application of microbial inoculants significantly enhances crop productivity: A meta‐analysis of studies from 2010 to 2020 DOI Creative Commons
Jiayu Li, Juntao Wang, Hongwei Liu

et al.

Journal of Sustainable Agriculture and Environment, Journal Year: 2022, Volume and Issue: 1(3), P. 216 - 225

Published: Aug. 27, 2022

Abstract Introduction With the rapid development of microbial technology, inoculant is considered as a promising tool in sustainable agricultural systems. Mechanisms by which inoculants improve crop yield include improving plant nutrient availability and alleviating abiotic/biotic stresses (e.g., drought, salt disease). However, field efficacy remains inconsistent, constrains large‐scale adoptions. Identity dominant mechanisms that underpin positive impacts different limited. Thus, comprehensive quantitative assessment known on performance needed to provide guidance for effective tools from both research commercial perspectives. Materials Methods Based 97 peer‐reviewed publications, we conducted meta‐analysis quantify benefits yield, identify key enhanced yield. Results Result showed (i) alleviation was major mechanism (53.95%, n = 53) enhance while accounted 22.25% ( 58) enhancement. (ii) Pseudomonas most enhancing through (63.91%, 15), whereas Enterobacter (27.12%, 5). (iii) Considering together, (49.94%, 21), (27.55%, 13) Bacillus (25.66%, 32) were largest sources combination diazotroph Burkholderia with its legume host had highest effect (by 196.38%). Microbial also nutritional quality mineral contents produce. Conclusion Our analysis provides evidence can productivity be used either alone or reduced amount agrochemicals promote agriculture.

Language: Английский

Citations

70
Emerging Pathways for Engineering the Rhizosphere Microbiome for Optimal Plant Health DOI
Shengdie Yang, Hongwei Liu,

Penghao Xie

et al.

Journal of Agricultural and Food Chemistry, Journal Year: 2023, Volume and Issue: 71(11), P. 4441 - 4449

Published: March 8, 2023

The increasing impacts of global climate change on crop performance pose a significant threat to food security. rhizosphere microbiomes intimately interact with the plant and can largely facilitate plants in growth promotion stress resistance via multiple mechanisms. This review focuses approaches for harnessing produce beneficial effects toward enhanced productivity, including use organic inorganic amendments, microbial inoculants. Emerging methods, such as utilization synthetic consortia, host-mediated microbiome engineering, prebiotics made from specific root exudates, breeding promote plant–microbiome interactions, are highlighted. Updating our knowledge this field is critical understanding improving thereby enhancing adaptiveness changing environmental conditions.

Language: Английский

Citations

55